RNA–Protein interactions for RNA: ENST00000538838.5

TMEM260-202, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best) BASIC

Gene TMEM260, Length 1,638 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-202ENST00000538838 KANK3Q6NY19 840 aa26.12■■□□□ 1.77
TMEM260-202ENST00000538838 DYMQ7RTS9 669 aa26.12■■□□□ 1.77
TMEM260-202ENST00000538838 DDX12PQ92771 950 aa26.12■■□□□ 1.77
TMEM260-202ENST00000538838 TRIM9Q9C026 710 aa26.12■■□□□ 1.77
TMEM260-202ENST00000538838 NUP62CLQ9H1M0 184 aa26.12■■□□□ 1.77
TMEM260-202ENST00000538838 DHX33Q9H6R0 707 aaKnown RBP26.12■■□□□ 1.77
TMEM260-202ENST00000538838 ATP6V0A4Q9HBG4 840 aa26.12■■□□□ 1.77
TMEM260-202ENST00000538838 XPNPEP1Q9NQW7 623 aa26.12■■□□□ 1.77
TMEM260-202ENST00000538838 GTF2IRD1Q9UHL9 959 aa26.12■■□□□ 1.77
TMEM260-202ENST00000538838 A0A0U1RQG5 324 aaPredicted RBP26.11■■□□□ 1.77
TMEM260-202ENST00000538838 RRN3P2A6NIE6 340 aa26.11■■□□□ 1.77
TMEM260-202ENST00000538838 TRAK2O60296 914 aa26.11■■□□□ 1.77
TMEM260-202ENST00000538838 ZNF200P98182 395 aaPredicted RBP26.11■■□□□ 1.77
TMEM260-202ENST00000538838 AMPD3Q01432 767 aa26.11■■□□□ 1.77
TMEM260-202ENST00000538838 PNOCQ13519 176 aa26.11■■□□□ 1.77
TMEM260-202ENST00000538838 CUL4BQ13620 913 aa26.11■■□□□ 1.77
TMEM260-202ENST00000538838 GDF6Q6KF10 455 aaPredicted RBP26.11■■□□□ 1.77
TMEM260-202ENST00000538838 NFRKBQ6P4R8 1299 aa26.11■■□□□ 1.77
TMEM260-202ENST00000538838 MAEAQ7L5Y9 396 aa26.11■■□□□ 1.77
TMEM260-202ENST00000538838 SLC7A3Q8WY07 619 aa26.11■■□□□ 1.77
TMEM260-202ENST00000538838 ERCC4Q92889 916 aaPredicted RBP26.11■■□□□ 1.77
TMEM260-202ENST00000538838 SENP6Q9GZR1 1112 aaPredicted RBP26.11■■□□□ 1.77
TMEM260-202ENST00000538838 TUBE1Q9UJT0 475 aa26.11■■□□□ 1.77
TMEM260-202ENST00000538838 MAFO75444 373 aaPredicted RBP26.1■■□□□ 1.77
TMEM260-202ENST00000538838 KRT18P05783 430 aaKnown RBP26.1■■□□□ 1.77
TMEM260-202ENST00000538838 KLRC1P26715 233 aa26.1■■□□□ 1.77
TMEM260-202ENST00000538838 SOX10P56693 466 aa26.1■■□□□ 1.77
TMEM260-202ENST00000538838 ADAM17P78536 824 aa26.1■■□□□ 1.77
TMEM260-202ENST00000538838 MDM2Q00987 491 aaPredicted RBP26.1■■□□□ 1.77
TMEM260-202ENST00000538838 CAVIN1Q6NZI2 390 aaKnown RBP26.1■■□□□ 1.77
TMEM260-202ENST00000538838 MTHFD1LQ6UB35 978 aa26.1■■□□□ 1.77
TMEM260-202ENST00000538838 SESTD1Q86VW0 696 aa26.1■■□□□ 1.77
TMEM260-202ENST00000538838 CCDC34Q96HJ3 373 aa26.1■■□□□ 1.77
TMEM260-202ENST00000538838 REEP2Q9BRK0 252 aa26.1■■□□□ 1.77
TMEM260-202ENST00000538838 POLD4Q9HCU8 107 aa26.1■■□□□ 1.77
TMEM260-202ENST00000538838 PDLIM7Q9NR12 457 aa26.1■■□□□ 1.77
TMEM260-202ENST00000538838 KCND2Q9NZV8 630 aa26.1■■□□□ 1.77
TMEM260-202ENST00000538838 GTPBP6O43824 516 aaPredicted RBP26.1■■□□□ 1.77
TMEM260-202ENST00000538838 GUCY2CP25092 1073 aa26.1■■□□□ 1.77
TMEM260-202ENST00000538838 LRRC71Q8N4P6 559 aa26.1■■□□□ 1.77
TMEM260-202ENST00000538838 C7orf25Q9BPX7 421 aa26.1■■□□□ 1.77
TMEM260-202ENST00000538838 LRRC27Q9C0I9 530 aa26.1■■□□□ 1.77
TMEM260-202ENST00000538838 TMEM63CQ9P1W3 806 aa26.1■■□□□ 1.77
TMEM260-202ENST00000538838 TREHO43280 583 aa26.09■■□□□ 1.77
TMEM260-202ENST00000538838 COL6A1P12109 1028 aa26.09■■□□□ 1.77
TMEM260-202ENST00000538838 ASIC1P78348 528 aa26.09■■□□□ 1.77
TMEM260-202ENST00000538838 GIT2Q14161 759 aa26.09■■□□□ 1.77
TMEM260-202ENST00000538838 SKOR2Q2VWA4 1001 aaPredicted RBP26.09■■□□□ 1.77
TMEM260-202ENST00000538838 SLC43A3Q8NBI5 491 aa26.09■■□□□ 1.77
TMEM260-202ENST00000538838 DNAJC19Q96DA6 116 aa26.09■■□□□ 1.77
TMEM260-202ENST00000538838 GPRC5CQ9NQ84 441 aa26.09■■□□□ 1.77
TMEM260-202ENST00000538838 HOOK1Q9UJC3 728 aaKnown RBP26.09■■□□□ 1.77
TMEM260-202ENST00000538838 IGKV6-21A0A0C4DH24 114 aa26.08■■□□□ 1.77
TMEM260-202ENST00000538838 MBLAC1A4D2B0 266 aaPredicted RBP26.08■■□□□ 1.77
TMEM260-202ENST00000538838 RSPH10B2B2RC85 870 aa26.08■■□□□ 1.77
TMEM260-202ENST00000538838 RSPH10BP0C881 870 aa26.08■■□□□ 1.77
TMEM260-202ENST00000538838 GNAT1P11488 350 aa26.08■■□□□ 1.77
TMEM260-202ENST00000538838 EN2P19622 333 aaPredicted RBP26.08■■□□□ 1.77
TMEM260-202ENST00000538838 CLCN3P51790 818 aa26.08■■□□□ 1.77
TMEM260-202ENST00000538838 DRP2Q13474 957 aa26.08■■□□□ 1.77
TMEM260-202ENST00000538838 ELOA2Q8IYF1 753 aaPredicted RBP26.08■■□□□ 1.77
TMEM260-202ENST00000538838 MCPH1Q8NEM0 835 aa26.08■■□□□ 1.77
TMEM260-202ENST00000538838 TMEM143Q96AN5 459 aa26.08■■□□□ 1.77
TMEM260-202ENST00000538838 PAWRQ96IZ0 340 aaKnown RBP26.08■■□□□ 1.77
TMEM260-202ENST00000538838 SUGCTQ9HAC7 445 aa26.08■■□□□ 1.77
TMEM260-202ENST00000538838 ARVCFO00192 962 aa26.07■■□□□ 1.76
TMEM260-202ENST00000538838 MAGEB2O15479 319 aa26.07■■□□□ 1.76
TMEM260-202ENST00000538838 HIP1RO75146 1068 aa26.07■■□□□ 1.76
TMEM260-202ENST00000538838 DPYDQ12882 1025 aa26.07■■□□□ 1.76
TMEM260-202ENST00000538838 MAPK7Q13164 816 aa26.07■■□□□ 1.76
TMEM260-202ENST00000538838 FAM102BQ5T8I3 360 aa26.07■■□□□ 1.76
TMEM260-202ENST00000538838 EFCAB12Q6NXP0 572 aa26.07■■□□□ 1.76
TMEM260-202ENST00000538838 DAW1Q8N136 415 aa26.07■■□□□ 1.76
TMEM260-202ENST00000538838 METTL13Q8N6R0 699 aa26.07■■□□□ 1.76
TMEM260-202ENST00000538838 ABHD8Q96I13 439 aa26.07■■□□□ 1.76
TMEM260-202ENST00000538838 MYL1P05976 194 aa26.06■■□□□ 1.76
TMEM260-202ENST00000538838 CAPN2P17655 700 aa26.06■■□□□ 1.76
TMEM260-202ENST00000538838 ATN1P54259 1190 aaPredicted RBP26.06■■□□□ 1.76
TMEM260-202ENST00000538838 PTPN11Q06124 597 aaPredicted RBP26.06■■□□□ 1.76
TMEM260-202ENST00000538838 MKRN4PQ13434 485 aaPredicted RBP26.06■■□□□ 1.76
TMEM260-202ENST00000538838 CCDC183Q5T5S1 534 aa26.06■■□□□ 1.76
TMEM260-202ENST00000538838 CNNM4Q6P4Q7 775 aa26.06■■□□□ 1.76
TMEM260-202ENST00000538838 RUFY4Q6ZNE9 571 aa26.06■■□□□ 1.76
TMEM260-202ENST00000538838 RETREG2Q8NC44 543 aa26.06■■□□□ 1.76
TMEM260-202ENST00000538838 JPH2Q9BR39 696 aaPredicted RBP26.06■■□□□ 1.76
TMEM260-202ENST00000538838 C11orf49Q9H6J7 331 aa26.06■■□□□ 1.76
TMEM260-202ENST00000538838 TRMT13Q9NUP7 481 aaKnown RBP26.06■■□□□ 1.76
TMEM260-202ENST00000538838 CYP2C9P11712 490 aa26.06■■□□□ 1.76
TMEM260-202ENST00000538838 IDEP14735 1019 aa26.06■■□□□ 1.76
TMEM260-202ENST00000538838 EXOC8Q8IYI6 725 aa26.06■■□□□ 1.76
TMEM260-202ENST00000538838 LINC01465Q8N7H1 131 aa26.06■■□□□ 1.76
TMEM260-202ENST00000538838 CTAGE1Q96RT6 745 aa26.06■■□□□ 1.76
TMEM260-202ENST00000538838 TIPINQ9BVW5 301 aa26.06■■□□□ 1.76
TMEM260-202ENST00000538838 POLR3FQ9H1D9 316 aaPredicted RBP26.06■■□□□ 1.76
TMEM260-202ENST00000538838 ODF2LQ9ULJ1 636 aa26.06■■□□□ 1.76
TMEM260-202ENST00000538838 TBCAO75347 108 aaKnown RBP26.05■■□□□ 1.76
TMEM260-202ENST00000538838 PTGISQ16647 500 aa26.05■■□□□ 1.76
TMEM260-202ENST00000538838 ZHX3Q9H4I2 956 aa26.05■■□□□ 1.76
TMEM260-202ENST00000538838 PCDHA2Q9Y5H9 948 aa26.05■■□□□ 1.76
TMEM260-202ENST00000538838 SFI1A8K8P3 1242 aa26.04■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms