RNA–Protein interactions for RNA: ENST00000538696.5

CLN6-202, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-202ENST00000538696 HOXC8P31273 242 aa19.16■□□□□ 0.66
CLN6-202ENST00000538696 SOX10P56693 466 aa19.16■□□□□ 0.66
CLN6-202ENST00000538696 NLRP12P59046 1061 aa19.16■□□□□ 0.66
CLN6-202ENST00000538696 ZNF484Q5JVG2 852 aa19.16■□□□□ 0.66
CLN6-202ENST00000538696 NFRKBQ6P4R8 1299 aa19.16■□□□□ 0.66
CLN6-202ENST00000538696 UBE2Q1Q7Z7E8 422 aa19.16■□□□□ 0.66
CLN6-202ENST00000538696 C7orf31Q8N865 590 aa19.16■□□□□ 0.66
CLN6-202ENST00000538696 SLC43A3Q8NBI5 491 aa19.16■□□□□ 0.66
CLN6-202ENST00000538696 LMBR1Q8WVP7 490 aa19.16■□□□□ 0.66
CLN6-202ENST00000538696 CCDC34Q96HJ3 373 aa19.16■□□□□ 0.66
CLN6-202ENST00000538696 PAWRQ96IZ0 340 aaKnown RBP19.16■□□□□ 0.66
CLN6-202ENST00000538696 SENP6Q9GZR1 1112 aaPredicted RBP19.16■□□□□ 0.66
CLN6-202ENST00000538696 BHMT2Q9H2M3 363 aa19.16■□□□□ 0.66
CLN6-202ENST00000538696 CYP26B1Q9NR63 512 aa19.16■□□□□ 0.66
CLN6-202ENST00000538696 STK17AQ9UEE5 414 aa19.16■□□□□ 0.66
CLN6-202ENST00000538696 MAN1B1Q9UKM7 699 aa19.16■□□□□ 0.66
CLN6-202ENST00000538696 DNM3Q9UQ16 869 aa19.16■□□□□ 0.66
CLN6-202ENST00000538696 MYH11P35749 1972 aa19.16■□□□□ 0.66
CLN6-202ENST00000538696 GTPBP6O43824 516 aaPredicted RBP19.15■□□□□ 0.66
CLN6-202ENST00000538696 IGBP1P78318 339 aa19.15■□□□□ 0.66
CLN6-202ENST00000538696 DPYDQ12882 1025 aa19.15■□□□□ 0.66
CLN6-202ENST00000538696 MCM6Q14566 821 aa19.15■□□□□ 0.66
CLN6-202ENST00000538696 XKR9Q5GH70 373 aa19.15■□□□□ 0.66
CLN6-202ENST00000538696 FAM47CQ5HY64 1035 aa19.15■□□□□ 0.66
CLN6-202ENST00000538696 OTUD6AQ7L8S5 288 aa19.15■□□□□ 0.66
CLN6-202ENST00000538696 FAM200AQ8TCP9 573 aa19.15■□□□□ 0.66
CLN6-202ENST00000538696 LARP4BQ92615 738 aaKnown RBP19.15■□□□□ 0.66
CLN6-202ENST00000538696 SMARCE1Q969G3 411 aa19.15■□□□□ 0.66
CLN6-202ENST00000538696 CEP170P1Q96L14 293 aa19.15■□□□□ 0.66
CLN6-202ENST00000538696 SETD4Q9NVD3 440 aa19.15■□□□□ 0.66
CLN6-202ENST00000538696 GTF2IRD1Q9UHL9 959 aa19.15■□□□□ 0.66
CLN6-202ENST00000538696 NRCAMQ92823 1304 aa19.14■□□□□ 0.65
CLN6-202ENST00000538696 C17orf102A2RUQ5 167 aa19.14■□□□□ 0.65
CLN6-202ENST00000538696 ARHGEF35A5YM69 484 aa19.14■□□□□ 0.65
CLN6-202ENST00000538696 CCDC85CA6NKD9 419 aa19.14■□□□□ 0.65
CLN6-202ENST00000538696 ARVCFO00192 962 aa19.14■□□□□ 0.65
CLN6-202ENST00000538696 C22orf31O95567 290 aa19.14■□□□□ 0.65
CLN6-202ENST00000538696 PLA2G4BP0C869 781 aa19.14■□□□□ 0.65
CLN6-202ENST00000538696 SARSP49591 514 aaKnown RBP19.14■□□□□ 0.65
CLN6-202ENST00000538696 ADAM17P78536 824 aa19.14■□□□□ 0.65
CLN6-202ENST00000538696 PTPN11Q06124 597 aaPredicted RBP19.14■□□□□ 0.65
CLN6-202ENST00000538696 DPCR1Q3MIW9 517 aa19.14■□□□□ 0.65
CLN6-202ENST00000538696 MARCH8Q5T0T0 291 aa19.14■□□□□ 0.65
CLN6-202ENST00000538696 ISM2Q6H9L7 571 aa19.14■□□□□ 0.65
CLN6-202ENST00000538696 GDF6Q6KF10 455 aaPredicted RBP19.14■□□□□ 0.65
CLN6-202ENST00000538696 ZBTB10Q96DT7 871 aa19.14■□□□□ 0.65
CLN6-202ENST00000538696 CCDC43Q96MW1 224 aaKnown RBP19.14■□□□□ 0.65
CLN6-202ENST00000538696 BLZF1Q9H2G9 400 aa19.14■□□□□ 0.65
CLN6-202ENST00000538696 CUEDC2Q9H467 287 aa19.14■□□□□ 0.65
CLN6-202ENST00000538696 CBX8Q9HC52 389 aa19.14■□□□□ 0.65
CLN6-202ENST00000538696 RRN3P2A6NIE6 340 aa19.13■□□□□ 0.65
CLN6-202ENST00000538696 SMC2O95347 1197 aa19.13■□□□□ 0.65
CLN6-202ENST00000538696 CDK7P50613 346 aa19.13■□□□□ 0.65
CLN6-202ENST00000538696 ATN1P54259 1190 aaPredicted RBP19.13■□□□□ 0.65
CLN6-202ENST00000538696 SLC12A3P55017 1021 aa19.13■□□□□ 0.65
CLN6-202ENST00000538696 ZNF200P98182 395 aaPredicted RBP19.13■□□□□ 0.65
CLN6-202ENST00000538696 CUL4BQ13620 913 aa19.13■□□□□ 0.65
CLN6-202ENST00000538696 SNX17Q15036 470 aa19.13■□□□□ 0.65
CLN6-202ENST00000538696 NT5DC1Q5TFE4 455 aa19.13■□□□□ 0.65
CLN6-202ENST00000538696 SLC39A5Q6ZMH5 540 aa19.13■□□□□ 0.65
CLN6-202ENST00000538696 NECAB2Q7Z6G3 386 aa19.13■□□□□ 0.65
CLN6-202ENST00000538696 SYT2Q8N9I0 419 aaPredicted RBP19.13■□□□□ 0.65
CLN6-202ENST00000538696 MAGEF1Q9HAY2 307 aa19.13■□□□□ 0.65
CLN6-202ENST00000538696 BMP2KQ9NSY1 1161 aaPredicted RBP19.13■□□□□ 0.65
CLN6-202ENST00000538696 PPME1Q9Y570 386 aa19.13■□□□□ 0.65
CLN6-202ENST00000538696 MBLAC1A4D2B0 266 aaPredicted RBP19.12■□□□□ 0.65
CLN6-202ENST00000538696 USO1O60763 962 aaKnown RBP19.12■□□□□ 0.65
CLN6-202ENST00000538696 SSBP05455 408 aaKnown RBP eCLIP19.12■□□□□ 0.65
CLN6-202ENST00000538696 PADI6Q6TGC4 694 aa19.12■□□□□ 0.65
CLN6-202ENST00000538696 MTHFD1LQ6UB35 978 aa19.12■□□□□ 0.65
CLN6-202ENST00000538696 SPATA20Q8TB22 786 aa19.12■□□□□ 0.65
CLN6-202ENST00000538696 CTAGE1Q96RT6 745 aa19.12■□□□□ 0.65
CLN6-202ENST00000538696 RUSC1Q9BVN2 902 aa19.12■□□□□ 0.65
CLN6-202ENST00000538696 DHX33Q9H6R0 707 aaKnown RBP19.12■□□□□ 0.65
CLN6-202ENST00000538696 KBTBD4Q9NVX7 518 aa19.12■□□□□ 0.65
CLN6-202ENST00000538696 SIP14410 1827 aa19.12■□□□□ 0.65
CLN6-202ENST00000538696 TREHO43280 583 aa19.11■□□□□ 0.65
CLN6-202ENST00000538696 BMP6P22004 513 aa19.11■□□□□ 0.65
CLN6-202ENST00000538696 KLRC1P26715 233 aa19.11■□□□□ 0.65
CLN6-202ENST00000538696 RFC5P40937 340 aa19.11■□□□□ 0.65
CLN6-202ENST00000538696 ZNF165P49910 485 aa19.11■□□□□ 0.65
CLN6-202ENST00000538696 TBC1D8BQ0IIM8 1120 aa19.11■□□□□ 0.65
CLN6-202ENST00000538696 MORC3Q14149 939 aa19.11■□□□□ 0.65
CLN6-202ENST00000538696 DHX8Q14562 1220 aaKnown RBP19.11■□□□□ 0.65
CLN6-202ENST00000538696 EMC2Q15006 297 aa19.11■□□□□ 0.65
CLN6-202ENST00000538696 FAM126BQ8IXS8 530 aa19.11■□□□□ 0.65
CLN6-202ENST00000538696 SEZ6LQ9BYH1 1024 aa19.11■□□□□ 0.65
CLN6-202ENST00000538696 XPNPEP1Q9NQW7 623 aa19.11■□□□□ 0.65
CLN6-202ENST00000538696 TRMT13Q9NUP7 481 aaKnown RBP19.11■□□□□ 0.65
CLN6-202ENST00000538696 IGKV6-21A0A0C4DH24 114 aa19.1■□□□□ 0.65
CLN6-202ENST00000538696 MAFO75444 373 aaPredicted RBP19.1■□□□□ 0.65
CLN6-202ENST00000538696 DGAT1O75907 488 aa19.1■□□□□ 0.65
CLN6-202ENST00000538696 GNAT1P11488 350 aa19.1■□□□□ 0.65
CLN6-202ENST00000538696 CYP11B2P19099 503 aa19.1■□□□□ 0.65
CLN6-202ENST00000538696 POLGP54098 1239 aaPredicted RBP19.1■□□□□ 0.65
CLN6-202ENST00000538696 LRRC26Q2I0M4 334 aa19.1■□□□□ 0.65
CLN6-202ENST00000538696 UVSSAQ2YD98 709 aa19.1■□□□□ 0.65
CLN6-202ENST00000538696 TRIM60Q495X7 471 aa19.1■□□□□ 0.65
CLN6-202ENST00000538696 C1orf53Q5VUE5 145 aa19.1■□□□□ 0.65
CLN6-202ENST00000538696 RINT1Q6NUQ1 792 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms