RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 SLC9A1P19634 815 aa20.15■□□□□ 0.82
SFSWAP-207ENST00000538548 PLTPP55058 493 aa20.15■□□□□ 0.82
SFSWAP-207ENST00000538548 COPS2P61201 443 aa20.15■□□□□ 0.82
SFSWAP-207ENST00000538548 BNIP1Q12981 228 aa20.15■□□□□ 0.82
SFSWAP-207ENST00000538548 BLMHQ13867 455 aa20.15■□□□□ 0.82
SFSWAP-207ENST00000538548 DHX34Q14147 1143 aaKnown RBP20.15■□□□□ 0.82
SFSWAP-207ENST00000538548 BTNL9Q6UXG8 535 aa20.15■□□□□ 0.82
SFSWAP-207ENST00000538548 IFT74Q96LB3 600 aa20.15■□□□□ 0.82
SFSWAP-207ENST00000538548 TMEM47Q9BQJ4 181 aa20.15■□□□□ 0.82
SFSWAP-207ENST00000538548 FGFBP2Q9BYJ0 223 aa20.15■□□□□ 0.82
SFSWAP-207ENST00000538548 KCTD10Q9H3F6 313 aa20.15■□□□□ 0.82
SFSWAP-207ENST00000538548 SPATA31A5Q5VU36 1347 aa20.15■□□□□ 0.82
SFSWAP-207ENST00000538548 SPATA31A7Q8IWB4 1347 aa20.15■□□□□ 0.82
SFSWAP-207ENST00000538548 WTIPA6NIX2 430 aaPredicted RBP20.15■□□□□ 0.82
SFSWAP-207ENST00000538548 SMIM23A6NLE4 172 aa20.15■□□□□ 0.82
SFSWAP-207ENST00000538548 SLC37A4O43826 429 aa20.15■□□□□ 0.82
SFSWAP-207ENST00000538548 TSPY3P0CV98 308 aa20.15■□□□□ 0.82
SFSWAP-207ENST00000538548 TSPY8P0CW00 308 aa20.15■□□□□ 0.82
SFSWAP-207ENST00000538548 PEX19P40855 299 aa20.15■□□□□ 0.82
SFSWAP-207ENST00000538548 IFNAR2P48551 515 aa20.15■□□□□ 0.82
SFSWAP-207ENST00000538548 CCNG1P51959 295 aa20.15■□□□□ 0.82
SFSWAP-207ENST00000538548 MKRN4PQ13434 485 aaPredicted RBP20.15■□□□□ 0.82
SFSWAP-207ENST00000538548 SLC4A8Q2Y0W8 1093 aa20.15■□□□□ 0.82
SFSWAP-207ENST00000538548 KIAA1755Q5JYT7 1200 aa20.15■□□□□ 0.82
SFSWAP-207ENST00000538548 C12orf60Q5U649 245 aa20.15■□□□□ 0.82
SFSWAP-207ENST00000538548 PPP4R3CPQ6ZMV5 832 aa20.15■□□□□ 0.82
SFSWAP-207ENST00000538548 CD2APQ9Y5K6 639 aa20.15■□□□□ 0.82
SFSWAP-207ENST00000538548 BCL9O00512 1426 aa20.14■□□□□ 0.82
SFSWAP-207ENST00000538548 CETN3O15182 167 aa20.14■□□□□ 0.82
SFSWAP-207ENST00000538548 CNGA2Q16280 664 aa20.14■□□□□ 0.82
SFSWAP-207ENST00000538548 EDRF1Q3B7T1 1238 aa20.14■□□□□ 0.82
SFSWAP-207ENST00000538548 PARP10Q53GL7 1025 aa20.14■□□□□ 0.82
SFSWAP-207ENST00000538548 TNFAIP8L3Q5GJ75 292 aa20.14■□□□□ 0.82
SFSWAP-207ENST00000538548 TAOK1Q7L7X3 1001 aa20.14■□□□□ 0.82
SFSWAP-207ENST00000538548 RBM46Q8TBY0 533 aaKnown RBP20.14■□□□□ 0.82
SFSWAP-207ENST00000538548 FBXO25Q8TCJ0 367 aa20.14■□□□□ 0.82
SFSWAP-207ENST00000538548 PRCCQ92733 491 aaPredicted RBP20.14■□□□□ 0.82
SFSWAP-207ENST00000538548 CPVLQ9H3G5 476 aa20.14■□□□□ 0.82
SFSWAP-207ENST00000538548 MKNK2Q9HBH9 465 aa20.14■□□□□ 0.82
SFSWAP-207ENST00000538548 ARHGEF3Q9NR81 526 aa20.14■□□□□ 0.82
SFSWAP-207ENST00000538548 TBC1D7Q9P0N9 293 aa20.14■□□□□ 0.82
SFSWAP-207ENST00000538548 HDAC9Q9UKV0 1011 aa20.14■□□□□ 0.82
SFSWAP-207ENST00000538548 STX8Q9UNK0 236 aa20.14■□□□□ 0.82
SFSWAP-207ENST00000538548 PCDHA2Q9Y5H9 948 aa20.14■□□□□ 0.82
SFSWAP-207ENST00000538548 ESYT2A0FGR8 921 aa20.14■□□□□ 0.81
SFSWAP-207ENST00000538548 SUN1O94901 812 aa20.14■□□□□ 0.81
SFSWAP-207ENST00000538548 ZDHHC24Q6UX98 284 aa20.14■□□□□ 0.81
SFSWAP-207ENST00000538548 CARD9Q9H257 536 aa20.14■□□□□ 0.81
SFSWAP-207ENST00000538548 SEC63Q9UGP8 760 aaKnown RBP20.14■□□□□ 0.81
SFSWAP-207ENST00000538548 RPTORQ8N122 1335 aa20.14■□□□□ 0.81
SFSWAP-207ENST00000538548 KRT16P08779 473 aa20.13■□□□□ 0.81
SFSWAP-207ENST00000538548 ATP2A2P16615 1042 aaKnown RBP20.13■□□□□ 0.81
SFSWAP-207ENST00000538548 BIRC2Q13490 618 aa20.13■□□□□ 0.81
SFSWAP-207ENST00000538548 EXOC3L4Q17RC7 722 aa20.13■□□□□ 0.81
SFSWAP-207ENST00000538548 ERICH1Q86X53 443 aa20.13■□□□□ 0.81
SFSWAP-207ENST00000538548 JAMLQ86YT9 394 aa20.13■□□□□ 0.81
SFSWAP-207ENST00000538548 CCDC65Q8IXS2 484 aa20.13■□□□□ 0.81
SFSWAP-207ENST00000538548 SCFD1Q8WVM8 642 aa20.13■□□□□ 0.81
SFSWAP-207ENST00000538548 ANKRD27Q96NW4 1050 aa20.13■□□□□ 0.81
SFSWAP-207ENST00000538548 RASAL2Q9UJF2 1139 aa20.13■□□□□ 0.81
SFSWAP-207ENST00000538548 ITGB4P16144 1822 aa20.13■□□□□ 0.81
SFSWAP-207ENST00000538548 KIAA0391O15091 583 aaKnown RBP20.13■□□□□ 0.81
SFSWAP-207ENST00000538548 MSH2P43246 934 aa20.13■□□□□ 0.81
SFSWAP-207ENST00000538548 INHBEP58166 350 aa20.13■□□□□ 0.81
SFSWAP-207ENST00000538548 ANKRD20A2Q5SQ80 823 aa20.13■□□□□ 0.81
SFSWAP-207ENST00000538548 ANKRD20A1Q5TYW2 823 aa20.13■□□□□ 0.81
SFSWAP-207ENST00000538548 ANKRD20A3Q5VUR7 823 aa20.13■□□□□ 0.81
SFSWAP-207ENST00000538548 SPICE1Q8N0Z3 855 aa20.13■□□□□ 0.81
SFSWAP-207ENST00000538548 DYNLL2Q96FJ2 89 aa20.13■□□□□ 0.81
SFSWAP-207ENST00000538548 PLCD4Q9BRC7 762 aa20.13■□□□□ 0.81
SFSWAP-207ENST00000538548 TMEM260Q9NX78 707 aa20.13■□□□□ 0.81
SFSWAP-207ENST00000538548 O00370 1275 aa20.12■□□□□ 0.81
SFSWAP-207ENST00000538548 DDX3YO15523 660 aaKnown RBP20.12■□□□□ 0.81
SFSWAP-207ENST00000538548 TDP2O95551 362 aa20.12■□□□□ 0.81
SFSWAP-207ENST00000538548 BRD2P25440 801 aaKnown RBP20.12■□□□□ 0.81
SFSWAP-207ENST00000538548 PON1P27169 355 aa20.12■□□□□ 0.81
SFSWAP-207ENST00000538548 GBP1P32455 592 aa20.12■□□□□ 0.81
SFSWAP-207ENST00000538548 LACTBP83111 547 aaPredicted RBP20.12■□□□□ 0.81
SFSWAP-207ENST00000538548 MAPK7Q13164 816 aa20.12■□□□□ 0.81
SFSWAP-207ENST00000538548 CLUL1Q15846 466 aa20.12■□□□□ 0.81
SFSWAP-207ENST00000538548 ECM1Q16610 540 aa20.12■□□□□ 0.81
SFSWAP-207ENST00000538548 DCAF12L1Q5VU92 463 aa20.12■□□□□ 0.81
SFSWAP-207ENST00000538548 GLG1Q92896 1179 aa20.12■□□□□ 0.81
SFSWAP-207ENST00000538548 EMILIN3Q9NT22 766 aa20.12■□□□□ 0.81
SFSWAP-207ENST00000538548 SNX24Q9Y343 169 aa20.12■□□□□ 0.81
SFSWAP-207ENST00000538548 EME2A4GXA9 379 aaPredicted RBP20.12■□□□□ 0.81
SFSWAP-207ENST00000538548 DDX3XO00571 662 aaKnown RBP eCLIP20.12■□□□□ 0.814e-7■□□□□ 8.8
SFSWAP-207ENST00000538548 AFPP02771 609 aaKnown RBP20.12■□□□□ 0.81
SFSWAP-207ENST00000538548 CDC25CP30307 473 aa20.12■□□□□ 0.81
SFSWAP-207ENST00000538548 ATP11AP98196 1134 aa20.12■□□□□ 0.81
SFSWAP-207ENST00000538548 PRPF4BQ13523 1007 aaKnown RBP20.12■□□□□ 0.81
SFSWAP-207ENST00000538548 AP1ARQ63HQ0 302 aa20.12■□□□□ 0.81
SFSWAP-207ENST00000538548 TBC1D16Q8TBP0 767 aa20.12■□□□□ 0.81
SFSWAP-207ENST00000538548 SEMA4AQ9H3S1 761 aa20.12■□□□□ 0.81
SFSWAP-207ENST00000538548 GGT7Q9UJ14 662 aa20.12■□□□□ 0.81
SFSWAP-207ENST00000538548 COL4A1P02462 1669 aa20.12■□□□□ 0.81
SFSWAP-207ENST00000538548 ROBO3Q96MS0 1386 aa20.11■□□□□ 0.81
SFSWAP-207ENST00000538548 KLHL33A6NCF5 533 aa20.11■□□□□ 0.81
SFSWAP-207ENST00000538548 NR2F2P24468 414 aa20.11■□□□□ 0.81
SFSWAP-207ENST00000538548 ASRGL1Q7L266 308 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms