RNA–Protein interactions for RNA: ENST00000539194.5

PROM1-219, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-219ENST00000539194 ZNF720Q7Z2F6 126 aa7.58□□□□□ -1.2
PROM1-219ENST00000539194 EFCAB13Q8IY85 973 aa7.58□□□□□ -1.2
PROM1-219ENST00000539194 TLCD1Q96CP7 247 aa7.58□□□□□ -1.2
PROM1-219ENST00000539194 SERPINA10Q9UK55 444 aa7.58□□□□□ -1.2
PROM1-219ENST00000539194 WDR90Q96KV7 1748 aa7.58□□□□□ -1.2
PROM1-219ENST00000539194 MYO1FO00160 1098 aa7.58□□□□□ -1.2
PROM1-219ENST00000539194 PPFIA2O75334 1257 aa7.58□□□□□ -1.2
PROM1-219ENST00000539194 TAL1P17542 331 aaPredicted RBP7.58□□□□□ -1.2
PROM1-219ENST00000539194 ASIC2Q16515 512 aa7.58□□□□□ -1.2
PROM1-219ENST00000539194 STRIP1Q5VSL9 837 aa7.58□□□□□ -1.2
PROM1-219ENST00000539194 GJB7Q6PEY0 223 aa7.58□□□□□ -1.2
PROM1-219ENST00000539194 TMEM179Q6ZVK1 233 aa7.58□□□□□ -1.2
PROM1-219ENST00000539194 SH2D3CQ8N5H7 860 aa7.58□□□□□ -1.2
PROM1-219ENST00000539194 ATP6V1G3Q96LB4 118 aa7.58□□□□□ -1.2
PROM1-219ENST00000539194 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.58□□□□□ -1.2
PROM1-219ENST00000539194 RANBP17Q9H2T7 1088 aaKnown RBP7.58□□□□□ -1.2
PROM1-219ENST00000539194 ADAM7Q9H2U9 754 aa7.58□□□□□ -1.2
PROM1-219ENST00000539194 GOLPH3Q9H4A6 298 aa7.58□□□□□ -1.2
PROM1-219ENST00000539194 PI4KBQ9UBF8 816 aa7.58□□□□□ -1.2
PROM1-219ENST00000539194 MGAMO43451 1857 aa7.58□□□□□ -1.2
PROM1-219ENST00000539194 CETN3O15182 167 aa7.58□□□□□ -1.2
PROM1-219ENST00000539194 TRIM37O94972 964 aa7.58□□□□□ -1.2
PROM1-219ENST00000539194 FOSP01100 380 aaPredicted RBP7.58□□□□□ -1.2
PROM1-219ENST00000539194 VIL1P09327 827 aaKnown RBP7.58□□□□□ -1.2
PROM1-219ENST00000539194 NPR1P16066 1061 aa7.58□□□□□ -1.2
PROM1-219ENST00000539194 VCAM1P19320 739 aa7.58□□□□□ -1.2
PROM1-219ENST00000539194 LSP1P33241 339 aa7.58□□□□□ -1.2
PROM1-219ENST00000539194 TNNT3P45378 269 aaPredicted RBP7.58□□□□□ -1.2
PROM1-219ENST00000539194 GUCY2DQ02846 1103 aa7.58□□□□□ -1.2
PROM1-219ENST00000539194 CUL1Q13616 776 aa7.58□□□□□ -1.2
PROM1-219ENST00000539194 MYBPC2Q14324 1141 aa7.58□□□□□ -1.2
PROM1-219ENST00000539194 SIX1Q15475 284 aaPredicted RBP7.58□□□□□ -1.2
PROM1-219ENST00000539194 ALKBH5Q6P6C2 394 aaKnown RBP7.58□□□□□ -1.2
PROM1-219ENST00000539194 CACNA2D4Q7Z3S7 1137 aa7.58□□□□□ -1.2
PROM1-219ENST00000539194 PODNQ7Z5L7 613 aa7.58□□□□□ -1.2
PROM1-219ENST00000539194 TMC3Q7Z5M5 1100 aa7.58□□□□□ -1.2
PROM1-219ENST00000539194 GPIHBP1Q8IV16 184 aa7.58□□□□□ -1.2
PROM1-219ENST00000539194 SUGP1Q8IWZ8 645 aaKnown RBP7.58□□□□□ -1.2
PROM1-219ENST00000539194 C12orf56Q8IXR9 622 aa7.58□□□□□ -1.2
PROM1-219ENST00000539194 CAGE1Q8TC20 777 aa7.58□□□□□ -1.2
PROM1-219ENST00000539194 TEKT1Q969V4 418 aa7.58□□□□□ -1.2
PROM1-219ENST00000539194 KRT12Q99456 494 aa7.58□□□□□ -1.2
PROM1-219ENST00000539194 EPN3Q9H201 632 aa7.58□□□□□ -1.2
PROM1-219ENST00000539194 KCND2Q9NZV8 630 aa7.58□□□□□ -1.2
PROM1-219ENST00000539194 DHX15O43143 795 aaKnown RBP7.57□□□□□ -1.2
PROM1-219ENST00000539194 OPA1O60313 960 aa7.57□□□□□ -1.2
PROM1-219ENST00000539194 ITGA4P13612 1032 aa7.57□□□□□ -1.2
PROM1-219ENST00000539194 PTGIRP43119 386 aa7.57□□□□□ -1.2
PROM1-219ENST00000539194 SCNN1DP51172 638 aa7.57□□□□□ -1.2
PROM1-219ENST00000539194 PAK2Q13177 524 aa7.57□□□□□ -1.2
PROM1-219ENST00000539194 EXOC3L4Q17RC7 722 aa7.57□□□□□ -1.2
PROM1-219ENST00000539194 SLFN13Q68D06 897 aa7.57□□□□□ -1.2
PROM1-219ENST00000539194 DUPD1Q68J44 220 aa7.57□□□□□ -1.2
PROM1-219ENST00000539194 ZDHHC24Q6UX98 284 aa7.57□□□□□ -1.2
PROM1-219ENST00000539194 PALB2Q86YC2 1186 aa7.57□□□□□ -1.2
PROM1-219ENST00000539194 PCMTD1Q96MG8 357 aaPredicted RBP7.57□□□□□ -1.2
PROM1-219ENST00000539194 AMNQ9BXJ7 453 aa7.57□□□□□ -1.2
PROM1-219ENST00000539194 STK33Q9BYT3 514 aa7.57□□□□□ -1.2
PROM1-219ENST00000539194 DEF6Q9H4E7 631 aa7.57□□□□□ -1.2
PROM1-219ENST00000539194 METTL14Q9HCE5 456 aaKnown RBP7.57□□□□□ -1.2
PROM1-219ENST00000539194 ARMCX3Q9UH62 379 aaPredicted RBP7.57□□□□□ -1.2
PROM1-219ENST00000539194 ZBTB39O15060 712 aa7.57□□□□□ -1.2
PROM1-219ENST00000539194 SART1O43290 800 aaKnown RBP7.57□□□□□ -1.2
PROM1-219ENST00000539194 FSBPO95073 299 aa7.57□□□□□ -1.2
PROM1-219ENST00000539194 TMEM253P0C7T8 217 aa7.57□□□□□ -1.2
PROM1-219ENST00000539194 GUCY2CP25092 1073 aa7.57□□□□□ -1.2
PROM1-219ENST00000539194 PEX5P50542 639 aa7.57□□□□□ -1.2
PROM1-219ENST00000539194 DRG2P55039 364 aaKnown RBP7.57□□□□□ -1.2
PROM1-219ENST00000539194 PTENP60484 403 aa7.57□□□□□ -1.2
PROM1-219ENST00000539194 COG2Q14746 738 aa7.57□□□□□ -1.2
PROM1-219ENST00000539194 PTGISQ16647 500 aa7.57□□□□□ -1.2
PROM1-219ENST00000539194 CCDC40Q4G0X9 1142 aa7.57□□□□□ -1.2
PROM1-219ENST00000539194 DNAJC21Q5F1R6 531 aaKnown RBP7.57□□□□□ -1.2
PROM1-219ENST00000539194 PHLDB3Q6NSJ2 640 aa7.57□□□□□ -1.2
PROM1-219ENST00000539194 PRPF38AQ8NAV1 312 aaKnown RBP7.57□□□□□ -1.2
PROM1-219ENST00000539194 C3orf20Q8ND61 904 aa7.57□□□□□ -1.2
PROM1-219ENST00000539194 CCDC43Q96MW1 224 aaKnown RBP7.57□□□□□ -1.2
PROM1-219ENST00000539194 SLITRK6Q9H5Y7 841 aa7.57□□□□□ -1.2
PROM1-219ENST00000539194 EFCC1Q9HA90 598 aa7.57□□□□□ -1.2
PROM1-219ENST00000539194 CNOT8Q9UFF9 292 aaKnown RBP7.57□□□□□ -1.2
PROM1-219ENST00000539194 PPP1R9AQ9ULJ8 1098 aa7.57□□□□□ -1.2
PROM1-219ENST00000539194 NOC2LQ9Y3T9 749 aaKnown RBP7.57□□□□□ -1.2
PROM1-219ENST00000539194 MEIS1O00470 390 aa7.57□□□□□ -1.2
PROM1-219ENST00000539194 EVI5O60447 810 aa7.57□□□□□ -1.2
PROM1-219ENST00000539194 SOX5P35711 763 aa7.57□□□□□ -1.2
PROM1-219ENST00000539194 PAFAH1B1P43034 410 aa7.57□□□□□ -1.2
PROM1-219ENST00000539194 NAP1L1P55209 391 aaKnown RBP7.57□□□□□ -1.2
PROM1-219ENST00000539194 PABPC4Q13310 644 aaKnown RBP eCLIP7.57□□□□□ -1.2
PROM1-219ENST00000539194 RAPGEF1Q13905 1077 aa7.57□□□□□ -1.2
PROM1-219ENST00000539194 CYP1B1Q16678 543 aa7.57□□□□□ -1.2
PROM1-219ENST00000539194 EPC2Q52LR7 807 aa7.57□□□□□ -1.2
PROM1-219ENST00000539194 CNPY4Q8N129 248 aa7.57□□□□□ -1.2
PROM1-219ENST00000539194 PLEKHO2Q8TD55 490 aa7.57□□□□□ -1.2
PROM1-219ENST00000539194 ST6GALNAC4Q9H4F1 302 aa7.57□□□□□ -1.2
PROM1-219ENST00000539194 ERVK-5Q9HDB9 667 aa7.57□□□□□ -1.2
PROM1-219ENST00000539194 DOCK1Q14185 1865 aa7.57□□□□□ -1.2
PROM1-219ENST00000539194 FAM196BA6NMK8 535 aa7.56□□□□□ -1.2
PROM1-219ENST00000539194 HMGB1P1B2RPK0 211 aaPredicted RBP7.56□□□□□ -1.2
PROM1-219ENST00000539194 CCDC188H7C350 402 aa7.56□□□□□ -1.2
PROM1-219ENST00000539194 CALUO43852 315 aaPredicted RBP7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms