RNA–Protein interactions for RNA: ENST00000539584.5

UBE3B-209, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 2,006 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-209ENST00000539584 GKAP1Q5VSY0 366 aaPredicted RBP14.41□□□□□ -0.1
UBE3B-209ENST00000539584 TTBK2Q6IQ55 1244 aa14.41□□□□□ -0.1
UBE3B-209ENST00000539584 POTEGQ6S5H5 508 aa14.41□□□□□ -0.1
UBE3B-209ENST00000539584 POTEEQ6S8J3 1075 aa14.41□□□□□ -0.1
UBE3B-209ENST00000539584 STXBP4Q6ZWJ1 553 aa14.41□□□□□ -0.1
UBE3B-209ENST00000539584 TBC1D16Q8TBP0 767 aa14.41□□□□□ -0.1
UBE3B-209ENST00000539584 CTNNBL1Q8WYA6 563 aaPredicted RBP14.41□□□□□ -0.1
UBE3B-209ENST00000539584 BORCS6Q96GS4 357 aa14.41□□□□□ -0.1
UBE3B-209ENST00000539584 MYCBPQ99417 103 aaPredicted RBP14.41□□□□□ -0.1
UBE3B-209ENST00000539584 PSMD1Q99460 953 aa14.41□□□□□ -0.1
UBE3B-209ENST00000539584 FMO2Q99518 471 aa14.41□□□□□ -0.1
UBE3B-209ENST00000539584 AP1M1Q9BXS5 423 aa14.41□□□□□ -0.1
UBE3B-209ENST00000539584 FAM129AQ9BZQ8 928 aa14.41□□□□□ -0.1
UBE3B-209ENST00000539584 COA1Q9GZY4 146 aa14.41□□□□□ -0.1
UBE3B-209ENST00000539584 KANSL2Q9H9L4 492 aa14.41□□□□□ -0.1
UBE3B-209ENST00000539584 SEL1LQ9UBV2 794 aa14.41□□□□□ -0.1
UBE3B-209ENST00000539584 AMACRQ9UHK6 382 aa14.41□□□□□ -0.1
UBE3B-209ENST00000539584 F8VZ95 297 aa14.41□□□□□ -0.1
UBE3B-209ENST00000539584 DAPK3O43293 454 aa14.41□□□□□ -0.1
UBE3B-209ENST00000539584 SPATA31C1P0DKV0 1188 aa14.41□□□□□ -0.1
UBE3B-209ENST00000539584 GHRP10912 638 aa14.41□□□□□ -0.1
UBE3B-209ENST00000539584 HOXA10P31260 410 aaPredicted RBP14.41□□□□□ -0.1
UBE3B-209ENST00000539584 HOXD13P35453 343 aa14.41□□□□□ -0.1
UBE3B-209ENST00000539584 SREBF1P36956 1147 aa14.41□□□□□ -0.1
UBE3B-209ENST00000539584 MMP14P50281 582 aa14.41□□□□□ -0.1
UBE3B-209ENST00000539584 CASP5P51878 434 aa14.41□□□□□ -0.1
UBE3B-209ENST00000539584 GALCP54803 685 aa14.41□□□□□ -0.1
UBE3B-209ENST00000539584 PPATQ06203 517 aa14.41□□□□□ -0.1
UBE3B-209ENST00000539584 IFFO1Q0D2I5 559 aa14.41□□□□□ -0.1
UBE3B-209ENST00000539584 TCEAL1Q15170 157 aa14.41□□□□□ -0.1
UBE3B-209ENST00000539584 PPP2R5AQ15172 486 aa14.41□□□□□ -0.1
UBE3B-209ENST00000539584 QRICH1Q2TAL8 776 aa14.41□□□□□ -0.1
UBE3B-209ENST00000539584 TCERG1LQ5VWI1 586 aa14.41□□□□□ -0.1
UBE3B-209ENST00000539584 CCDC13Q8IYE1 715 aa14.41□□□□□ -0.1
UBE3B-209ENST00000539584 CACNA2D3Q8IZS8 1091 aa14.41□□□□□ -0.1
UBE3B-209ENST00000539584 MAGEC3Q8TD91 643 aa14.41□□□□□ -0.1
UBE3B-209ENST00000539584 TXLNGYQ9BZA5 131 aa14.41□□□□□ -0.1
UBE3B-209ENST00000539584 CENPHQ9H3R5 247 aa14.41□□□□□ -0.1
UBE3B-209ENST00000539584 NYAP2Q9P242 653 aa14.41□□□□□ -0.1
UBE3B-209ENST00000539584 PARP2Q9UGN5 583 aa14.41□□□□□ -0.1
UBE3B-209ENST00000539584 DDX20Q9UHI6 824 aaKnown RBP14.41□□□□□ -0.1
UBE3B-209ENST00000539584 RASAL2Q9UJF2 1139 aa14.41□□□□□ -0.1
UBE3B-209ENST00000539584 ASTN1O14525 1302 aa14.4□□□□□ -0.1
UBE3B-209ENST00000539584 USP17L15C9J2P7 530 aa14.4□□□□□ -0.1
UBE3B-209ENST00000539584 USP17L13C9JLJ4 530 aa14.4□□□□□ -0.1
UBE3B-209ENST00000539584 USP17L11C9JVI0 530 aa14.4□□□□□ -0.1
UBE3B-209ENST00000539584 USP17L18D6R9N7 530 aa14.4□□□□□ -0.1
UBE3B-209ENST00000539584 USP17L22D6RA61 530 aa14.4□□□□□ -0.1
UBE3B-209ENST00000539584 USP17L17D6RBQ6 530 aa14.4□□□□□ -0.1
UBE3B-209ENST00000539584 USP17L19D6RCP7 530 aa14.4□□□□□ -0.1
UBE3B-209ENST00000539584 USP17L20D6RJB6 530 aa14.4□□□□□ -0.1
UBE3B-209ENST00000539584 MEIS2O14770 477 aa14.4□□□□□ -0.1
UBE3B-209ENST00000539584 EIF6P56537 245 aaKnown RBP14.4□□□□□ -0.1
UBE3B-209ENST00000539584 CACNB1Q02641 598 aaPredicted RBP14.4□□□□□ -0.1
UBE3B-209ENST00000539584 DHX9Q08211 1270 aaKnown RBP14.4□□□□□ -0.1
UBE3B-209ENST00000539584 USP17L24Q0WX57 530 aa14.4□□□□□ -0.1
UBE3B-209ENST00000539584 TRAF1Q13077 416 aa14.4□□□□□ -0.1
UBE3B-209ENST00000539584 PICALMQ13492 652 aa14.4□□□□□ -0.1
UBE3B-209ENST00000539584 PRR5LQ6MZQ0 368 aa14.4□□□□□ -0.1
UBE3B-209ENST00000539584 USP17L6PQ6QN14 398 aa14.4□□□□□ -0.1
UBE3B-209ENST00000539584 RHOT2Q8IXI1 618 aa14.4□□□□□ -0.1
UBE3B-209ENST00000539584 TLCD1Q96CP7 247 aa14.4□□□□□ -0.1
UBE3B-209ENST00000539584 PGM2Q96G03 612 aa14.4□□□□□ -0.1
UBE3B-209ENST00000539584 RUNDC3BQ96NL0 473 aa14.4□□□□□ -0.1
UBE3B-209ENST00000539584 CRAMP1Q96RY5 1269 aa14.4□□□□□ -0.1
UBE3B-209ENST00000539584 AMNQ9BXJ7 453 aa14.4□□□□□ -0.1
UBE3B-209ENST00000539584 KLC4Q9NSK0 619 aa14.4□□□□□ -0.1
UBE3B-209ENST00000539584 GREB1LQ9C091 1923 aaPredicted RBP14.4□□□□□ -0.1
UBE3B-209ENST00000539584 PFASO15067 1338 aa14.4□□□□□ -0.1
UBE3B-209ENST00000539584 SPDYE3A6NKU9 549 aa14.39□□□□□ -0.11
UBE3B-209ENST00000539584 CCDC169A6NNP5 214 aa14.39□□□□□ -0.11
UBE3B-209ENST00000539584 MIF4GDA9UHW6 222 aaKnown RBP14.39□□□□□ -0.11
UBE3B-209ENST00000539584 EVI5O60447 810 aa14.39□□□□□ -0.11
UBE3B-209ENST00000539584 KCNQ4P56696 695 aa14.39□□□□□ -0.11
UBE3B-209ENST00000539584 PABPC4Q13310 644 aaKnown RBP eCLIP14.39□□□□□ -0.11
UBE3B-209ENST00000539584 MYBPC2Q14324 1141 aa14.39□□□□□ -0.11
UBE3B-209ENST00000539584 KRT71Q3SY84 523 aa14.39□□□□□ -0.11
UBE3B-209ENST00000539584 HHIPL2Q6UWX4 724 aa14.39□□□□□ -0.11
UBE3B-209ENST00000539584 MORC4Q8TE76 937 aa14.39□□□□□ -0.11
UBE3B-209ENST00000539584 U2AF1L4Q8WU68 220 aaKnown RBP14.39□□□□□ -0.11
UBE3B-209ENST00000539584 TATDN2Q93075 761 aa14.39□□□□□ -0.11
UBE3B-209ENST00000539584 ERP44Q9BS26 406 aa14.39□□□□□ -0.11
UBE3B-209ENST00000539584 NEUROG2Q9H2A3 272 aa14.39□□□□□ -0.11
UBE3B-209ENST00000539584 KDM4CQ9H3R0 1056 aa14.39□□□□□ -0.11
UBE3B-209ENST00000539584 KCND2Q9NZV8 630 aa14.39□□□□□ -0.11
UBE3B-209ENST00000539584 CNOT7Q9UIV1 285 aaKnown RBP14.39□□□□□ -0.11
UBE3B-209ENST00000539584 NOVA2Q9UNW9 492 aaKnown RBP14.39□□□□□ -0.11
UBE3B-209ENST00000539584 ANKRD62A6NC57 917 aa14.39□□□□□ -0.11
UBE3B-209ENST00000539584 PODXLO00592 558 aa14.39□□□□□ -0.11
UBE3B-209ENST00000539584 TTI1O43156 1089 aa14.39□□□□□ -0.11
UBE3B-209ENST00000539584 GCNT3O95395 438 aa14.39□□□□□ -0.11
UBE3B-209ENST00000539584 GGPS1O95749 300 aa14.39□□□□□ -0.11
UBE3B-209ENST00000539584 FGGP02679 453 aa14.39□□□□□ -0.11
UBE3B-209ENST00000539584 CYP3A4P08684 503 aa14.39□□□□□ -0.11
UBE3B-209ENST00000539584 SLC16A2P36021 539 aa14.39□□□□□ -0.11
UBE3B-209ENST00000539584 PLS1Q14651 629 aa14.39□□□□□ -0.11
UBE3B-209ENST00000539584 PRR16Q569H4 304 aa14.39□□□□□ -0.11
UBE3B-209ENST00000539584 DUPD1Q68J44 220 aa14.39□□□□□ -0.11
UBE3B-209ENST00000539584 KCTD1Q719H9 257 aa14.39□□□□□ -0.11
UBE3B-209ENST00000539584 DDX42Q86XP3 938 aaKnown RBP eCLIP14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms