RNA–Protein interactions for RNA: ENST00000539442.1

LEMD3-202, Transcript of LEM domain containing 3, humanhuman

TSL 2

Gene LEMD3, Length 932 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-202ENST00000539442 BPIFA3Q9BQP9 254 aa11.82□□□□□ -0.52
LEMD3-202ENST00000539442 REEP2Q9BRK0 252 aa11.82□□□□□ -0.52
LEMD3-202ENST00000539442 DNAJC25Q9H1X3 360 aa11.82□□□□□ -0.52
LEMD3-202ENST00000539442 CYP26B1Q9NR63 512 aa11.82□□□□□ -0.52
LEMD3-202ENST00000539442 PANK4Q9NVE7 773 aa11.82□□□□□ -0.52
LEMD3-202ENST00000539442 SEL1LQ9UBV2 794 aa11.82□□□□□ -0.52
LEMD3-202ENST00000539442 TRIM17Q9Y577 477 aa11.82□□□□□ -0.52
LEMD3-202ENST00000539442 COL4A3BPQ9Y5P4 624 aa11.82□□□□□ -0.52
LEMD3-202ENST00000539442 HBP1O60381 514 aa11.81□□□□□ -0.52
LEMD3-202ENST00000539442 USO1O60763 962 aaKnown RBP11.81□□□□□ -0.52
LEMD3-202ENST00000539442 FAM13AO94988 1023 aa11.81□□□□□ -0.52
LEMD3-202ENST00000539442 RARBP10826 455 aa11.81□□□□□ -0.52
LEMD3-202ENST00000539442 PTGS1P23219 599 aa11.81□□□□□ -0.52
LEMD3-202ENST00000539442 RFC5P40937 340 aa11.81□□□□□ -0.52
LEMD3-202ENST00000539442 ZNF165P49910 485 aa11.81□□□□□ -0.52
LEMD3-202ENST00000539442 ZNF131P52739 623 aa11.81□□□□□ -0.52
LEMD3-202ENST00000539442 NPEPPSP55786 919 aa11.81□□□□□ -0.52
LEMD3-202ENST00000539442 GJA9P57773 515 aa11.81□□□□□ -0.52
LEMD3-202ENST00000539442 COASYQ13057 564 aa11.81□□□□□ -0.52
LEMD3-202ENST00000539442 PLCB4Q15147 1175 aa11.81□□□□□ -0.52
LEMD3-202ENST00000539442 TARBP2Q15633 366 aaKnown RBP11.81□□□□□ -0.52
LEMD3-202ENST00000539442 ISM2Q6H9L7 571 aa11.81□□□□□ -0.52
LEMD3-202ENST00000539442 C11orf57Q6ZUT1 292 aaPredicted RBP11.81□□□□□ -0.52
LEMD3-202ENST00000539442 TRIM50Q86XT4 487 aa11.81□□□□□ -0.52
LEMD3-202ENST00000539442 EXOC8Q8IYI6 725 aa11.81□□□□□ -0.52
LEMD3-202ENST00000539442 MCPH1Q8NEM0 835 aa11.81□□□□□ -0.52
LEMD3-202ENST00000539442 DRC1Q96MC2 740 aa11.81□□□□□ -0.52
LEMD3-202ENST00000539442 C16orf70Q9BSU1 422 aa11.81□□□□□ -0.52
LEMD3-202ENST00000539442 UPF3AQ9H1J1 476 aaKnown RBP11.81□□□□□ -0.52
LEMD3-202ENST00000539442 ATP6V0A4Q9HBG4 840 aa11.81□□□□□ -0.52
LEMD3-202ENST00000539442 SPC25Q9HBM1 224 aa11.81□□□□□ -0.52
LEMD3-202ENST00000539442 OLFML3Q9NRN5 406 aa11.81□□□□□ -0.52
LEMD3-202ENST00000539442 TSKSQ9UJT2 592 aa11.81□□□□□ -0.52
LEMD3-202ENST00000539442 NPHP3-ACAD11A0A0J9YXS1 232 aa11.8□□□□□ -0.52
LEMD3-202ENST00000539442 FSD2A1L4K1 749 aa11.8□□□□□ -0.52
LEMD3-202ENST00000539442 TMEM150BA6NC51 233 aa11.8□□□□□ -0.52
LEMD3-202ENST00000539442 GOLGA6L3A6NEY3 463 aa11.8□□□□□ -0.52
LEMD3-202ENST00000539442 H3BRB1 525 aa11.8□□□□□ -0.52
LEMD3-202ENST00000539442 GAS2O43903 313 aaKnown RBP11.8□□□□□ -0.52
LEMD3-202ENST00000539442 MSCO60682 206 aa11.8□□□□□ -0.52
LEMD3-202ENST00000539442 KPNA6O60684 536 aa11.8□□□□□ -0.52
LEMD3-202ENST00000539442 F2P00734 622 aa11.8□□□□□ -0.52
LEMD3-202ENST00000539442 ERCC5P28715 1186 aaPredicted RBP11.8□□□□□ -0.52
LEMD3-202ENST00000539442 CNGA1P29973 690 aa11.8□□□□□ -0.52
LEMD3-202ENST00000539442 GRK4P32298 578 aa11.8□□□□□ -0.52
LEMD3-202ENST00000539442 TRIM32Q13049 653 aa11.8□□□□□ -0.52
LEMD3-202ENST00000539442 STIM1Q13586 685 aa11.8□□□□□ -0.52
LEMD3-202ENST00000539442 MTERF2Q49AM1 385 aa11.8□□□□□ -0.52
LEMD3-202ENST00000539442 HERC4Q5GLZ8 1057 aaPredicted RBP11.8□□□□□ -0.52
LEMD3-202ENST00000539442 FAM26FQ5R3K3 315 aa11.8□□□□□ -0.52
LEMD3-202ENST00000539442 SLC7A3Q8WY07 619 aa11.8□□□□□ -0.52
LEMD3-202ENST00000539442 KIFAP3Q92845 792 aa11.8□□□□□ -0.52
LEMD3-202ENST00000539442 CEP89Q96ST8 783 aa11.8□□□□□ -0.52
LEMD3-202ENST00000539442 JPH2Q9BR39 696 aaPredicted RBP11.8□□□□□ -0.52
LEMD3-202ENST00000539442 TUT1Q9H6E5 874 aaKnown RBP11.8□□□□□ -0.52
LEMD3-202ENST00000539442 DHX33Q9H6R0 707 aaKnown RBP11.8□□□□□ -0.52
LEMD3-202ENST00000539442 C17orf75Q9HAS0 396 aa11.8□□□□□ -0.52
LEMD3-202ENST00000539442 PARVGQ9HBI0 331 aa11.8□□□□□ -0.52
LEMD3-202ENST00000539442 PDLIM7Q9NR12 457 aa11.8□□□□□ -0.52
LEMD3-202ENST00000539442 LARSQ9P2J5 1176 aaKnown RBP11.8□□□□□ -0.52
LEMD3-202ENST00000539442 PTCH2Q9Y6C5 1203 aa11.8□□□□□ -0.52
LEMD3-202ENST00000539442 COL1A2P08123 1366 aa11.79□□□□□ -0.52
LEMD3-202ENST00000539442 ZEB2O60315 1214 aa11.79□□□□□ -0.52
LEMD3-202ENST00000539442 HIP1RO75146 1068 aa11.79□□□□□ -0.52
LEMD3-202ENST00000539442 KIF20AO95235 890 aa11.79□□□□□ -0.52
LEMD3-202ENST00000539442 INHAP05111 366 aa11.79□□□□□ -0.52
LEMD3-202ENST00000539442 MAPTP10636 758 aaKnown RBP11.79□□□□□ -0.52
LEMD3-202ENST00000539442 MARK3P27448 753 aa11.79□□□□□ -0.52
LEMD3-202ENST00000539442 CCND3P30281 292 aaPredicted RBP11.79□□□□□ -0.52
LEMD3-202ENST00000539442 POLGP54098 1239 aaPredicted RBP11.79□□□□□ -0.52
LEMD3-202ENST00000539442 RTP1P59025 263 aa11.79□□□□□ -0.52
LEMD3-202ENST00000539442 RAD51AP2Q09MP3 1159 aa11.79□□□□□ -0.52
LEMD3-202ENST00000539442 MAPK7Q13164 816 aa11.79□□□□□ -0.52
LEMD3-202ENST00000539442 FSCN1Q16658 493 aaKnown RBP11.79□□□□□ -0.52
LEMD3-202ENST00000539442 ZNF484Q5JVG2 852 aa11.79□□□□□ -0.52
LEMD3-202ENST00000539442 TRMT1LQ7Z2T5 733 aaKnown RBP11.79□□□□□ -0.52
LEMD3-202ENST00000539442 KIAA0895Q8NCT3 520 aa11.79□□□□□ -0.52
LEMD3-202ENST00000539442 LENG1Q96BZ8 264 aaPredicted RBP11.79□□□□□ -0.52
LEMD3-202ENST00000539442 KATNAL1Q9BW62 490 aa11.79□□□□□ -0.52
LEMD3-202ENST00000539442 RBSNQ9H1K0 784 aa11.79□□□□□ -0.52
LEMD3-202ENST00000539442 ZHX3Q9H4I2 956 aa11.79□□□□□ -0.52
LEMD3-202ENST00000539442 DDX20Q9UHI6 824 aaKnown RBP11.79□□□□□ -0.52
LEMD3-202ENST00000539442 KCNG1Q9UIX4 513 aa11.79□□□□□ -0.52
LEMD3-202ENST00000539442 PTPN22Q9Y2R2 807 aa11.79□□□□□ -0.52
LEMD3-202ENST00000539442 GDAQ9Y2T3 454 aa11.79□□□□□ -0.52
LEMD3-202ENST00000539442 PCDHA2Q9Y5H9 948 aa11.79□□□□□ -0.52
LEMD3-202ENST00000539442 SYNRGQ9UMZ2 1314 aa11.79□□□□□ -0.52
LEMD3-202ENST00000539442 WDR81Q562E7 1941 aa11.78□□□□□ -0.52
LEMD3-202ENST00000539442 SMTNL1A8MU46 457 aa11.78□□□□□ -0.52
LEMD3-202ENST00000539442 RSPH10B2B2RC85 870 aa11.78□□□□□ -0.52
LEMD3-202ENST00000539442 PPP1R3GB7ZBB8 358 aa11.78□□□□□ -0.52
LEMD3-202ENST00000539442 PSMA7O14818 248 aa11.78□□□□□ -0.52
LEMD3-202ENST00000539442 IKBKBO14920 756 aa11.78□□□□□ -0.52
LEMD3-202ENST00000539442 ADAMTS4O75173 837 aa11.78□□□□□ -0.52
LEMD3-202ENST00000539442 MAFO75444 373 aaPredicted RBP11.78□□□□□ -0.52
LEMD3-202ENST00000539442 C6orf222P0C671 652 aaPredicted RBP11.78□□□□□ -0.52
LEMD3-202ENST00000539442 RSPH10BP0C881 870 aa11.78□□□□□ -0.52
LEMD3-202ENST00000539442 ZNF286BP0CG31 522 aa11.78□□□□□ -0.52
LEMD3-202ENST00000539442 PLS3P13797 630 aa11.78□□□□□ -0.52
LEMD3-202ENST00000539442 CST5P28325 142 aaPredicted RBP11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms