RNA–Protein interactions for RNA: ENST00000540057.1

C2CD3-214, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 4

Gene C2CD3, Length 556 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-214ENST00000540057 NKX2-4Q9H2Z4 354 aa4.89□□□□□ -1.63
C2CD3-214ENST00000540057 MYH16Q9H6N6 1097 aa4.89□□□□□ -1.63
C2CD3-214ENST00000540057 CARS2Q9HA77 564 aaKnown RBP4.89□□□□□ -1.63
C2CD3-214ENST00000540057 DDX4Q9NQI0 724 aaKnown RBP4.89□□□□□ -1.63
C2CD3-214ENST00000540057 YBX2Q9Y2T7 364 aaKnown RBP4.89□□□□□ -1.63
C2CD3-214ENST00000540057 AK5Q9Y6K8 562 aa4.89□□□□□ -1.63
C2CD3-214ENST00000540057 MYBBP1AQ9BQG0 1328 aaKnown RBP4.89□□□□□ -1.63
C2CD3-214ENST00000540057 CACNA1AO00555 2505 aa4.89□□□□□ -1.63
C2CD3-214ENST00000540057 PRRC2BQ5JSZ5 2229 aaKnown RBP4.88□□□□□ -1.63
C2CD3-214ENST00000540057 MYH2Q9UKX2 1941 aa4.88□□□□□ -1.63
C2CD3-214ENST00000540057 H3BS24 57 aa4.88□□□□□ -1.63
C2CD3-214ENST00000540057 PQBP1O60828 265 aaKnown RBP4.88□□□□□ -1.63
C2CD3-214ENST00000540057 HOXC6P09630 235 aa4.88□□□□□ -1.63
C2CD3-214ENST00000540057 PRDX5P30044 214 aa4.88□□□□□ -1.63
C2CD3-214ENST00000540057 LIG3P49916 1009 aa4.88□□□□□ -1.63
C2CD3-214ENST00000540057 ETF1P62495 437 aaKnown RBP4.88□□□□□ -1.63
C2CD3-214ENST00000540057 TRIM26Q12899 539 aaPredicted RBP4.88□□□□□ -1.63
C2CD3-214ENST00000540057 RRP1BQ14684 758 aaKnown RBP4.88□□□□□ -1.63
C2CD3-214ENST00000540057 RAB30Q15771 203 aa4.88□□□□□ -1.63
C2CD3-214ENST00000540057 LCE4AQ5TA78 99 aa4.88□□□□□ -1.63
C2CD3-214ENST00000540057 MEI1Q5TIA1 1274 aa4.88□□□□□ -1.63
C2CD3-214ENST00000540057 CILP2Q8IUL8 1156 aa4.88□□□□□ -1.63
C2CD3-214ENST00000540057 CCAR1Q8IX12 1150 aaKnown RBP4.88□□□□□ -1.63
C2CD3-214ENST00000540057 SLC44A5Q8NCS7 719 aa4.88□□□□□ -1.63
C2CD3-214ENST00000540057 DUSP9Q99956 384 aaKnown RBP4.88□□□□□ -1.63
C2CD3-214ENST00000540057 PAGR1Q9BTK6 254 aa4.88□□□□□ -1.63
C2CD3-214ENST00000540057 KRTAP4-7Q9BYR0 210 aa4.88□□□□□ -1.63
C2CD3-214ENST00000540057 OSBPL5Q9H0X9 879 aaPredicted RBP4.88□□□□□ -1.63
C2CD3-214ENST00000540057 SLC28A3Q9HAS3 691 aa4.88□□□□□ -1.63
C2CD3-214ENST00000540057 MSRAQ9UJ68 235 aa4.88□□□□□ -1.63
C2CD3-214ENST00000540057 TPX2Q9ULW0 747 aaKnown RBP4.88□□□□□ -1.63
C2CD3-214ENST00000540057 COG5Q9UP83 839 aa4.88□□□□□ -1.63
C2CD3-214ENST00000540057 MTCH2Q9Y6C9 303 aa4.88□□□□□ -1.63
C2CD3-214ENST00000540057 SMCHD1A6NHR9 2005 aa4.88□□□□□ -1.63
C2CD3-214ENST00000540057 SLC15A5A6NIM6 579 aa4.87□□□□□ -1.63
C2CD3-214ENST00000540057 RFXAPO00287 272 aa4.87□□□□□ -1.63
C2CD3-214ENST00000540057 SEPT4O43236 478 aa4.87□□□□□ -1.63
C2CD3-214ENST00000540057 CNMDO75829 334 aa4.87□□□□□ -1.63
C2CD3-214ENST00000540057 PDE8BO95263 885 aa4.87□□□□□ -1.63
C2CD3-214ENST00000540057 TIMP1P01033 207 aa4.87□□□□□ -1.63
C2CD3-214ENST00000540057 ACRP10323 421 aa4.87□□□□□ -1.63
C2CD3-214ENST00000540057 CSF2RAP15509 400 aa4.87□□□□□ -1.63
C2CD3-214ENST00000540057 TFE3P19532 575 aaPredicted RBP4.87□□□□□ -1.63
C2CD3-214ENST00000540057 POU3F3P20264 500 aaPredicted RBP4.87□□□□□ -1.63
C2CD3-214ENST00000540057 PPIGQ13427 754 aaKnown RBP eCLIP4.87□□□□□ -1.63
C2CD3-214ENST00000540057 PICALMQ13492 652 aa4.87□□□□□ -1.63
C2CD3-214ENST00000540057 GRB14Q14449 540 aa4.87□□□□□ -1.63
C2CD3-214ENST00000540057 KCNMB1Q16558 191 aa4.87□□□□□ -1.63
C2CD3-214ENST00000540057 LRRC24Q50LG9 513 aa4.87□□□□□ -1.63
C2CD3-214ENST00000540057 FAM47AQ5JRC9 791 aa4.87□□□□□ -1.63
C2CD3-214ENST00000540057 CDKAL1Q5VV42 579 aa4.87□□□□□ -1.63
C2CD3-214ENST00000540057 MFSD5Q6N075 450 aa4.87□□□□□ -1.63
C2CD3-214ENST00000540057 SPOCD1Q6ZMY3 1216 aa4.87□□□□□ -1.63
C2CD3-214ENST00000540057 ZNF365Q70YC5 407 aa4.87□□□□□ -1.63
C2CD3-214ENST00000540057 ANKRD33Q7Z3H0 272 aa4.87□□□□□ -1.63
C2CD3-214ENST00000540057 MRPL41Q8IXM3 137 aaKnown RBP4.87□□□□□ -1.63
C2CD3-214ENST00000540057 VGLL2Q8N8G2 317 aa4.87□□□□□ -1.63
C2CD3-214ENST00000540057 WDR66Q8TBY9 1149 aa4.87□□□□□ -1.63
C2CD3-214ENST00000540057 DNAAF4Q8WXU2 420 aa4.87□□□□□ -1.63
C2CD3-214ENST00000540057 ANKS1AQ92625 1134 aa4.87□□□□□ -1.63
C2CD3-214ENST00000540057 RUNDC1Q96C34 613 aa4.87□□□□□ -1.63
C2CD3-214ENST00000540057 DPH2Q9BQC3 489 aaPredicted RBP4.87□□□□□ -1.63
C2CD3-214ENST00000540057 CHMP4AQ9BY43 222 aa4.87□□□□□ -1.63
C2CD3-214ENST00000540057 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.87□□□□□ -1.63
C2CD3-214ENST00000540057 IFT57Q9NWB7 429 aa4.87□□□□□ -1.63
C2CD3-214ENST00000540057 TMOD4Q9NZQ9 345 aa4.87□□□□□ -1.63
C2CD3-214ENST00000540057 TJP2Q9UDY2 1190 aa4.87□□□□□ -1.63
C2CD3-214ENST00000540057 MROH5Q6ZUA9 1318 aa4.87□□□□□ -1.63
C2CD3-214ENST00000540057 CFAP54Q96N23 3096 aa4.86□□□□□ -1.63
C2CD3-214ENST00000540057 A0A0G2JMZ2 1700 aa4.86□□□□□ -1.63
C2CD3-214ENST00000540057 A0A1W2PQ45 241 aaPredicted RBP4.86□□□□□ -1.63
C2CD3-214ENST00000540057 A0A1W2PQY0 241 aa4.86□□□□□ -1.63
C2CD3-214ENST00000540057 DBX1A6NMT0 343 aa4.86□□□□□ -1.63
C2CD3-214ENST00000540057 GLRX3O76003 335 aaKnown RBP4.86□□□□□ -1.63
C2CD3-214ENST00000540057 MYOGP15173 224 aa4.86□□□□□ -1.63
C2CD3-214ENST00000540057 FGFR2P21802 821 aa4.86□□□□□ -1.63
C2CD3-214ENST00000540057 ZEB1P37275 1124 aaPredicted RBP4.86□□□□□ -1.63
C2CD3-214ENST00000540057 RABGGTBP53611 331 aa4.86□□□□□ -1.63
C2CD3-214ENST00000540057 BACE1P56817 501 aa4.86□□□□□ -1.63
C2CD3-214ENST00000540057 GNAI1P63096 354 aa4.86□□□□□ -1.63
C2CD3-214ENST00000540057 METTL24Q5JXM2 366 aa4.86□□□□□ -1.63
C2CD3-214ENST00000540057 PRAMEF19Q5SWL8 479 aa4.86□□□□□ -1.63
C2CD3-214ENST00000540057 WDR78Q5VTH9 848 aa4.86□□□□□ -1.63
C2CD3-214ENST00000540057 OLFML2BQ68BL8 750 aa4.86□□□□□ -1.63
C2CD3-214ENST00000540057 KRT40Q6A162 431 aa4.86□□□□□ -1.63
C2CD3-214ENST00000540057 PSRC1Q6PGN9 363 aaPredicted RBP4.86□□□□□ -1.63
C2CD3-214ENST00000540057 CCDC174Q6PII3 467 aa4.86□□□□□ -1.63
C2CD3-214ENST00000540057 THAP5Q7Z6K1 395 aa4.86□□□□□ -1.63
C2CD3-214ENST00000540057 DNAJB8Q8NHS0 232 aa4.86□□□□□ -1.63
C2CD3-214ENST00000540057 LIN37Q96GY3 246 aaPredicted RBP4.86□□□□□ -1.63
C2CD3-214ENST00000540057 TOX2Q96NM4 488 aa4.86□□□□□ -1.63
C2CD3-214ENST00000540057 STK31Q9BXU1 1019 aa4.86□□□□□ -1.63
C2CD3-214ENST00000540057 AS3MTQ9HBK9 375 aa4.86□□□□□ -1.63
C2CD3-214ENST00000540057 CWC22Q9HCG8 908 aaKnown RBP4.86□□□□□ -1.63
C2CD3-214ENST00000540057 TBX21Q9UL17 535 aa4.86□□□□□ -1.63
C2CD3-214ENST00000540057 RABGAP1Q9Y3P9 1069 aa4.86□□□□□ -1.63
C2CD3-214ENST00000540057 GAKO14976 1311 aa4.86□□□□□ -1.63
C2CD3-214ENST00000540057 ZNF521Q96K83 1311 aa4.86□□□□□ -1.63
C2CD3-214ENST00000540057 KIF16BQ96L93 1317 aa4.86□□□□□ -1.63
C2CD3-214ENST00000540057 ZNF318Q5VUA4 2279 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms