RNA–Protein interactions for RNA: ENST00000538827.5

CD4-208, Transcript of CD4 molecule, humanhuman

TSL 1 (best)

Gene CD4, Length 985 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-208ENST00000538827 XPNPEP3Q9NQH7 507 aa15.69■□□□□ 0.1
CD4-208ENST00000538827 CYP26B1Q9NR63 512 aa15.69■□□□□ 0.1
CD4-208ENST00000538827 ERAP1Q9NZ08 941 aa15.69■□□□□ 0.1
CD4-208ENST00000538827 Q9Y3F1 56 aa15.69■□□□□ 0.1
CD4-208ENST00000538827 UNC80Q8N2C7 3258 aa15.69■□□□□ 0.1
CD4-208ENST00000538827 MYADML2A6NDP7 307 aa15.68■□□□□ 0.1
CD4-208ENST00000538827 RSPH10B2B2RC85 870 aa15.68■□□□□ 0.1
CD4-208ENST00000538827 EVI5O60447 810 aa15.68■□□□□ 0.1
CD4-208ENST00000538827 HIP1RO75146 1068 aa15.68■□□□□ 0.1
CD4-208ENST00000538827 PGK1P00558 417 aa15.68■□□□□ 0.1
CD4-208ENST00000538827 RSPH10BP0C881 870 aa15.68■□□□□ 0.1
CD4-208ENST00000538827 XRCC6P12956 609 aaKnown RBP eCLIP15.68■□□□□ 0.1
CD4-208ENST00000538827 BMP8BP34820 402 aa15.68■□□□□ 0.1
CD4-208ENST00000538827 SARSP49591 514 aaKnown RBP15.68■□□□□ 0.1
CD4-208ENST00000538827 SLC26A2P50443 739 aa15.68■□□□□ 0.1
CD4-208ENST00000538827 POLGP54098 1239 aaPredicted RBP15.68■□□□□ 0.1
CD4-208ENST00000538827 GIT2Q14161 759 aa15.68■□□□□ 0.1
CD4-208ENST00000538827 KCNB1Q14721 858 aa15.68■□□□□ 0.1
CD4-208ENST00000538827 MAP3K21Q5TCX8 1036 aa15.68■□□□□ 0.1
CD4-208ENST00000538827 NT5DC1Q5TFE4 455 aa15.68■□□□□ 0.1
CD4-208ENST00000538827 C1orf186Q6ZWK4 172 aa15.68■□□□□ 0.1
CD4-208ENST00000538827 SMYD4Q8IYR2 804 aaPredicted RBP15.68■□□□□ 0.1
CD4-208ENST00000538827 SPATA20Q8TB22 786 aa15.68■□□□□ 0.1
CD4-208ENST00000538827 ATP8B4Q8TF62 1192 aa15.68■□□□□ 0.1
CD4-208ENST00000538827 BBXQ8WY36 941 aaPredicted RBP15.68■□□□□ 0.1
CD4-208ENST00000538827 DNAJC19Q96DA6 116 aa15.68■□□□□ 0.1
CD4-208ENST00000538827 ATP6V0A4Q9HBG4 840 aa15.68■□□□□ 0.1
CD4-208ENST00000538827 POLD4Q9HCU8 107 aa15.68■□□□□ 0.1
CD4-208ENST00000538827 TBC1D7Q9P0N9 293 aa15.68■□□□□ 0.1
CD4-208ENST00000538827 DDX20Q9UHI6 824 aaKnown RBP15.68■□□□□ 0.1
CD4-208ENST00000538827 DACH1Q9UI36 760 aa15.68■□□□□ 0.1
CD4-208ENST00000538827 GDAQ9Y2T3 454 aa15.68■□□□□ 0.1
CD4-208ENST00000538827 KAT6AQ92794 2004 aa15.68■□□□□ 0.1
CD4-208ENST00000538827 PVALEFA0A1B0GWK0 134 aa15.67■□□□□ 0.1
CD4-208ENST00000538827 PPFIA4O75335 1185 aa15.67■□□□□ 0.1
CD4-208ENST00000538827 GUCY2CP25092 1073 aa15.67■□□□□ 0.1
CD4-208ENST00000538827 IGBP1P78318 339 aa15.67■□□□□ 0.1
CD4-208ENST00000538827 EMC2Q15006 297 aa15.67■□□□□ 0.1
CD4-208ENST00000538827 L1TD1Q5T7N2 865 aaKnown RBP15.67■□□□□ 0.1
CD4-208ENST00000538827 FAM102BQ5T8I3 360 aa15.67■□□□□ 0.1
CD4-208ENST00000538827 CNNM4Q6P4Q7 775 aa15.67■□□□□ 0.1
CD4-208ENST00000538827 SFR1Q86XK3 245 aa15.67■□□□□ 0.1
CD4-208ENST00000538827 HPS3Q969F9 1004 aa15.67■□□□□ 0.1
CD4-208ENST00000538827 UPF3AQ9H1J1 476 aaKnown RBP15.67■□□□□ 0.1
CD4-208ENST00000538827 KCND2Q9NZV8 630 aa15.67■□□□□ 0.1
CD4-208ENST00000538827 A6NJR5 290 aa15.66■□□□□ 0.1
CD4-208ENST00000538827 ZEB2O60315 1214 aa15.66■□□□□ 0.1
CD4-208ENST00000538827 HBP1O60381 514 aa15.66■□□□□ 0.1
CD4-208ENST00000538827 RHOBTB3O94955 611 aa15.66■□□□□ 0.1
CD4-208ENST00000538827 HOXD8P13378 290 aaPredicted RBP15.66■□□□□ 0.1
CD4-208ENST00000538827 CCL5P13501 91 aa15.66■□□□□ 0.1
CD4-208ENST00000538827 GAP43P17677 238 aa15.66■□□□□ 0.1
CD4-208ENST00000538827 RFC5P40937 340 aa15.66■□□□□ 0.1
CD4-208ENST00000538827 GJA9P57773 515 aa15.66■□□□□ 0.1
CD4-208ENST00000538827 HERC4Q5GLZ8 1057 aaPredicted RBP15.66■□□□□ 0.1
CD4-208ENST00000538827 FAM26FQ5R3K3 315 aa15.66■□□□□ 0.1
CD4-208ENST00000538827 ZNF658Q5TYW1 1059 aaPredicted RBP15.66■□□□□ 0.1
CD4-208ENST00000538827 KLHL10Q6JEL2 608 aa15.66■□□□□ 0.1
CD4-208ENST00000538827 GAS2L3Q86XJ1 694 aa15.66■□□□□ 0.1
CD4-208ENST00000538827 MYCT1Q8N699 235 aa15.66■□□□□ 0.1
CD4-208ENST00000538827 RNF214Q8ND24 703 aa15.66■□□□□ 0.1
CD4-208ENST00000538827 TRAPPC12Q8WVT3 735 aa15.66■□□□□ 0.1
CD4-208ENST00000538827 C16orf70Q9BSU1 422 aa15.66■□□□□ 0.1
CD4-208ENST00000538827 NIFKQ9BYG3 293 aaKnown RBP15.66■□□□□ 0.1
CD4-208ENST00000538827 RNF208Q9H0X6 261 aa15.66■□□□□ 0.1
CD4-208ENST00000538827 HMX1Q9NP08 348 aaPredicted RBP15.66■□□□□ 0.1
CD4-208ENST00000538827 SLC39A2Q9NP94 309 aa15.66■□□□□ 0.1
CD4-208ENST00000538827 GPRC5CQ9NQ84 441 aa15.66■□□□□ 0.1
CD4-208ENST00000538827 MTMR10Q9NXD2 777 aa15.66■□□□□ 0.1
CD4-208ENST00000538827 ODF2LQ9ULJ1 636 aa15.66■□□□□ 0.1
CD4-208ENST00000538827 CTNND2Q9UQB3 1225 aa15.66■□□□□ 0.1
CD4-208ENST00000538827 COL4A3BPQ9Y5P4 624 aa15.66■□□□□ 0.1
CD4-208ENST00000538827 SFI1A8K8P3 1242 aa15.65■□□□□ 0.1
CD4-208ENST00000538827 H3BRB1 525 aa15.65■□□□□ 0.1
CD4-208ENST00000538827 DGAT1O75907 488 aa15.65■□□□□ 0.1
CD4-208ENST00000538827 F2P00734 622 aa15.65■□□□□ 0.1
CD4-208ENST00000538827 BMP6P22004 513 aa15.65■□□□□ 0.1
CD4-208ENST00000538827 PSEN2P49810 448 aa15.65■□□□□ 0.1
CD4-208ENST00000538827 TBC1D8BQ0IIM8 1120 aa15.65■□□□□ 0.1
CD4-208ENST00000538827 PPFIA1Q13136 1202 aa15.65■□□□□ 0.1
CD4-208ENST00000538827 MFSD10Q14728 455 aa15.65■□□□□ 0.1
CD4-208ENST00000538827 LRIT3Q3SXY7 679 aa15.65■□□□□ 0.1
CD4-208ENST00000538827 GNASQ5JWF2 1037 aa15.65■□□□□ 0.1
CD4-208ENST00000538827 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.65■□□□□ 0.1
CD4-208ENST00000538827 MCPH1Q8NEM0 835 aa15.65■□□□□ 0.1
CD4-208ENST00000538827 SLC7A3Q8WY07 619 aa15.65■□□□□ 0.1
CD4-208ENST00000538827 DRC1Q96MC2 740 aa15.65■□□□□ 0.1
CD4-208ENST00000538827 TIPINQ9BVW5 301 aa15.65■□□□□ 0.1
CD4-208ENST00000538827 NAT10Q9H0A0 1025 aaKnown RBP15.65■□□□□ 0.1
CD4-208ENST00000538827 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.65■□□□□ 0.1
CD4-208ENST00000538827 POLR3FQ9H1D9 316 aaPredicted RBP15.65■□□□□ 0.1
CD4-208ENST00000538827 TUT1Q9H6E5 874 aaKnown RBP15.65■□□□□ 0.1
CD4-208ENST00000538827 PARVGQ9HBI0 331 aa15.65■□□□□ 0.1
CD4-208ENST00000538827 MSCO60682 206 aa15.64■□□□□ 0.09
CD4-208ENST00000538827 MAPK7Q13164 816 aa15.64■□□□□ 0.09
CD4-208ENST00000538827 STIM1Q13586 685 aa15.64■□□□□ 0.09
CD4-208ENST00000538827 KIAA0753Q2KHM9 967 aa15.64■□□□□ 0.09
CD4-208ENST00000538827 ZNF484Q5JVG2 852 aa15.64■□□□□ 0.09
CD4-208ENST00000538827 MLKLQ8NB16 471 aa15.64■□□□□ 0.09
CD4-208ENST00000538827 PPP1R13LQ8WUF5 828 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms