RNA–Protein interactions for RNA: ENST00000538333.3

LIMK1-208, Transcript of LIM domain kinase 1, humanhuman

TSL 2 BASIC

Gene LIMK1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-208ENST00000538333 ITIH3Q06033 890 aa15.35■□□□□ 0.05
LIMK1-208ENST00000538333 NAB2Q15742 525 aa15.35■□□□□ 0.05
LIMK1-208ENST00000538333 FAM186BQ8IYM0 893 aa15.35■□□□□ 0.05
LIMK1-208ENST00000538333 MSL3Q8N5Y2 521 aaKnown RBP15.35■□□□□ 0.05
LIMK1-208ENST00000538333 DRC1Q96MC2 740 aa15.35■□□□□ 0.05
LIMK1-208ENST00000538333 TLR10Q9BXR5 811 aa15.35■□□□□ 0.05
LIMK1-208ENST00000538333 AGPAT3Q9NRZ7 376 aa15.35■□□□□ 0.05
LIMK1-208ENST00000538333 PKD2L1Q9P0L9 805 aa15.35■□□□□ 0.05
LIMK1-208ENST00000538333 AJAP1Q9UKB5 411 aaPredicted RBP15.35■□□□□ 0.05
LIMK1-208ENST00000538333 HYOU1Q9Y4L1 999 aa15.35■□□□□ 0.05
LIMK1-208ENST00000538333 BUB1O43683 1085 aa15.34■□□□□ 0.05
LIMK1-208ENST00000538333 FLOT1O75955 427 aa15.34■□□□□ 0.05
LIMK1-208ENST00000538333 ZBTB7AO95365 584 aa15.34■□□□□ 0.05
LIMK1-208ENST00000538333 TCP1P17987 556 aaKnown RBP15.34■□□□□ 0.05
LIMK1-208ENST00000538333 KLRC1P26715 233 aa15.34■□□□□ 0.05
LIMK1-208ENST00000538333 PRKCIP41743 596 aa15.34■□□□□ 0.05
LIMK1-208ENST00000538333 RPS6P62753 249 aaKnown RBP15.34■□□□□ 0.05
LIMK1-208ENST00000538333 MTMR2Q13614 643 aa15.34■□□□□ 0.05
LIMK1-208ENST00000538333 SMC1AQ14683 1233 aaKnown RBP15.34■□□□□ 0.05
LIMK1-208ENST00000538333 NFRKBQ6P4R8 1299 aa15.34■□□□□ 0.05
LIMK1-208ENST00000538333 STXBP4Q6ZWJ1 553 aa15.34■□□□□ 0.05
LIMK1-208ENST00000538333 SAMD7Q7Z3H4 446 aa15.34■□□□□ 0.05
LIMK1-208ENST00000538333 ZNF571Q7Z3V5 609 aaPredicted RBP15.34■□□□□ 0.05
LIMK1-208ENST00000538333 SPAG5Q96R06 1193 aa15.34■□□□□ 0.05
LIMK1-208ENST00000538333 GBP3Q9H0R5 595 aa15.34■□□□□ 0.05
LIMK1-208ENST00000538333 SUGCTQ9HAC7 445 aa15.34■□□□□ 0.05
LIMK1-208ENST00000538333 LUC7LQ9NQ29 371 aaKnown RBP15.34■□□□□ 0.05
LIMK1-208ENST00000538333 GCNT4Q9P109 453 aa15.34■□□□□ 0.05
LIMK1-208ENST00000538333 ZHX2Q9Y6X8 837 aa15.34■□□□□ 0.05
LIMK1-208ENST00000538333 COL11A1P12107 1806 aaPredicted RBP15.34■□□□□ 0.05
LIMK1-208ENST00000538333 SPP2Q13103 211 aa15.34■□□□□ 0.05
LIMK1-208ENST00000538333 PADI6Q6TGC4 694 aa15.34■□□□□ 0.05
LIMK1-208ENST00000538333 HS2ST1Q7LGA3 356 aa15.34■□□□□ 0.05
LIMK1-208ENST00000538333 HDXQ7Z353 690 aa15.34■□□□□ 0.05
LIMK1-208ENST00000538333 MICALL2Q8IY33 904 aa15.34■□□□□ 0.05
LIMK1-208ENST00000538333 CAGE1Q8TC20 777 aa15.34■□□□□ 0.05
LIMK1-208ENST00000538333 TAAR1Q96RJ0 339 aa15.34■□□□□ 0.05
LIMK1-208ENST00000538333 HOMER2Q9NSB8 354 aa15.34■□□□□ 0.05
LIMK1-208ENST00000538333 DBR1Q9UK59 544 aaKnown RBP15.34■□□□□ 0.05
LIMK1-208ENST00000538333 BZW2Q9Y6E2 419 aaKnown RBP15.34■□□□□ 0.05
LIMK1-208ENST00000538333 LYPLA2O95372 231 aa15.33■□□□□ 0.04
LIMK1-208ENST00000538333 GMPSP49915 693 aaPredicted RBP15.33■□□□□ 0.04
LIMK1-208ENST00000538333 MTMR1Q13613 665 aa15.33■□□□□ 0.04
LIMK1-208ENST00000538333 R3HDM1Q15032 1099 aaKnown RBP15.33■□□□□ 0.04
LIMK1-208ENST00000538333 PGM5Q15124 567 aa15.33■□□□□ 0.04
LIMK1-208ENST00000538333 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.33■□□□□ 0.04
LIMK1-208ENST00000538333 PACSIN1Q9BY11 444 aa15.33■□□□□ 0.04
LIMK1-208ENST00000538333 RPAP3Q9H6T3 665 aaPredicted RBP15.33■□□□□ 0.04
LIMK1-208ENST00000538333 RNF216Q9NWF9 866 aaPredicted RBP15.33■□□□□ 0.04
LIMK1-208ENST00000538333 HACL1Q9UJ83 578 aa15.33■□□□□ 0.04
LIMK1-208ENST00000538333 NENFQ9UMX5 172 aa15.33■□□□□ 0.04
LIMK1-208ENST00000538333 PCDHGC5Q9Y5F6 944 aa15.33■□□□□ 0.04
LIMK1-208ENST00000538333 WDR81Q562E7 1941 aa15.33■□□□□ 0.04
LIMK1-208ENST00000538333 BTNL10A8MVZ5 291 aa15.32■□□□□ 0.04
LIMK1-208ENST00000538333 NCK2O43639 380 aa15.32■□□□□ 0.04
LIMK1-208ENST00000538333 RARRES1P49788 294 aa15.32■□□□□ 0.04
LIMK1-208ENST00000538333 C2orf54Q08AI8 447 aa15.32■□□□□ 0.04
LIMK1-208ENST00000538333 ENOX2Q16206 610 aaKnown RBP15.32■□□□□ 0.04
LIMK1-208ENST00000538333 KIAA0753Q2KHM9 967 aa15.32■□□□□ 0.04
LIMK1-208ENST00000538333 NBPF12Q5TAG4 269 aaPredicted RBP15.32■□□□□ 0.04
LIMK1-208ENST00000538333 IQCEQ6IPM2 695 aa15.32■□□□□ 0.04
LIMK1-208ENST00000538333 SLC9A9Q8IVB4 645 aa15.32■□□□□ 0.04
LIMK1-208ENST00000538333 MMGT1Q8N4V1 131 aa15.32■□□□□ 0.04
LIMK1-208ENST00000538333 PPP1R12BO60237 982 aaPredicted RBP15.32■□□□□ 0.04
LIMK1-208ENST00000538333 EIF2AK2P19525 551 aaKnown RBP15.32■□□□□ 0.04
LIMK1-208ENST00000538333 OAS2P29728 719 aaKnown RBP15.32■□□□□ 0.04
LIMK1-208ENST00000538333 FMO5P49326 533 aa15.32■□□□□ 0.04
LIMK1-208ENST00000538333 C10orf76Q5T2E6 689 aa15.32■□□□□ 0.04
LIMK1-208ENST00000538333 GOLGA5Q8TBA6 731 aa15.32■□□□□ 0.04
LIMK1-208ENST00000538333 TBC1D22BQ9NU19 505 aa15.32■□□□□ 0.04
LIMK1-208ENST00000538333 PHIPQ8WWQ0 1821 aa15.32■□□□□ 0.04
LIMK1-208ENST00000538333 VWA5AO00534 786 aa15.31■□□□□ 0.04
LIMK1-208ENST00000538333 PALMO75781 387 aa15.31■□□□□ 0.04
LIMK1-208ENST00000538333 MAPTP10636 758 aaKnown RBP15.31■□□□□ 0.04
LIMK1-208ENST00000538333 MCM3P25205 808 aa15.31■□□□□ 0.04
LIMK1-208ENST00000538333 ANXA13P27216 316 aa15.31■□□□□ 0.04
LIMK1-208ENST00000538333 CXCR5P32302 372 aa15.31■□□□□ 0.04
LIMK1-208ENST00000538333 QARSP47897 775 aaKnown RBP15.31■□□□□ 0.04
LIMK1-208ENST00000538333 PPP2R5AQ15172 486 aa15.31■□□□□ 0.04
LIMK1-208ENST00000538333 TBC1D10BQ4KMP7 808 aaPredicted RBP15.31■□□□□ 0.04
LIMK1-208ENST00000538333 GJB7Q6PEY0 223 aa15.31■□□□□ 0.04
LIMK1-208ENST00000538333 SPATA4Q8NEY3 305 aa15.31■□□□□ 0.04
LIMK1-208ENST00000538333 TMEM174Q8WUU8 243 aa15.31■□□□□ 0.04
LIMK1-208ENST00000538333 WNK4Q96J92 1243 aa15.31■□□□□ 0.04
LIMK1-208ENST00000538333 TRERF1Q96PN7 1200 aa15.31■□□□□ 0.04
LIMK1-208ENST00000538333 PDCD2LQ9BRP1 358 aa15.31■□□□□ 0.04
LIMK1-208ENST00000538333 PXMP2Q9NR77 195 aa15.31■□□□□ 0.04
LIMK1-208ENST00000538333 CNOT7Q9UIV1 285 aaKnown RBP15.31■□□□□ 0.04
LIMK1-208ENST00000538333 TSKSQ9UJT2 592 aa15.31■□□□□ 0.04
LIMK1-208ENST00000538333 NAGPAQ9UK23 515 aa15.31■□□□□ 0.04
LIMK1-208ENST00000538333 PNMA2Q9UL42 364 aa15.31■□□□□ 0.04
LIMK1-208ENST00000538333 ATP8B3O60423 1300 aa15.31■□□□□ 0.04
LIMK1-208ENST00000538333 LTBP3Q9NS15 1303 aa15.31■□□□□ 0.04
LIMK1-208ENST00000538333 H3BQF6 201 aa15.31■□□□□ 0.04
LIMK1-208ENST00000538333 FZD9O00144 591 aa15.31■□□□□ 0.04
LIMK1-208ENST00000538333 FDX1P10109 184 aa15.31■□□□□ 0.04
LIMK1-208ENST00000538333 CYP2J2P51589 502 aa15.31■□□□□ 0.04
LIMK1-208ENST00000538333 FAM193AP78312 1265 aa15.31■□□□□ 0.04
LIMK1-208ENST00000538333 MYBPC2Q14324 1141 aa15.31■□□□□ 0.04
LIMK1-208ENST00000538333 CASP8Q14790 479 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms