RNA–Protein interactions for RNA: ENST00000538070.1

UBE3B-208, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,655 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-208ENST00000538070 DLK2Q6UY11 383 aa9.5□□□□□ -0.89
UBE3B-208ENST00000538070 PEX26Q7Z412 305 aa9.5□□□□□ -0.89
UBE3B-208ENST00000538070 DDX42Q86XP3 938 aaKnown RBP eCLIP9.5□□□□□ -0.89
UBE3B-208ENST00000538070 NACC1Q96RE7 527 aa9.5□□□□□ -0.89
UBE3B-208ENST00000538070 COL20A1Q9P218 1284 aa9.5□□□□□ -0.89
UBE3B-208ENST00000538070 FAM184BQ9ULE4 1060 aa9.5□□□□□ -0.89
UBE3B-208ENST00000538070 ASTN1O14525 1302 aa9.5□□□□□ -0.89
UBE3B-208ENST00000538070 MAST2Q6P0Q8 1798 aa9.5□□□□□ -0.89
UBE3B-208ENST00000538070 DLEC1Q9Y238 1755 aa9.5□□□□□ -0.89
UBE3B-208ENST00000538070 CYP3A7-CYP3A51PA0A087WV96 503 aa9.5□□□□□ -0.89
UBE3B-208ENST00000538070 CCDC66A2RUB6 948 aa9.5□□□□□ -0.89
UBE3B-208ENST00000538070 GOLGA6BA6NDN3 693 aa9.5□□□□□ -0.89
UBE3B-208ENST00000538070 CALCAP01258 141 aa9.5□□□□□ -0.89
UBE3B-208ENST00000538070 KRT13P13646 458 aa9.5□□□□□ -0.89
UBE3B-208ENST00000538070 ITGB5P18084 799 aa9.5□□□□□ -0.89
UBE3B-208ENST00000538070 CYP3A7P24462 503 aa9.5□□□□□ -0.89
UBE3B-208ENST00000538070 SSTR3P32745 418 aaPredicted RBP9.5□□□□□ -0.89
UBE3B-208ENST00000538070 STAT1P42224 750 aa9.5□□□□□ -0.89
UBE3B-208ENST00000538070 ATP1A2P50993 1020 aa9.5□□□□□ -0.89
UBE3B-208ENST00000538070 DRAP1Q14919 205 aaPredicted RBP9.5□□□□□ -0.89
UBE3B-208ENST00000538070 MAATS1Q7Z4T9 603 aa9.5□□□□□ -0.89
UBE3B-208ENST00000538070 RBM46Q8TBY0 533 aaKnown RBP9.5□□□□□ -0.89
UBE3B-208ENST00000538070 FAM107BQ9H098 131 aa9.5□□□□□ -0.89
UBE3B-208ENST00000538070 UBE2TQ9NPD8 197 aaPredicted RBP9.5□□□□□ -0.89
UBE3B-208ENST00000538070 RSPH14Q9UHP6 348 aa9.5□□□□□ -0.89
UBE3B-208ENST00000538070 IGLV3-22A0A075B6J6 115 aa9.5□□□□□ -0.89
UBE3B-208ENST00000538070 TGFB1I1O43294 461 aa9.5□□□□□ -0.89
UBE3B-208ENST00000538070 DLATP10515 647 aaKnown RBP9.5□□□□□ -0.89
UBE3B-208ENST00000538070 TNFAIP3P21580 790 aa9.5□□□□□ -0.89
UBE3B-208ENST00000538070 CARSP49589 748 aaKnown RBP9.5□□□□□ -0.89
UBE3B-208ENST00000538070 DLG4P78352 724 aa9.5□□□□□ -0.89
UBE3B-208ENST00000538070 ZNF211Q13398 564 aaPredicted RBP9.5□□□□□ -0.89
UBE3B-208ENST00000538070 CBWD6Q4V339 395 aa9.5□□□□□ -0.89
UBE3B-208ENST00000538070 CBWD3Q5JTY5 395 aa9.5□□□□□ -0.89
UBE3B-208ENST00000538070 CBWD5Q5RIA9 395 aa9.5□□□□□ -0.89
UBE3B-208ENST00000538070 ARHGEF16Q5VV41 709 aa9.5□□□□□ -0.89
UBE3B-208ENST00000538070 LMBRD2Q68DH5 695 aaPredicted RBP9.5□□□□□ -0.89
UBE3B-208ENST00000538070 HOMEZQ8IX15 550 aa9.5□□□□□ -0.89
UBE3B-208ENST00000538070 SLC35C1Q96A29 364 aa9.5□□□□□ -0.89
UBE3B-208ENST00000538070 BICD1Q96G01 975 aa9.5□□□□□ -0.89
UBE3B-208ENST00000538070 RMDN3Q96TC7 470 aa9.5□□□□□ -0.89
UBE3B-208ENST00000538070 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.5□□□□□ -0.89
UBE3B-208ENST00000538070 RAB21Q9UL25 225 aa9.5□□□□□ -0.89
UBE3B-208ENST00000538070 PDXKO00764 312 aa9.49□□□□□ -0.89
UBE3B-208ENST00000538070 BACH1O14867 736 aa9.49□□□□□ -0.89
UBE3B-208ENST00000538070 ASNSP08243 561 aa9.49□□□□□ -0.89
UBE3B-208ENST00000538070 H2AFZP0C0S5 128 aa9.49□□□□□ -0.89
UBE3B-208ENST00000538070 MTMR1Q13613 665 aa9.49□□□□□ -0.89
UBE3B-208ENST00000538070 CIAPIN1Q6FI81 312 aa9.49□□□□□ -0.89
UBE3B-208ENST00000538070 CCNI2Q6ZMN8 369 aaPredicted RBP9.49□□□□□ -0.89
UBE3B-208ENST00000538070 H2AFVQ71UI9 128 aa9.49□□□□□ -0.89
UBE3B-208ENST00000538070 PPM1KQ8N3J5 372 aa9.49□□□□□ -0.89
UBE3B-208ENST00000538070 POP1Q99575 1024 aaKnown RBP9.49□□□□□ -0.89
UBE3B-208ENST00000538070 CBWD1Q9BRT8 395 aa9.49□□□□□ -0.89
UBE3B-208ENST00000538070 DDX47Q9H0S4 455 aaKnown RBP9.49□□□□□ -0.89
UBE3B-208ENST00000538070 DPH5Q9H2P9 285 aa9.49□□□□□ -0.89
UBE3B-208ENST00000538070 OSGEPQ9NPF4 335 aa9.49□□□□□ -0.89
UBE3B-208ENST00000538070 ZNRF3Q9ULT6 936 aa9.49□□□□□ -0.89
UBE3B-208ENST00000538070 SLX4Q8IY92 1834 aa9.49□□□□□ -0.89
UBE3B-208ENST00000538070 UBR3Q6ZT12 1888 aa9.49□□□□□ -0.89
UBE3B-208ENST00000538070 MYH4Q9Y623 1939 aa9.49□□□□□ -0.89
UBE3B-208ENST00000538070 ANO9A1A5B4 782 aa9.49□□□□□ -0.89
UBE3B-208ENST00000538070 EVI5O60447 810 aa9.49□□□□□ -0.89
UBE3B-208ENST00000538070 RPS6P62753 249 aaKnown RBP9.49□□□□□ -0.89
UBE3B-208ENST00000538070 EEPD1Q7L9B9 569 aa9.49□□□□□ -0.89
UBE3B-208ENST00000538070 RTKN2Q8IZC4 609 aa9.49□□□□□ -0.89
UBE3B-208ENST00000538070 C7orf43Q8WVR3 580 aa9.49□□□□□ -0.89
UBE3B-208ENST00000538070 WNK4Q96J92 1243 aa9.49□□□□□ -0.89
UBE3B-208ENST00000538070 HSD17B14Q9BPX1 270 aa9.49□□□□□ -0.89
UBE3B-208ENST00000538070 MYOZ2Q9NPC6 264 aa9.49□□□□□ -0.89
UBE3B-208ENST00000538070 PITPNM2Q9BZ72 1349 aa9.49□□□□□ -0.89
UBE3B-208ENST00000538070 ATMINO43313 823 aaPredicted RBP9.49□□□□□ -0.89
UBE3B-208ENST00000538070 ATP9AO75110 1047 aa9.49□□□□□ -0.89
UBE3B-208ENST00000538070 PSMD10O75832 226 aa9.49□□□□□ -0.89
UBE3B-208ENST00000538070 GLI1P08151 1106 aa9.49□□□□□ -0.89
UBE3B-208ENST00000538070 MYL7Q01449 175 aa9.49□□□□□ -0.89
UBE3B-208ENST00000538070 MAP2K1Q02750 393 aaPredicted RBP9.49□□□□□ -0.89
UBE3B-208ENST00000538070 ZSCAN26Q16670 478 aa9.49□□□□□ -0.89
UBE3B-208ENST00000538070 EDRF1Q3B7T1 1238 aa9.49□□□□□ -0.89
UBE3B-208ENST00000538070 HYIQ5T013 277 aa9.49□□□□□ -0.89
UBE3B-208ENST00000538070 NBPF12Q5TAG4 269 aaPredicted RBP9.49□□□□□ -0.89
UBE3B-208ENST00000538070 WDR78Q5VTH9 848 aa9.49□□□□□ -0.89
UBE3B-208ENST00000538070 TXLNBQ8N3L3 684 aa9.49□□□□□ -0.89
UBE3B-208ENST00000538070 GANQ9H2C0 597 aa9.49□□□□□ -0.89
UBE3B-208ENST00000538070 SCN9AQ15858 1988 aa9.49□□□□□ -0.89
UBE3B-208ENST00000538070 THSD7AQ9UPZ6 1657 aa9.48□□□□□ -0.89
UBE3B-208ENST00000538070 MAP2K7O14733 419 aa9.48□□□□□ -0.89
UBE3B-208ENST00000538070 TBX3O15119 743 aa9.48□□□□□ -0.89
UBE3B-208ENST00000538070 ATP8B1O43520 1251 aa9.48□□□□□ -0.89
UBE3B-208ENST00000538070 ZEB2O60315 1214 aa9.48□□□□□ -0.89
UBE3B-208ENST00000538070 CYP2C19P33261 490 aa9.48□□□□□ -0.89
UBE3B-208ENST00000538070 HMGCS2P54868 508 aa9.48□□□□□ -0.89
UBE3B-208ENST00000538070 SEMA3FQ13275 785 aa9.48□□□□□ -0.89
UBE3B-208ENST00000538070 SPDYE2Q495Y8 402 aa9.48□□□□□ -0.89
UBE3B-208ENST00000538070 STXBP4Q6ZWJ1 553 aa9.48□□□□□ -0.89
UBE3B-208ENST00000538070 C1orf186Q6ZWK4 172 aa9.48□□□□□ -0.89
UBE3B-208ENST00000538070 FRMD5Q7Z6J6 570 aa9.48□□□□□ -0.89
UBE3B-208ENST00000538070 SH2D3CQ8N5H7 860 aa9.48□□□□□ -0.89
UBE3B-208ENST00000538070 KAT5Q92993 513 aa9.48□□□□□ -0.89
UBE3B-208ENST00000538070 ATG4CQ96DT6 458 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms