RNA–Protein interactions for RNA: ENST00000537408.1

CLSTN3-207, Transcript of calsyntenin 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-207ENST00000537408 DNM2P50570 870 aa11.75□□□□□ -0.53
CLSTN3-207ENST00000537408 USH1GQ495M9 461 aa11.75□□□□□ -0.53
CLSTN3-207ENST00000537408 LRRC24Q50LG9 513 aa11.75□□□□□ -0.53
CLSTN3-207ENST00000537408 TAOK1Q7L7X3 1001 aa11.75□□□□□ -0.53
CLSTN3-207ENST00000537408 VSIG1Q86XK7 387 aa11.75□□□□□ -0.53
CLSTN3-207ENST00000537408 MICALL2Q8IY33 904 aa11.75□□□□□ -0.53
CLSTN3-207ENST00000537408 GPC2Q8N158 579 aa11.75□□□□□ -0.53
CLSTN3-207ENST00000537408 ZNF579Q8NAF0 562 aaKnown RBP11.75□□□□□ -0.53
CLSTN3-207ENST00000537408 ASAP3Q8TDY4 903 aa11.75□□□□□ -0.53
CLSTN3-207ENST00000537408 LENG1Q96BZ8 264 aaPredicted RBP11.75□□□□□ -0.53
CLSTN3-207ENST00000537408 MAP3K14Q99558 947 aa11.75□□□□□ -0.53
CLSTN3-207ENST00000537408 CCDC113Q9H0I3 377 aa11.75□□□□□ -0.53
CLSTN3-207ENST00000537408 RNF41Q9H4P4 317 aaPredicted RBP11.75□□□□□ -0.53
CLSTN3-207ENST00000537408 IL1RAPL1Q9NZN1 696 aa11.75□□□□□ -0.53
CLSTN3-207ENST00000537408 RGS16O15492 202 aaPredicted RBP11.74□□□□□ -0.53
CLSTN3-207ENST00000537408 TOMM70O94826 608 aa11.74□□□□□ -0.53
CLSTN3-207ENST00000537408 IGKV5-2P06315 115 aa11.74□□□□□ -0.53
CLSTN3-207ENST00000537408 ALOX15P16050 662 aaPredicted RBP11.74□□□□□ -0.53
CLSTN3-207ENST00000537408 BPIFB4P59827 614 aa11.74□□□□□ -0.53
CLSTN3-207ENST00000537408 NELFBQ8WX92 580 aa11.74□□□□□ -0.53
CLSTN3-207ENST00000537408 MED15Q96RN5 788 aa11.74□□□□□ -0.53
CLSTN3-207ENST00000537408 COPRSQ9NQ92 184 aa11.74□□□□□ -0.53
CLSTN3-207ENST00000537408 EHD2Q9NZN4 543 aa11.74□□□□□ -0.53
CLSTN3-207ENST00000537408 ATP8A1Q9Y2Q0 1164 aa11.74□□□□□ -0.53
CLSTN3-207ENST00000537408 LGALS16A8MUM7 142 aa11.74□□□□□ -0.53
CLSTN3-207ENST00000537408 RNF225M0QZC1 329 aaPredicted RBP11.74□□□□□ -0.53
CLSTN3-207ENST00000537408 LGR5O75473 907 aa11.74□□□□□ -0.53
CLSTN3-207ENST00000537408 GMPSP49915 693 aaPredicted RBP11.74□□□□□ -0.53
CLSTN3-207ENST00000537408 CFAP157Q5JU67 520 aa11.74□□□□□ -0.53
CLSTN3-207ENST00000537408 WASHC2DQ5SRD0 308 aa11.74□□□□□ -0.53
CLSTN3-207ENST00000537408 GRAMD4Q6IC98 578 aa11.74□□□□□ -0.53
CLSTN3-207ENST00000537408 MAML3Q96JK9 1138 aa11.74□□□□□ -0.53
CLSTN3-207ENST00000537408 PBKQ96KB5 322 aa11.74□□□□□ -0.53
CLSTN3-207ENST00000537408 NAP1L3Q99457 506 aaPredicted RBP11.74□□□□□ -0.53
CLSTN3-207ENST00000537408 RXFP1Q9HBX9 757 aa11.74□□□□□ -0.53
CLSTN3-207ENST00000537408 SART1O43290 800 aaKnown RBP11.74□□□□□ -0.53
CLSTN3-207ENST00000537408 ATP9AO75110 1047 aa11.74□□□□□ -0.53
CLSTN3-207ENST00000537408 PTPREP23469 700 aa11.74□□□□□ -0.53
CLSTN3-207ENST00000537408 HOXA10P31260 410 aaPredicted RBP11.74□□□□□ -0.53
CLSTN3-207ENST00000537408 PTGER2P43116 358 aa11.74□□□□□ -0.53
CLSTN3-207ENST00000537408 MAGEA1P43355 309 aa11.74□□□□□ -0.53
CLSTN3-207ENST00000537408 MEA1Q16626 185 aa11.74□□□□□ -0.53
CLSTN3-207ENST00000537408 CNPY1Q3B7I2 92 aa11.74□□□□□ -0.53
CLSTN3-207ENST00000537408 ST13P4Q8IZP2 240 aaPredicted RBP11.74□□□□□ -0.53
CLSTN3-207ENST00000537408 PPP2R3CQ969Q6 453 aa11.74□□□□□ -0.53
CLSTN3-207ENST00000537408 ZNF317Q96PQ6 595 aaPredicted RBP11.74□□□□□ -0.53
CLSTN3-207ENST00000537408 GGT7Q9UJ14 662 aa11.74□□□□□ -0.53
CLSTN3-207ENST00000537408 PNMA2Q9UL42 364 aa11.74□□□□□ -0.53
CLSTN3-207ENST00000537408 MINPP1Q9UNW1 487 aa11.74□□□□□ -0.53
CLSTN3-207ENST00000537408 DUSP10Q9Y6W6 482 aa11.74□□□□□ -0.53
CLSTN3-207ENST00000537408 ZSCAN5CA6NGD5 496 aaPredicted RBP11.74□□□□□ -0.53
CLSTN3-207ENST00000537408 H0Y3Z8 333 aa11.74□□□□□ -0.53
CLSTN3-207ENST00000537408 PTDSS1P48651 473 aaKnown RBP11.74□□□□□ -0.53
CLSTN3-207ENST00000537408 GPSM2P81274 684 aa11.74□□□□□ -0.53
CLSTN3-207ENST00000537408 RILPL1Q5EBL4 403 aa11.74□□□□□ -0.53
CLSTN3-207ENST00000537408 CHADLQ6NUI6 762 aa11.74□□□□□ -0.53
CLSTN3-207ENST00000537408 TBC1D16Q8TBP0 767 aa11.74□□□□□ -0.53
CLSTN3-207ENST00000537408 SLC10A4Q96EP9 437 aa11.74□□□□□ -0.53
CLSTN3-207ENST00000537408 ZMAT2Q96NC0 199 aaKnown RBP11.74□□□□□ -0.53
CLSTN3-207ENST00000537408 GJB4Q9NTQ9 266 aa11.74□□□□□ -0.53
CLSTN3-207ENST00000537408 CAPN6Q9Y6Q1 641 aa11.74□□□□□ -0.53
CLSTN3-207ENST00000537408 LMO7Q8WWI1 1683 aa11.73□□□□□ -0.53
CLSTN3-207ENST00000537408 MARF1Q9Y4F3 1742 aaKnown RBP11.73□□□□□ -0.53
CLSTN3-207ENST00000537408 MAP3K13O43283 966 aa11.73□□□□□ -0.53
CLSTN3-207ENST00000537408 PDE8BO95263 885 aa11.73□□□□□ -0.53
CLSTN3-207ENST00000537408 IFNAR2P48551 515 aa11.73□□□□□ -0.53
CLSTN3-207ENST00000537408 INHBCP55103 352 aa11.73□□□□□ -0.53
CLSTN3-207ENST00000537408 TMEM62Q0P6H9 643 aa11.73□□□□□ -0.53
CLSTN3-207ENST00000537408 PARP6Q2NL67 630 aa11.73□□□□□ -0.53
CLSTN3-207ENST00000537408 TMEM110Q86TL2 294 aa11.73□□□□□ -0.53
CLSTN3-207ENST00000537408 MAGEB6Q8N7X4 407 aa11.73□□□□□ -0.53
CLSTN3-207ENST00000537408 ATP8B4Q8TF62 1192 aa11.73□□□□□ -0.53
CLSTN3-207ENST00000537408 GFM2Q969S9 779 aaKnown RBP11.73□□□□□ -0.53
CLSTN3-207ENST00000537408 PRMT1Q99873 361 aaKnown RBP11.73□□□□□ -0.53
CLSTN3-207ENST00000537408 TMED5Q9Y3A6 229 aa11.73□□□□□ -0.53
CLSTN3-207ENST00000537408 SLC4A4Q9Y6R1 1079 aa11.73□□□□□ -0.53
CLSTN3-207ENST00000537408 TLDC2A0PJX2 215 aa11.73□□□□□ -0.53
CLSTN3-207ENST00000537408 MAP3K7O43318 606 aa11.73□□□□□ -0.53
CLSTN3-207ENST00000537408 NCK2O43639 380 aa11.73□□□□□ -0.53
CLSTN3-207ENST00000537408 ACTN4O43707 911 aaKnown RBP11.73□□□□□ -0.53
CLSTN3-207ENST00000537408 SNX3O60493 162 aa11.73□□□□□ -0.53
CLSTN3-207ENST00000537408 ADCY1Q08828 1119 aa11.73□□□□□ -0.53
CLSTN3-207ENST00000537408 OLFML2BQ68BL8 750 aa11.73□□□□□ -0.53
CLSTN3-207ENST00000537408 SMYD4Q8IYR2 804 aaPredicted RBP11.73□□□□□ -0.53
CLSTN3-207ENST00000537408 SUCLA2Q9P2R7 463 aaPredicted RBP11.73□□□□□ -0.53
CLSTN3-207ENST00000537408 RCCD1A6NED2 376 aa11.73□□□□□ -0.53
CLSTN3-207ENST00000537408 POTEJP0CG39 1038 aa11.73□□□□□ -0.53
CLSTN3-207ENST00000537408 TPBGLP0DKB5 382 aa11.73□□□□□ -0.53
CLSTN3-207ENST00000537408 CD44P16070 742 aaKnown RBP11.73□□□□□ -0.53
CLSTN3-207ENST00000537408 EEF1GP26641 437 aaKnown RBP11.73□□□□□ -0.53
CLSTN3-207ENST00000537408 GYG1P46976 350 aa11.73□□□□□ -0.53
CLSTN3-207ENST00000537408 P3H1Q32P28 736 aa11.73□□□□□ -0.53
CLSTN3-207ENST00000537408 ZNF444Q8N0Y2 327 aaPredicted RBP11.73□□□□□ -0.53
CLSTN3-207ENST00000537408 MIGA1Q8NAN2 632 aa11.73□□□□□ -0.53
CLSTN3-207ENST00000537408 CORO1BQ9BR76 489 aa11.73□□□□□ -0.53
CLSTN3-207ENST00000537408 PUS3Q9BZE2 481 aaKnown RBP11.73□□□□□ -0.53
CLSTN3-207ENST00000537408 DCLRE1BQ9H816 532 aa11.73□□□□□ -0.53
CLSTN3-207ENST00000537408 TMEM98Q9Y2Y6 226 aa11.73□□□□□ -0.53
CLSTN3-207ENST00000537408 DLG5Q8TDM6 1919 aa11.73□□□□□ -0.53
CLSTN3-207ENST00000537408 PPP1R3GB7ZBB8 358 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms