RNA–Protein interactions for RNA: ENST00000539952.5

CPSF7-219, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 953 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-219ENST00000539952 A0A0D9SFI3 127 aa6.81□□□□□ -1.32
CPSF7-219ENST00000539952 GSTTP1A0A1W2PQM5 241 aa6.81□□□□□ -1.32
CPSF7-219ENST00000539952 B4E1Z4 1266 aa6.81□□□□□ -1.32
CPSF7-219ENST00000539952 FSCN2O14926 492 aa6.81□□□□□ -1.32
CPSF7-219ENST00000539952 GPR182O15218 404 aa6.81□□□□□ -1.32
CPSF7-219ENST00000539952 PDGFBP01127 241 aaPredicted RBP6.81□□□□□ -1.32
CPSF7-219ENST00000539952 INSRRP14616 1297 aa6.81□□□□□ -1.32
CPSF7-219ENST00000539952 MTHFRP42898 656 aa6.81□□□□□ -1.32
CPSF7-219ENST00000539952 PDE1AP54750 535 aa6.81□□□□□ -1.32
CPSF7-219ENST00000539952 NFX1Q12986 1120 aaKnown RBP6.81□□□□□ -1.32
CPSF7-219ENST00000539952 PAK2Q13177 524 aa6.81□□□□□ -1.32
CPSF7-219ENST00000539952 NMIQ13287 307 aaPredicted RBP6.81□□□□□ -1.32
CPSF7-219ENST00000539952 HSP90AA2PQ14568 343 aaPredicted RBP6.81□□□□□ -1.32
CPSF7-219ENST00000539952 IMMTQ16891 758 aaKnown RBP6.81□□□□□ -1.32
CPSF7-219ENST00000539952 ATAT1Q5SQI0 421 aa6.81□□□□□ -1.32
CPSF7-219ENST00000539952 MARCH8Q5T0T0 291 aa6.81□□□□□ -1.32
CPSF7-219ENST00000539952 LCE2DQ5TA82 110 aaPredicted RBP6.81□□□□□ -1.32
CPSF7-219ENST00000539952 ANKRD45Q5TZF3 282 aa6.81□□□□□ -1.32
CPSF7-219ENST00000539952 PCNX4Q63HM2 1172 aa6.81□□□□□ -1.32
CPSF7-219ENST00000539952 SYCE2Q6PIF2 218 aa6.81□□□□□ -1.32
CPSF7-219ENST00000539952 PADI6Q6TGC4 694 aa6.81□□□□□ -1.32
CPSF7-219ENST00000539952 SLC24A5Q71RS6 500 aa6.81□□□□□ -1.32
CPSF7-219ENST00000539952 FRMD5Q7Z6J6 570 aa6.81□□□□□ -1.32
CPSF7-219ENST00000539952 TBC1D10CQ8IV04 446 aa6.81□□□□□ -1.32
CPSF7-219ENST00000539952 ZDHHC14Q8IZN3 488 aa6.81□□□□□ -1.32
CPSF7-219ENST00000539952 TMEM105Q8N8V8 129 aa6.81□□□□□ -1.32
CPSF7-219ENST00000539952 OTUD7AQ8TE49 926 aaPredicted RBP6.81□□□□□ -1.32
CPSF7-219ENST00000539952 MRPS27Q92552 414 aaKnown RBP6.81□□□□□ -1.32
CPSF7-219ENST00000539952 GPRASP2Q96D09 838 aa6.81□□□□□ -1.32
CPSF7-219ENST00000539952 BORCS6Q96GS4 357 aa6.81□□□□□ -1.32
CPSF7-219ENST00000539952 NAP1L5Q96NT1 182 aaPredicted RBP6.81□□□□□ -1.32
CPSF7-219ENST00000539952 PIGSQ96S52 555 aa6.81□□□□□ -1.32
CPSF7-219ENST00000539952 AZI2Q9H6S1 392 aa6.81□□□□□ -1.32
CPSF7-219ENST00000539952 ELAC1Q9H777 363 aaKnown RBP6.81□□□□□ -1.32
CPSF7-219ENST00000539952 RRAGDQ9NQL2 400 aaPredicted RBP6.81□□□□□ -1.32
CPSF7-219ENST00000539952 RGS18Q9NS28 235 aa6.81□□□□□ -1.32
CPSF7-219ENST00000539952 TYW1Q9NV66 732 aaKnown RBP6.81□□□□□ -1.32
CPSF7-219ENST00000539952 MAD2L2Q9UI95 211 aa6.81□□□□□ -1.32
CPSF7-219ENST00000539952 USTQ9Y2C2 406 aa6.81□□□□□ -1.32
CPSF7-219ENST00000539952 PCDHGC5Q9Y5F6 944 aa6.81□□□□□ -1.32
CPSF7-219ENST00000539952 PCDHA2Q9Y5H9 948 aa6.81□□□□□ -1.32
CPSF7-219ENST00000539952 TRPV2Q9Y5S1 764 aa6.81□□□□□ -1.32
CPSF7-219ENST00000539952 NEDD4P46934 1319 aa6.8□□□□□ -1.32
CPSF7-219ENST00000539952 IGSF9BQ9UPX0 1349 aa6.8□□□□□ -1.32
CPSF7-219ENST00000539952 SMIM35A0A1B0GVV1 85 aa6.8□□□□□ -1.32
CPSF7-219ENST00000539952 DENND3A2RUS2 1198 aa6.8□□□□□ -1.32
CPSF7-219ENST00000539952 TBKBP1A7MCY6 615 aa6.8□□□□□ -1.32
CPSF7-219ENST00000539952 RBAK-RBAKDNI3L0D1 243 aa6.8□□□□□ -1.32
CPSF7-219ENST00000539952 K7ELQ4 463 aaPredicted RBP6.8□□□□□ -1.32
CPSF7-219ENST00000539952 HOXA2O43364 376 aa6.8□□□□□ -1.32
CPSF7-219ENST00000539952 PPP1R11O60927 126 aaPredicted RBP6.8□□□□□ -1.32
CPSF7-219ENST00000539952 RPS6KA5O75582 802 aa6.8□□□□□ -1.32
CPSF7-219ENST00000539952 BRD1O95696 1058 aa6.8□□□□□ -1.32
CPSF7-219ENST00000539952 LAG3P18627 525 aa6.8□□□□□ -1.32
CPSF7-219ENST00000539952 SDSP20132 328 aa6.8□□□□□ -1.32
CPSF7-219ENST00000539952 FAM189BP81408 668 aa6.8□□□□□ -1.32
CPSF7-219ENST00000539952 KRT76Q01546 638 aa6.8□□□□□ -1.32
CPSF7-219ENST00000539952 SP4Q02446 784 aa6.8□□□□□ -1.32
CPSF7-219ENST00000539952 SEMA3FQ13275 785 aa6.8□□□□□ -1.32
CPSF7-219ENST00000539952 PUM1Q14671 1186 aaKnown RBP eCLIP6.8□□□□□ -1.32
CPSF7-219ENST00000539952 RABEP1Q15276 862 aa6.8□□□□□ -1.32
CPSF7-219ENST00000539952 FAM102BQ5T8I3 360 aa6.8□□□□□ -1.32
CPSF7-219ENST00000539952 CASC1Q6TDU7 716 aa6.8□□□□□ -1.32
CPSF7-219ENST00000539952 PLPPR4Q7Z2D5 763 aa6.8□□□□□ -1.32
CPSF7-219ENST00000539952 DGLUCYQ7Z3D6 616 aa6.8□□□□□ -1.32
CPSF7-219ENST00000539952 TMC7Q7Z402 723 aa6.8□□□□□ -1.32
CPSF7-219ENST00000539952 ZNF589Q86UQ0 364 aaPredicted RBP6.8□□□□□ -1.32
CPSF7-219ENST00000539952 TRIM50Q86XT4 487 aa6.8□□□□□ -1.32
CPSF7-219ENST00000539952 HOMER1Q86YM7 354 aa6.8□□□□□ -1.32
CPSF7-219ENST00000539952 COLGALT1Q8NBJ5 622 aa6.8□□□□□ -1.32
CPSF7-219ENST00000539952 VN1R2Q8NFZ6 395 aa6.8□□□□□ -1.32
CPSF7-219ENST00000539952 SMARCC2Q8TAQ2 1214 aa6.8□□□□□ -1.32
CPSF7-219ENST00000539952 KCNG4Q8TDN1 519 aa6.8□□□□□ -1.32
CPSF7-219ENST00000539952 LINC01599Q8WXQ3 324 aa6.8□□□□□ -1.32
CPSF7-219ENST00000539952 PPP1R9BQ96SB3 815 aa6.8□□□□□ -1.32
CPSF7-219ENST00000539952 MAP7D2Q96T17 732 aa6.8□□□□□ -1.32
CPSF7-219ENST00000539952 TCF25Q9BQ70 676 aa6.8□□□□□ -1.32
CPSF7-219ENST00000539952 ATP6V0A4Q9HBG4 840 aa6.8□□□□□ -1.32
CPSF7-219ENST00000539952 LIMD1Q9UGP4 676 aa6.8□□□□□ -1.32
CPSF7-219ENST00000539952 FRMPD4Q14CM0 1322 aa6.79□□□□□ -1.32
CPSF7-219ENST00000539952 SALL3Q9BXA9 1300 aa6.79□□□□□ -1.32
CPSF7-219ENST00000539952 SPTBN4Q9H254 2564 aa6.79□□□□□ -1.32
CPSF7-219ENST00000539952 NLRC5Q86WI3 1866 aa6.79□□□□□ -1.32
CPSF7-219ENST00000539952 ERICH2A1L162 156 aa6.79□□□□□ -1.32
CPSF7-219ENST00000539952 CARNS1A5YM72 827 aa6.79□□□□□ -1.32
CPSF7-219ENST00000539952 C2CD4DB7Z1M9 353 aa6.79□□□□□ -1.32
CPSF7-219ENST00000539952 C9IYK1 514 aa6.79□□□□□ -1.32
CPSF7-219ENST00000539952 HIP1O00291 1037 aa6.79□□□□□ -1.32
CPSF7-219ENST00000539952 PIK3CDO00329 1044 aa6.79□□□□□ -1.32
CPSF7-219ENST00000539952 ATP9AO75110 1047 aa6.79□□□□□ -1.32
CPSF7-219ENST00000539952 CDC45O75419 566 aa6.79□□□□□ -1.32
CPSF7-219ENST00000539952 LMNAP02545 664 aaKnown RBP6.79□□□□□ -1.32
CPSF7-219ENST00000539952 AOC1P19801 751 aa6.79□□□□□ -1.32
CPSF7-219ENST00000539952 MARK3P27448 753 aa6.79□□□□□ -1.32
CPSF7-219ENST00000539952 SMARCA1P28370 1054 aa6.79□□□□□ -1.32
CPSF7-219ENST00000539952 MCM5P33992 734 aa6.79□□□□□ -1.32
CPSF7-219ENST00000539952 PPM1AP35813 382 aa6.79□□□□□ -1.32
CPSF7-219ENST00000539952 SLC26A2P50443 739 aa6.79□□□□□ -1.32
CPSF7-219ENST00000539952 IGBP1P78318 339 aa6.79□□□□□ -1.32
CPSF7-219ENST00000539952 RBM10P98175 930 aaKnown RBP6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms