RNA–Protein interactions for RNA: ENST00000537320.5

TNC-211, Transcript of tenascin C, humanhuman

TSL 5 BASIC

Gene TNC, Length 4,946 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-211ENST00000537320 HIP1RO75146 1068 aa12.29□□□□□ -0.44
TNC-211ENST00000537320 KRT1P04264 644 aa12.29□□□□□ -0.44
TNC-211ENST00000537320 PSMC4P43686 418 aa12.29□□□□□ -0.44
TNC-211ENST00000537320 PLTPP55058 493 aa12.29□□□□□ -0.44
TNC-211ENST00000537320 GNGT1P63211 74 aa12.29□□□□□ -0.44
TNC-211ENST00000537320 LMNB2Q03252 620 aa12.29□□□□□ -0.44
TNC-211ENST00000537320 FMR1Q06787 632 aaKnown RBP eCLIP12.29□□□□□ -0.44
TNC-211ENST00000537320 BAATQ14032 418 aaPredicted RBP12.29□□□□□ -0.44
TNC-211ENST00000537320 IQCB1Q15051 598 aa12.29□□□□□ -0.44
TNC-211ENST00000537320 ZNF668Q96K58 619 aaPredicted RBP12.29□□□□□ -0.44
TNC-211ENST00000537320 EIF3CQ99613 913 aaKnown RBP12.29□□□□□ -0.44
TNC-211ENST00000537320 PARD6BQ9BYG5 372 aa12.29□□□□□ -0.44
TNC-211ENST00000537320 ELP3Q9H9T3 547 aa12.29□□□□□ -0.44
TNC-211ENST00000537320 MED4Q9NPJ6 270 aa12.29□□□□□ -0.44
TNC-211ENST00000537320 VAMP7P51809 220 aa12.28□□□□□ -0.44
TNC-211ENST00000537320 GFPT1Q06210 699 aaPredicted RBP12.28□□□□□ -0.44
TNC-211ENST00000537320 DPYDQ12882 1025 aa12.28□□□□□ -0.44
TNC-211ENST00000537320 ZNF667Q5HYK9 610 aa12.28□□□□□ -0.44
TNC-211ENST00000537320 ADGRA1Q86SQ6 560 aa12.28□□□□□ -0.44
TNC-211ENST00000537320 VSIG1Q86XK7 387 aa12.28□□□□□ -0.44
TNC-211ENST00000537320 CCDC13Q8IYE1 715 aa12.28□□□□□ -0.44
TNC-211ENST00000537320 MMP19Q99542 508 aa12.28□□□□□ -0.44
TNC-211ENST00000537320 SH2D3AQ9BRG2 576 aa12.28□□□□□ -0.44
TNC-211ENST00000537320 MAD2L2Q9UI95 211 aa12.28□□□□□ -0.44
TNC-211ENST00000537320 ADGRB2O60241 1585 aa12.28□□□□□ -0.44
TNC-211ENST00000537320 PPFIA4O75335 1185 aa12.28□□□□□ -0.44
TNC-211ENST00000537320 GMPSP49915 693 aaPredicted RBP12.28□□□□□ -0.44
TNC-211ENST00000537320 ZNF280CQ8ND82 737 aa12.28□□□□□ -0.44
TNC-211ENST00000537320 SAAL1Q96ER3 474 aa12.28□□□□□ -0.44
TNC-211ENST00000537320 TEX13BQ9BXU2 312 aa12.28□□□□□ -0.44
TNC-211ENST00000537320 POLR3FQ9H1D9 316 aaPredicted RBP12.28□□□□□ -0.44
TNC-211ENST00000537320 MYOZ2Q9NPC6 264 aa12.28□□□□□ -0.44
TNC-211ENST00000537320 I3L4J1 428 aa12.28□□□□□ -0.44
TNC-211ENST00000537320 GMNNO75496 209 aa12.28□□□□□ -0.44
TNC-211ENST00000537320 CRCPO75575 148 aa12.28□□□□□ -0.44
TNC-211ENST00000537320 MYL3P08590 195 aa12.28□□□□□ -0.44
TNC-211ENST00000537320 NMT1P30419 496 aaKnown RBP12.28□□□□□ -0.44
TNC-211ENST00000537320 EPHB4P54760 987 aa12.28□□□□□ -0.44
TNC-211ENST00000537320 DYNLT1P63172 113 aa12.28□□□□□ -0.44
TNC-211ENST00000537320 NFIAQ12857 509 aa12.28□□□□□ -0.44
TNC-211ENST00000537320 ZNF568Q3ZCX4 644 aa12.28□□□□□ -0.44
TNC-211ENST00000537320 KCTD16Q68DU8 428 aa12.28□□□□□ -0.44
TNC-211ENST00000537320 RSRC2Q7L4I2 434 aaKnown RBP12.28□□□□□ -0.44
TNC-211ENST00000537320 TUFT1Q9NNX1 390 aa12.28□□□□□ -0.44
TNC-211ENST00000537320 SLC9A2Q9UBY0 812 aa12.28□□□□□ -0.44
TNC-211ENST00000537320 TRIM49P0CI25 452 aa12.28□□□□□ -0.44
TNC-211ENST00000537320 TRIM49CP0CI26 452 aa12.28□□□□□ -0.44
TNC-211ENST00000537320 SLC12A2P55011 1212 aa12.28□□□□□ -0.44
TNC-211ENST00000537320 RNASELQ05823 741 aaKnown RBP12.28□□□□□ -0.44
TNC-211ENST00000537320 CYFIP1Q7L576 1253 aa12.28□□□□□ -0.44
TNC-211ENST00000537320 HAUS6Q7Z4H7 955 aa12.28□□□□□ -0.44
TNC-211ENST00000537320 RHPN2Q8IUC4 686 aa12.28□□□□□ -0.44
TNC-211ENST00000537320 RHOT2Q8IXI1 618 aa12.28□□□□□ -0.44
TNC-211ENST00000537320 AP1M1Q9BXS5 423 aa12.28□□□□□ -0.44
TNC-211ENST00000537320 CALN1Q9BXU9 219 aa12.28□□□□□ -0.44
TNC-211ENST00000537320 GGA3Q9NZ52 723 aa12.28□□□□□ -0.44
TNC-211ENST00000537320 KDM4FA0A1W2PPD8 638 aa12.27□□□□□ -0.44
TNC-211ENST00000537320 LRRD1A4D1F6 860 aa12.27□□□□□ -0.44
TNC-211ENST00000537320 BUB1BO60566 1050 aaPredicted RBP12.27□□□□□ -0.44
TNC-211ENST00000537320 ECEL1O95672 775 aa12.27□□□□□ -0.44
TNC-211ENST00000537320 GRIN1Q05586 938 aa12.27□□□□□ -0.44
TNC-211ENST00000537320 SAMD7Q7Z3H4 446 aa12.27□□□□□ -0.44
TNC-211ENST00000537320 DEFB132Q7Z7B7 95 aa12.27□□□□□ -0.44
TNC-211ENST00000537320 METTL23Q86XA0 190 aa12.27□□□□□ -0.44
TNC-211ENST00000537320 MAD1L1Q9Y6D9 718 aa12.27□□□□□ -0.44
TNC-211ENST00000537320 PALMO75781 387 aa12.27□□□□□ -0.45
TNC-211ENST00000537320 MYCP01106 439 aaPredicted RBP12.27□□□□□ -0.45
TNC-211ENST00000537320 INPP5BP32019 993 aa12.27□□□□□ -0.45
TNC-211ENST00000537320 PHKA2P46019 1235 aa12.27□□□□□ -0.45
TNC-211ENST00000537320 HDLBPQ00341 1268 aaKnown RBP12.27□□□□□ -0.45
TNC-211ENST00000537320 APBA1Q02410 837 aa12.27□□□□□ -0.45
TNC-211ENST00000537320 PPP2R5CQ13362 524 aa12.27□□□□□ -0.45
TNC-211ENST00000537320 ADSSL1Q8N142 457 aa12.27□□□□□ -0.45
TNC-211ENST00000537320 SMC1BQ8NDV3 1235 aa12.27□□□□□ -0.45
TNC-211ENST00000537320 FAM71BQ8TC56 605 aa12.27□□□□□ -0.45
TNC-211ENST00000537320 SPATA33Q96N06 139 aa12.27□□□□□ -0.45
TNC-211ENST00000537320 LRRC4Q9HBW1 653 aa12.27□□□□□ -0.45
TNC-211ENST00000537320 TUBE1Q9UJT0 475 aa12.27□□□□□ -0.45
TNC-211ENST00000537320 USP27XA6NNY8 438 aa12.27□□□□□ -0.45
TNC-211ENST00000537320 SMARCA1P28370 1054 aa12.27□□□□□ -0.45
TNC-211ENST00000537320 YWHABP31946 246 aaKnown RBP12.27□□□□□ -0.45
TNC-211ENST00000537320 ITKQ08881 620 aa12.27□□□□□ -0.45
TNC-211ENST00000537320 JPH1Q9HDC5 661 aaPredicted RBP12.27□□□□□ -0.45
TNC-211ENST00000537320 CCDC151A5D8V7 595 aa12.27□□□□□ -0.45
TNC-211ENST00000537320 SRGNP10124 158 aa12.27□□□□□ -0.45
TNC-211ENST00000537320 HSPA6P17066 643 aa12.27□□□□□ -0.45
TNC-211ENST00000537320 STK4Q13043 487 aa12.27□□□□□ -0.45
TNC-211ENST00000537320 ERICH1Q86X53 443 aa12.27□□□□□ -0.45
TNC-211ENST00000537320 SLC16A10Q8TF71 515 aa12.27□□□□□ -0.45
TNC-211ENST00000537320 PRMT6Q96LA8 375 aaPredicted RBP12.27□□□□□ -0.45
TNC-211ENST00000537320 DEFB129Q9H1M3 183 aa12.27□□□□□ -0.45
TNC-211ENST00000537320 ATP8A1Q9Y2Q0 1164 aa12.27□□□□□ -0.45
TNC-211ENST00000537320 ADGRG1Q9Y653 693 aa12.27□□□□□ -0.45
TNC-211ENST00000537320 A0A1W2PQC6 194 aa12.26□□□□□ -0.45
TNC-211ENST00000537320 SLC7A5Q01650 507 aa12.26□□□□□ -0.45
TNC-211ENST00000537320 FASTKD5Q7L8L6 764 aaKnown RBP12.26□□□□□ -0.45
TNC-211ENST00000537320 RBM46Q8TBY0 533 aaKnown RBP12.26□□□□□ -0.45
TNC-211ENST00000537320 C7orf25Q9BPX7 421 aa12.26□□□□□ -0.45
TNC-211ENST00000537320 SLC38A10Q9HBR0 1119 aa12.26□□□□□ -0.45
TNC-211ENST00000537320 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms