RNA–Protein interactions for RNA: ENST00000541110.5

TRERF1-205, Transcript of transcriptional regulating factor 1, humanhuman

TSL 1 (best) BASIC

Gene TRERF1, Length 7,646 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-205ENST00000541110 DPF3Q92784 378 aa10.7□□□□□ -0.7
TRERF1-205ENST00000541110 EPB42P16452 691 aa10.7□□□□□ -0.7
TRERF1-205ENST00000541110 SMARCA1P28370 1054 aa10.7□□□□□ -0.7
TRERF1-205ENST00000541110 PLTPP55058 493 aa10.7□□□□□ -0.7
TRERF1-205ENST00000541110 DMC1Q14565 340 aa10.7□□□□□ -0.7
TRERF1-205ENST00000541110 FAM133BQ5BKY9 247 aaKnown RBP10.7□□□□□ -0.7
TRERF1-205ENST00000541110 C16orf87Q6PH81 154 aa10.7□□□□□ -0.7
TRERF1-205ENST00000541110 LVRNQ6Q4G3 990 aa10.7□□□□□ -0.7
TRERF1-205ENST00000541110 XPO4Q9C0E2 1151 aaKnown RBP10.7□□□□□ -0.7
TRERF1-205ENST00000541110 WARS2Q9UGM6 360 aaKnown RBP10.7□□□□□ -0.7
TRERF1-205ENST00000541110 MID2Q9UJV3 735 aa10.7□□□□□ -0.7
TRERF1-205ENST00000541110 NEURL1BA8MQ27 555 aa10.7□□□□□ -0.7
TRERF1-205ENST00000541110 SKIP12755 728 aa10.7□□□□□ -0.7
TRERF1-205ENST00000541110 TNFAIP2Q03169 654 aa10.7□□□□□ -0.7
TRERF1-205ENST00000541110 SNCBQ16143 134 aa10.7□□□□□ -0.7
TRERF1-205ENST00000541110 RINLQ6ZS11 566 aa10.7□□□□□ -0.7
TRERF1-205ENST00000541110 FAM133AQ8N9E0 248 aa10.7□□□□□ -0.7
TRERF1-205ENST00000541110 FBXO41Q8TF61 875 aa10.7□□□□□ -0.7
TRERF1-205ENST00000541110 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.7□□□□□ -0.76e-7■■■■■ 58.6
TRERF1-205ENST00000541110 KLHL29Q96CT2 875 aa10.7□□□□□ -0.7
TRERF1-205ENST00000541110 PPP1R13BQ96KQ4 1090 aa10.7□□□□□ -0.7
TRERF1-205ENST00000541110 CLIC6Q96NY7 704 aa10.7□□□□□ -0.7
TRERF1-205ENST00000541110 SMAD5Q99717 465 aaKnown RBP10.7□□□□□ -0.7
TRERF1-205ENST00000541110 MUC3BQ9H195 1237 aa10.7□□□□□ -0.7
TRERF1-205ENST00000541110 DMAP1Q9NPF5 467 aaPredicted RBP10.7□□□□□ -0.7
TRERF1-205ENST00000541110 C5orf58C9J3I9 102 aa10.7□□□□□ -0.7
TRERF1-205ENST00000541110 TJP3O95049 919 aa10.7□□□□□ -0.7
TRERF1-205ENST00000541110 UBE2SQ16763 222 aa10.7□□□□□ -0.7
TRERF1-205ENST00000541110 MAP3K19Q56UN5 1328 aa10.7□□□□□ -0.7
TRERF1-205ENST00000541110 RNF123Q5XPI4 1314 aa10.7□□□□□ -0.7
TRERF1-205ENST00000541110 CCDC195A0A1B0GUA6 201 aa10.7□□□□□ -0.7
TRERF1-205ENST00000541110 CARSP49589 748 aaKnown RBP10.7□□□□□ -0.7
TRERF1-205ENST00000541110 ACAD11Q709F0 780 aa10.7□□□□□ -0.7
TRERF1-205ENST00000541110 HS6ST3Q8IZP7 471 aa10.7□□□□□ -0.7
TRERF1-205ENST00000541110 DSCC1Q9BVC3 393 aa10.7□□□□□ -0.7
TRERF1-205ENST00000541110 DNAJC17Q9NVM6 304 aaKnown RBP10.7□□□□□ -0.7
TRERF1-205ENST00000541110 SYCP2Q9BX26 1530 aa10.7□□□□□ -0.7
TRERF1-205ENST00000541110 LOC102724428A0A0B4J2F2 783 aa10.7□□□□□ -0.7
TRERF1-205ENST00000541110 SIK1P57059 783 aa10.7□□□□□ -0.7
TRERF1-205ENST00000541110 COPS2P61201 443 aa10.7□□□□□ -0.7
TRERF1-205ENST00000541110 TTLL4Q14679 1199 aa10.7□□□□□ -0.7
TRERF1-205ENST00000541110 C11orf74Q86VG3 221 aa10.7□□□□□ -0.7
TRERF1-205ENST00000541110 ANKRD13CQ8N6S4 541 aa10.7□□□□□ -0.7
TRERF1-205ENST00000541110 SLC25A13Q9UJS0 675 aa10.7□□□□□ -0.7
TRERF1-205ENST00000541110 PCDHA4Q9UN74 947 aa10.7□□□□□ -0.7
TRERF1-205ENST00000541110 TBC1D12O60347 775 aa10.69□□□□□ -0.7
TRERF1-205ENST00000541110 VAMP4O75379 141 aa10.69□□□□□ -0.7
TRERF1-205ENST00000541110 ZMYND10O75800 440 aa10.69□□□□□ -0.7
TRERF1-205ENST00000541110 LCP1P13796 627 aa10.69□□□□□ -0.7
TRERF1-205ENST00000541110 PFKFB1P16118 471 aa10.69□□□□□ -0.7
TRERF1-205ENST00000541110 SSTR3P32745 418 aaPredicted RBP10.69□□□□□ -0.7
TRERF1-205ENST00000541110 EFTUD2Q15029 972 aaKnown RBP eCLIP10.69□□□□□ -0.7
TRERF1-205ENST00000541110 ADCK5Q3MIX3 580 aa10.69□□□□□ -0.7
TRERF1-205ENST00000541110 BBS9Q3SYG4 887 aa10.69□□□□□ -0.7
TRERF1-205ENST00000541110 ZNF667Q5HYK9 610 aa10.69□□□□□ -0.7
TRERF1-205ENST00000541110 SLFN12LQ6IEE8 588 aa10.69□□□□□ -0.7
TRERF1-205ENST00000541110 PPP1R2P3Q6NXS1 205 aa10.69□□□□□ -0.7
TRERF1-205ENST00000541110 HES6Q96HZ4 224 aa10.69□□□□□ -0.7
TRERF1-205ENST00000541110 PAPOLBQ9NRJ5 636 aaKnown RBP10.69□□□□□ -0.7
TRERF1-205ENST00000541110 PCDHB7Q9Y5E2 793 aa10.69□□□□□ -0.7
TRERF1-205ENST00000541110 GRAMD1BQ3KR37 738 aa10.69□□□□□ -0.7
TRERF1-205ENST00000541110 SPATA2LQ8IUW3 424 aaPredicted RBP10.69□□□□□ -0.7
TRERF1-205ENST00000541110 C10orf53Q8N6V4 93 aa10.69□□□□□ -0.7
TRERF1-205ENST00000541110 CCDC51Q96ER9 411 aa10.69□□□□□ -0.7
TRERF1-205ENST00000541110 OTUD5Q96G74 571 aa10.69□□□□□ -0.7
TRERF1-205ENST00000541110 PPP1R36Q96LQ0 422 aa10.69□□□□□ -0.7
TRERF1-205ENST00000541110 KANSL2Q9H9L4 492 aa10.69□□□□□ -0.7
TRERF1-205ENST00000541110 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.69□□□□□ -0.7
TRERF1-205ENST00000541110 A2MP01023 1474 aa10.69□□□□□ -0.7
TRERF1-205ENST00000541110 SFI1A8K8P3 1242 aa10.69□□□□□ -0.7
TRERF1-205ENST00000541110 FCER1AP12319 257 aa10.69□□□□□ -0.7
TRERF1-205ENST00000541110 CTTNQ14247 550 aaKnown RBP10.69□□□□□ -0.7
TRERF1-205ENST00000541110 MORF4L2Q15014 288 aa10.69□□□□□ -0.7
TRERF1-205ENST00000541110 GPBP1L1Q9HC44 474 aaPredicted RBP10.69□□□□□ -0.7
TRERF1-205ENST00000541110 YEATS2Q9ULM3 1422 aa10.69□□□□□ -0.7
TRERF1-205ENST00000541110 DUOX2Q9NRD8 1548 aa10.69□□□□□ -0.7
TRERF1-205ENST00000541110 CCDC151A5D8V7 595 aa10.69□□□□□ -0.7
TRERF1-205ENST00000541110 VCAM1P19320 739 aa10.69□□□□□ -0.7
TRERF1-205ENST00000541110 ADORA2BP29275 332 aa10.69□□□□□ -0.7
TRERF1-205ENST00000541110 C17orf53Q8N3J3 647 aaPredicted RBP10.69□□□□□ -0.7
TRERF1-205ENST00000541110 EDC3Q96F86 508 aaKnown RBP10.69□□□□□ -0.7
TRERF1-205ENST00000541110 SPATA33Q96N06 139 aa10.69□□□□□ -0.7
TRERF1-205ENST00000541110 TSEN34Q9BSV6 310 aaKnown RBP10.69□□□□□ -0.7
TRERF1-205ENST00000541110 HOXC10Q9NYD6 342 aa10.69□□□□□ -0.7
TRERF1-205ENST00000541110 NBPF26B4DH59 902 aa10.69□□□□□ -0.7
TRERF1-205ENST00000541110 MRPL28Q13084 256 aaKnown RBP10.69□□□□□ -0.7
TRERF1-205ENST00000541110 MTMR1Q13613 665 aa10.69□□□□□ -0.7
TRERF1-205ENST00000541110 ZNF235Q14590 738 aa10.69□□□□□ -0.7
TRERF1-205ENST00000541110 USP17L2Q6R6M4 530 aa10.69□□□□□ -0.7
TRERF1-205ENST00000541110 OR6J1Q8NGC5 347 aa10.69□□□□□ -0.7
TRERF1-205ENST00000541110 OR6P1Q8NGX9 317 aa10.69□□□□□ -0.7
TRERF1-205ENST00000541110 SPATS2LQ9NUQ6 558 aaKnown RBP10.69□□□□□ -0.7
TRERF1-205ENST00000541110 SH3BP1Q9Y3L3 701 aa10.69□□□□□ -0.7
TRERF1-205ENST00000541110 SNX5Q9Y5X3 404 aa10.69□□□□□ -0.7
TRERF1-205ENST00000541110 ZFYVE9O95405 1425 aa10.69□□□□□ -0.7
TRERF1-205ENST00000541110 ZNF197O14709 1029 aa10.68□□□□□ -0.7
TRERF1-205ENST00000541110 TRPC1P48995 793 aa10.68□□□□□ -0.7
TRERF1-205ENST00000541110 MAPK6Q16659 721 aa10.68□□□□□ -0.7
TRERF1-205ENST00000541110 CENPUQ71F23 418 aa10.68□□□□□ -0.7
TRERF1-205ENST00000541110 TBCKQ8TEA7 893 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms