RNA–Protein interactions for RNA: ENST00000535897.1

CHFR-211, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 4

Gene CHFR, Length 587 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-211ENST00000535897 EXOC6Q8TAG9 804 aa9.15□□□□□ -0.94
CHFR-211ENST00000535897 TMEM87BQ96K49 555 aa9.15□□□□□ -0.94
CHFR-211ENST00000535897 RIPOR3Q96MK2 946 aa9.15□□□□□ -0.94
CHFR-211ENST00000535897 ZNF558Q96NG5 402 aa9.15□□□□□ -0.94
CHFR-211ENST00000535897 ANO3Q9BYT9 981 aa9.15□□□□□ -0.94
CHFR-211ENST00000535897 ZNF302Q9NR11 478 aa9.15□□□□□ -0.94
CHFR-211ENST00000535897 LZTS1Q9Y250 596 aa9.15□□□□□ -0.94
CHFR-211ENST00000535897 COL1A2P08123 1366 aa9.14□□□□□ -0.95
CHFR-211ENST00000535897 EVPLQ92817 2033 aa9.14□□□□□ -0.95
CHFR-211ENST00000535897 FSCN2O14926 492 aa9.14□□□□□ -0.95
CHFR-211ENST00000535897 HOXA2O43364 376 aa9.14□□□□□ -0.95
CHFR-211ENST00000535897 CCNE2O96020 404 aa9.14□□□□□ -0.95
CHFR-211ENST00000535897 FOSP01100 380 aaPredicted RBP9.14□□□□□ -0.95
CHFR-211ENST00000535897 VTNP04004 478 aa9.14□□□□□ -0.95
CHFR-211ENST00000535897 ZSCAN20P17040 1043 aaPredicted RBP9.14□□□□□ -0.95
CHFR-211ENST00000535897 CRYBB1P53674 252 aaPredicted RBP9.14□□□□□ -0.95
CHFR-211ENST00000535897 TPRNQ4KMQ1 711 aa9.14□□□□□ -0.95
CHFR-211ENST00000535897 ZNF484Q5JVG2 852 aa9.14□□□□□ -0.95
CHFR-211ENST00000535897 WWC2Q6AWC2 1192 aa9.14□□□□□ -0.95
CHFR-211ENST00000535897 SWSAP1Q6NVH7 229 aa9.14□□□□□ -0.95
CHFR-211ENST00000535897 SYCE2Q6PIF2 218 aa9.14□□□□□ -0.95
CHFR-211ENST00000535897 KCNT2Q6UVM3 1135 aa9.14□□□□□ -0.95
CHFR-211ENST00000535897 TMEM184AQ6ZMB5 413 aa9.14□□□□□ -0.95
CHFR-211ENST00000535897 FAM43BQ6ZT52 329 aaPredicted RBP9.14□□□□□ -0.95
CHFR-211ENST00000535897 FAM228AQ86W67 206 aa9.14□□□□□ -0.95
CHFR-211ENST00000535897 CCDC60Q8IWA6 550 aaPredicted RBP9.14□□□□□ -0.95
CHFR-211ENST00000535897 UBALD2Q8IYN6 164 aa9.14□□□□□ -0.95
CHFR-211ENST00000535897 LRRC43Q8N309 656 aa9.14□□□□□ -0.95
CHFR-211ENST00000535897 CASP10Q92851 521 aa9.14□□□□□ -0.95
CHFR-211ENST00000535897 MAP4K1Q92918 833 aa9.14□□□□□ -0.95
CHFR-211ENST00000535897 SCLT1Q96NL6 688 aa9.14□□□□□ -0.95
CHFR-211ENST00000535897 MTA3Q9BTC8 594 aa9.14□□□□□ -0.95
CHFR-211ENST00000535897 LRRC2Q9BYS8 371 aa9.14□□□□□ -0.95
CHFR-211ENST00000535897 TMEM117Q9H0C3 514 aa9.14□□□□□ -0.95
CHFR-211ENST00000535897 S1PR5Q9H228 398 aa9.14□□□□□ -0.95
CHFR-211ENST00000535897 MFSD1Q9H3U5 465 aa9.14□□□□□ -0.95
CHFR-211ENST00000535897 CWH43Q9H720 699 aa9.14□□□□□ -0.95
CHFR-211ENST00000535897 NGRNQ9NPE2 291 aaKnown RBP9.14□□□□□ -0.95
CHFR-211ENST00000535897 CDH22Q9UJ99 828 aa9.14□□□□□ -0.95
CHFR-211ENST00000535897 SORCS3Q9UPU3 1222 aa9.14□□□□□ -0.95
CHFR-211ENST00000535897 AKT3Q9Y243 479 aa9.14□□□□□ -0.95
CHFR-211ENST00000535897 RIF1Q5UIP0 2472 aaKnown RBP9.14□□□□□ -0.95
CHFR-211ENST00000535897 PTPRZ1P23471 2315 aaPredicted RBP9.14□□□□□ -0.95
CHFR-211ENST00000535897 MYO15AQ9UKN7 3530 aa9.13□□□□□ -0.95
CHFR-211ENST00000535897 SPDYE4A6NLX3 237 aa9.13□□□□□ -0.95
CHFR-211ENST00000535897 MEIS1O00470 390 aa9.13□□□□□ -0.95
CHFR-211ENST00000535897 GALR2O43603 387 aaPredicted RBP9.13□□□□□ -0.95
CHFR-211ENST00000535897 ATG7O95352 703 aa9.13□□□□□ -0.95
CHFR-211ENST00000535897 BRD1O95696 1058 aa9.13□□□□□ -0.95
CHFR-211ENST00000535897 LIFRP42702 1097 aa9.13□□□□□ -0.95
CHFR-211ENST00000535897 NUBP1P53384 320 aa9.13□□□□□ -0.95
CHFR-211ENST00000535897 PLCB3Q01970 1234 aa9.13□□□□□ -0.95
CHFR-211ENST00000535897 SMC1AQ14683 1233 aaKnown RBP9.13□□□□□ -0.95
CHFR-211ENST00000535897 BMS1Q14692 1282 aaKnown RBP9.13□□□□□ -0.95
CHFR-211ENST00000535897 PPP1R18Q6NYC8 613 aa9.13□□□□□ -0.95
CHFR-211ENST00000535897 ABHD15Q6UXT9 468 aa9.13□□□□□ -0.95
CHFR-211ENST00000535897 PLA2G4DQ86XP0 818 aa9.13□□□□□ -0.95
CHFR-211ENST00000535897 TDRD5Q8NAT2 981 aaKnown RBP9.13□□□□□ -0.95
CHFR-211ENST00000535897 RASGRP4Q8TDF6 673 aa9.13□□□□□ -0.95
CHFR-211ENST00000535897 NECTIN4Q96NY8 510 aa9.13□□□□□ -0.95
CHFR-211ENST00000535897 MAP7D2Q96T17 732 aa9.13□□□□□ -0.95
CHFR-211ENST00000535897 POMKQ9H5K3 350 aa9.13□□□□□ -0.95
CHFR-211ENST00000535897 ELAC1Q9H777 363 aaKnown RBP9.13□□□□□ -0.95
CHFR-211ENST00000535897 RIC8AQ9NPQ8 531 aa9.13□□□□□ -0.95
CHFR-211ENST00000535897 SPG21Q9NZD8 308 aa9.13□□□□□ -0.95
CHFR-211ENST00000535897 MYH9P35579 1960 aaKnown RBP9.12□□□□□ -0.95
CHFR-211ENST00000535897 IGKV6D-21A0A0A0MT36 114 aa9.12□□□□□ -0.95
CHFR-211ENST00000535897 SMCO2A6NFE2 343 aa9.12□□□□□ -0.95
CHFR-211ENST00000535897 C2CD4DB7Z1M9 353 aa9.12□□□□□ -0.95
CHFR-211ENST00000535897 IPO5O00410 1097 aaKnown RBP9.12□□□□□ -0.95
CHFR-211ENST00000535897 C22orf31O95567 290 aa9.12□□□□□ -0.95
CHFR-211ENST00000535897 ASGR2P07307 311 aa9.12□□□□□ -0.95
CHFR-211ENST00000535897 WEE2P0C1S8 567 aa9.12□□□□□ -0.95
CHFR-211ENST00000535897 TMOD1P28289 359 aa9.12□□□□□ -0.95
CHFR-211ENST00000535897 SREBF1P36956 1147 aa9.12□□□□□ -0.95
CHFR-211ENST00000535897 METAP2P50579 478 aaKnown RBP eCLIP9.12□□□□□ -0.95
CHFR-211ENST00000535897 CLCN3P51790 818 aa9.12□□□□□ -0.95
CHFR-211ENST00000535897 NLRP11P59045 1033 aaKnown RBP9.12□□□□□ -0.95
CHFR-211ENST00000535897 ITIH3Q06033 890 aa9.12□□□□□ -0.95
CHFR-211ENST00000535897 AP3B2Q13367 1082 aa9.12□□□□□ -0.95
CHFR-211ENST00000535897 KCNC3Q14003 757 aa9.12□□□□□ -0.95
CHFR-211ENST00000535897 RARS2Q5T160 578 aaKnown RBP9.12□□□□□ -0.95
CHFR-211ENST00000535897 TYW1BQ6NUM6 668 aa9.12□□□□□ -0.95
CHFR-211ENST00000535897 LRRC55Q6ZSA7 311 aa9.12□□□□□ -0.95
CHFR-211ENST00000535897 ASCL5Q7RTU5 278 aa9.12□□□□□ -0.95
CHFR-211ENST00000535897 TMEM105Q8N8V8 129 aa9.12□□□□□ -0.95
CHFR-211ENST00000535897 BBXQ8WY36 941 aaPredicted RBP9.12□□□□□ -0.95
CHFR-211ENST00000535897 ZNF668Q96K58 619 aaPredicted RBP9.12□□□□□ -0.95
CHFR-211ENST00000535897 YTHDC1Q96MU7 727 aaKnown RBP9.12□□□□□ -0.95
CHFR-211ENST00000535897 CASD1Q96PB1 797 aa9.12□□□□□ -0.95
CHFR-211ENST00000535897 ZNF577Q9BSK1 485 aa9.12□□□□□ -0.95
CHFR-211ENST00000535897 ADAM7Q9H2U9 754 aa9.12□□□□□ -0.95
CHFR-211ENST00000535897 SMOC2Q9H3U7 446 aa9.12□□□□□ -0.95
CHFR-211ENST00000535897 RBM28Q9NW13 759 aaKnown RBP9.12□□□□□ -0.95
CHFR-211ENST00000535897 DBR1Q9UK59 544 aaKnown RBP9.12□□□□□ -0.95
CHFR-211ENST00000535897 NAP1L2Q9ULW6 460 aaPredicted RBP9.12□□□□□ -0.95
CHFR-211ENST00000535897 CEP131Q9UPN4 1083 aa9.12□□□□□ -0.95
CHFR-211ENST00000535897 SAMM50Q9Y512 469 aa9.12□□□□□ -0.95
CHFR-211ENST00000535897 HCFC2Q9Y5Z7 792 aa9.12□□□□□ -0.95
CHFR-211ENST00000535897 V9GY48 417 aaPredicted RBP9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms