RNA–Protein interactions for RNA: ENST00000537556.1

SRGAP1-202, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 2,976 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-202ENST00000537556 DCTN3O75935 186 aa9.19□□□□□ -0.94
SRGAP1-202ENST00000537556 PYGMP11217 842 aa9.19□□□□□ -0.94
SRGAP1-202ENST00000537556 CASP1P29466 404 aa9.19□□□□□ -0.94
SRGAP1-202ENST00000537556 TOB1P50616 345 aaPredicted RBP9.19□□□□□ -0.94
SRGAP1-202ENST00000537556 BCL2A1Q16548 175 aa9.19□□□□□ -0.94
SRGAP1-202ENST00000537556 MTHFSDQ2M296 383 aaKnown RBP9.19□□□□□ -0.94
SRGAP1-202ENST00000537556 HSP90AA5PQ58FG0 334 aa9.19□□□□□ -0.94
SRGAP1-202ENST00000537556 USP49Q70CQ1 688 aa9.19□□□□□ -0.94
SRGAP1-202ENST00000537556 CROCCP3Q8IVE0 287 aa9.19□□□□□ -0.94
SRGAP1-202ENST00000537556 ANKRD13CQ8N6S4 541 aa9.19□□□□□ -0.94
SRGAP1-202ENST00000537556 LRRC37BQ96QE4 947 aa9.19□□□□□ -0.94
SRGAP1-202ENST00000537556 HAUS7Q99871 368 aa9.19□□□□□ -0.94
SRGAP1-202ENST00000537556 FOXP1Q9H334 677 aaPredicted RBP9.19□□□□□ -0.94
SRGAP1-202ENST00000537556 STX18Q9P2W9 335 aaKnown RBP9.19□□□□□ -0.94
SRGAP1-202ENST00000537556 CNOT7Q9UIV1 285 aaKnown RBP9.19□□□□□ -0.94
SRGAP1-202ENST00000537556 RASAL2Q9UJF2 1139 aa9.19□□□□□ -0.94
SRGAP1-202ENST00000537556 HAO1Q9UJM8 370 aa9.19□□□□□ -0.94
SRGAP1-202ENST00000537556 MYH1P12882 1939 aa9.19□□□□□ -0.94
SRGAP1-202ENST00000537556 MYPNQ86TC9 1320 aa9.19□□□□□ -0.94
SRGAP1-202ENST00000537556 RIMS1Q86UR5 1692 aaKnown RBP9.19□□□□□ -0.94
SRGAP1-202ENST00000537556 KANSL1LA0AUZ9 987 aa9.18□□□□□ -0.94
SRGAP1-202ENST00000537556 MATN2O00339 956 aa9.18□□□□□ -0.94
SRGAP1-202ENST00000537556 STRNO43815 780 aa9.18□□□□□ -0.94
SRGAP1-202ENST00000537556 ZPR1O75312 459 aa9.18□□□□□ -0.94
SRGAP1-202ENST00000537556 ALDH2P05091 517 aa9.18□□□□□ -0.94
SRGAP1-202ENST00000537556 PDGFRBP09619 1106 aa9.18□□□□□ -0.94
SRGAP1-202ENST00000537556 EPHB2P29323 1055 aa9.18□□□□□ -0.94
SRGAP1-202ENST00000537556 GALK1P51570 392 aa9.18□□□□□ -0.94
SRGAP1-202ENST00000537556 CLCN2P51788 898 aa9.18□□□□□ -0.94
SRGAP1-202ENST00000537556 RAB15P59190 212 aa9.18□□□□□ -0.94
SRGAP1-202ENST00000537556 EHHADHQ08426 723 aa9.18□□□□□ -0.94
SRGAP1-202ENST00000537556 KHDC1Q4VXA5 237 aaKnown RBP9.18□□□□□ -0.94
SRGAP1-202ENST00000537556 C4orf50Q6ZRC1 276 aa9.18□□□□□ -0.94
SRGAP1-202ENST00000537556 TRIM67Q6ZTA4 783 aa9.18□□□□□ -0.94
SRGAP1-202ENST00000537556 ALDH16A1Q8IZ83 802 aa9.18□□□□□ -0.94
SRGAP1-202ENST00000537556 SCAIQ8N9R8 606 aa9.18□□□□□ -0.94
SRGAP1-202ENST00000537556 ACTRT1Q8TDG2 376 aa9.18□□□□□ -0.94
SRGAP1-202ENST00000537556 SEC14L1Q92503 715 aa9.18□□□□□ -0.94
SRGAP1-202ENST00000537556 CASP10Q92851 521 aa9.18□□□□□ -0.94
SRGAP1-202ENST00000537556 NMD3Q96D46 503 aaKnown RBP9.18□□□□□ -0.94
SRGAP1-202ENST00000537556 CGREF1Q99674 301 aa9.18□□□□□ -0.94
SRGAP1-202ENST00000537556 CUEDC2Q9H467 287 aa9.18□□□□□ -0.94
SRGAP1-202ENST00000537556 SALL4Q9UJQ4 1053 aa9.18□□□□□ -0.94
SRGAP1-202ENST00000537556 CTDP1Q9Y5B0 961 aaPredicted RBP9.18□□□□□ -0.94
SRGAP1-202ENST00000537556 SMIM23A6NLE4 172 aa9.18□□□□□ -0.94
SRGAP1-202ENST00000537556 PLEKP08567 350 aaPredicted RBP9.18□□□□□ -0.94
SRGAP1-202ENST00000537556 TARSP26639 723 aaKnown RBP9.18□□□□□ -0.94
SRGAP1-202ENST00000537556 HOXA10P31260 410 aaPredicted RBP9.18□□□□□ -0.94
SRGAP1-202ENST00000537556 POLGP54098 1239 aaPredicted RBP9.18□□□□□ -0.94
SRGAP1-202ENST00000537556 YARSP54577 528 aaKnown RBP9.18□□□□□ -0.94
SRGAP1-202ENST00000537556 IFI35P80217 286 aaPredicted RBP9.18□□□□□ -0.94
SRGAP1-202ENST00000537556 SPDYAQ5MJ70 313 aa9.18□□□□□ -0.94
SRGAP1-202ENST00000537556 PNPLA7Q6ZV29 1317 aa9.18□□□□□ -0.94
SRGAP1-202ENST00000537556 RSPH3Q86UC2 560 aa9.18□□□□□ -0.94
SRGAP1-202ENST00000537556 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.18□□□□□ -0.94
SRGAP1-202ENST00000537556 HELBQ8NG08 1087 aaPredicted RBP9.18□□□□□ -0.94
SRGAP1-202ENST00000537556 FNDC8Q8TC99 324 aa9.18□□□□□ -0.94
SRGAP1-202ENST00000537556 DDX12PQ92771 950 aa9.18□□□□□ -0.94
SRGAP1-202ENST00000537556 ERGIC2Q96RQ1 377 aa9.18□□□□□ -0.94
SRGAP1-202ENST00000537556 TMEM109Q9BVC6 243 aa9.18□□□□□ -0.94
SRGAP1-202ENST00000537556 SYNCQ9H7C4 482 aa9.18□□□□□ -0.94
SRGAP1-202ENST00000537556 TSC22D4Q9Y3Q8 395 aa9.18□□□□□ -0.94
SRGAP1-202ENST00000537556 SOS2Q07890 1332 aaPredicted RBP9.18□□□□□ -0.94
SRGAP1-202ENST00000537556 UMODL1Q5DID0 1318 aa9.18□□□□□ -0.94
SRGAP1-202ENST00000537556 BTBD18B2RXH4 712 aa9.18□□□□□ -0.94
SRGAP1-202ENST00000537556 PGRMC1O00264 195 aaKnown RBP9.18□□□□□ -0.94
SRGAP1-202ENST00000537556 HGSO14964 777 aaPredicted RBP9.18□□□□□ -0.94
SRGAP1-202ENST00000537556 FOXO3O43524 673 aa9.18□□□□□ -0.94
SRGAP1-202ENST00000537556 NDUFB5O43674 189 aa9.18□□□□□ -0.94
SRGAP1-202ENST00000537556 GTPBP6O43824 516 aaPredicted RBP9.18□□□□□ -0.94
SRGAP1-202ENST00000537556 OPHN1O60890 802 aa9.18□□□□□ -0.94
SRGAP1-202ENST00000537556 PTPN4P29074 926 aa9.18□□□□□ -0.94
SRGAP1-202ENST00000537556 ATP5DP30049 168 aa9.18□□□□□ -0.94
SRGAP1-202ENST00000537556 TXKP42681 527 aa9.18□□□□□ -0.94
SRGAP1-202ENST00000537556 USP11P51784 963 aa9.18□□□□□ -0.94
SRGAP1-202ENST00000537556 RPS6KA1Q15418 735 aa9.18□□□□□ -0.94
SRGAP1-202ENST00000537556 WDR72Q3MJ13 1102 aa9.18□□□□□ -0.94
SRGAP1-202ENST00000537556 LRRC8BQ6P9F7 803 aa9.18□□□□□ -0.94
SRGAP1-202ENST00000537556 POTEEQ6S8J3 1075 aa9.18□□□□□ -0.94
SRGAP1-202ENST00000537556 ECHDC2Q86YB7 292 aa9.18□□□□□ -0.94
SRGAP1-202ENST00000537556 DIS3L2Q8IYB7 885 aaKnown RBP9.18□□□□□ -0.94
SRGAP1-202ENST00000537556 CYP4X1Q8N118 509 aa9.18□□□□□ -0.94
SRGAP1-202ENST00000537556 PIP4K2CQ8TBX8 421 aa9.18□□□□□ -0.94
SRGAP1-202ENST00000537556 NRG4Q8WWG1 115 aa9.18□□□□□ -0.94
SRGAP1-202ENST00000537556 CKAP2Q8WWK9 683 aa9.18□□□□□ -0.94
SRGAP1-202ENST00000537556 ARHGEF2Q92974 986 aaKnown RBP9.18□□□□□ -0.94
SRGAP1-202ENST00000537556 ERP27Q96DN0 273 aa9.18□□□□□ -0.94
SRGAP1-202ENST00000537556 TRIM47Q96LD4 638 aa9.18□□□□□ -0.94
SRGAP1-202ENST00000537556 OSBPL10Q9BXB5 764 aa9.18□□□□□ -0.94
SRGAP1-202ENST00000537556 TXLNGYQ9BZA5 131 aa9.18□□□□□ -0.94
SRGAP1-202ENST00000537556 MYLK2Q9H1R3 596 aa9.18□□□□□ -0.94
SRGAP1-202ENST00000537556 TLE6Q9H808 572 aa9.18□□□□□ -0.94
SRGAP1-202ENST00000537556 USP40Q9NVE5 1235 aa9.18□□□□□ -0.94
SRGAP1-202ENST00000537556 STK32BQ9NY57 414 aa9.18□□□□□ -0.94
SRGAP1-202ENST00000537556 MYO5AQ9Y4I1 1855 aaKnown RBP9.17□□□□□ -0.94
SRGAP1-202ENST00000537556 SSU72P8A0A1W2PR75 194 aa9.17□□□□□ -0.94
SRGAP1-202ENST00000537556 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.17□□□□□ -0.94
SRGAP1-202ENST00000537556 BOLA2-SMG1P6H3BVE0 249 aa9.17□□□□□ -0.94
SRGAP1-202ENST00000537556 KCNK3O14649 394 aa9.17□□□□□ -0.94
SRGAP1-202ENST00000537556 FTCDO95954 541 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms