RNA–Protein interactions for RNA: ENST00000535818.1

VPS37C-202, Transcript of VPS37C, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS37C, Length 865 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37C-202ENST00000535818 CD52P31358 61 aa24.83■■□□□ 1.57
VPS37C-202ENST00000535818 POLGP54098 1239 aaPredicted RBP24.83■■□□□ 1.57
VPS37C-202ENST00000535818 DEFB103AP81534 67 aa24.83■■□□□ 1.57
VPS37C-202ENST00000535818 PAK2Q13177 524 aa24.83■■□□□ 1.57
VPS37C-202ENST00000535818 KIZQ2M2Z5 673 aa24.83■■□□□ 1.57
VPS37C-202ENST00000535818 HAUS3Q68CZ6 603 aa24.83■■□□□ 1.57
VPS37C-202ENST00000535818 Q7L0L9 218 aa24.83■■□□□ 1.57
VPS37C-202ENST00000535818 SLC7A3Q8WY07 619 aa24.83■■□□□ 1.57
VPS37C-202ENST00000535818 CEP89Q96ST8 783 aa24.83■■□□□ 1.57
VPS37C-202ENST00000535818 LAMA3Q16787 3333 aa24.83■■□□□ 1.57
VPS37C-202ENST00000535818 MICAL3Q7RTP6 2002 aa24.83■■□□□ 1.56
VPS37C-202ENST00000535818 MAFO75444 373 aaPredicted RBP24.82■■□□□ 1.56
VPS37C-202ENST00000535818 FXR2P51116 673 aaKnown RBP eCLIP24.82■■□□□ 1.56
VPS37C-202ENST00000535818 CRYBB1P53674 252 aaPredicted RBP24.82■■□□□ 1.56
VPS37C-202ENST00000535818 HERC6Q8IVU3 1022 aa24.82■■□□□ 1.56
VPS37C-202ENST00000535818 EXOC8Q8IYI6 725 aa24.82■■□□□ 1.56
VPS37C-202ENST00000535818 MYOCDQ8IZQ8 938 aa24.82■■□□□ 1.56
VPS37C-202ENST00000535818 OSMRQ99650 979 aa24.82■■□□□ 1.56
VPS37C-202ENST00000535818 ZBED2Q9BTP6 218 aa24.82■■□□□ 1.56
VPS37C-202ENST00000535818 AGO3Q9H9G7 860 aaKnown RBP24.82■■□□□ 1.56
VPS37C-202ENST00000535818 TUFT1Q9NNX1 390 aa24.82■■□□□ 1.56
VPS37C-202ENST00000535818 LRWD1Q9UFC0 647 aa24.82■■□□□ 1.56
VPS37C-202ENST00000535818 GBF1Q92538 1859 aa24.81■■□□□ 1.56
VPS37C-202ENST00000535818 TMEM265A0A087WTH1 108 aa24.81■■□□□ 1.56
VPS37C-202ENST00000535818 LYPLA2O95372 231 aa24.81■■□□□ 1.56
VPS37C-202ENST00000535818 RFC5P40937 340 aa24.81■■□□□ 1.56
VPS37C-202ENST00000535818 PRPHP41219 470 aa24.81■■□□□ 1.56
VPS37C-202ENST00000535818 NLRP11P59045 1033 aaKnown RBP24.81■■□□□ 1.56
VPS37C-202ENST00000535818 DTHD1Q6ZMT9 781 aa24.81■■□□□ 1.56
VPS37C-202ENST00000535818 LIN28BQ6ZN17 250 aaKnown RBP eCLIP24.81■■□□□ 1.56
VPS37C-202ENST00000535818 ZNF710Q8N1W2 664 aa24.81■■□□□ 1.56
VPS37C-202ENST00000535818 FAM161BQ96MY7 647 aa24.81■■□□□ 1.56
VPS37C-202ENST00000535818 NKX2-4Q9H2Z4 354 aa24.81■■□□□ 1.56
VPS37C-202ENST00000535818 CDHR5Q9HBB8 845 aa24.81■■□□□ 1.56
VPS37C-202ENST00000535818 BMP2KQ9NSY1 1161 aaPredicted RBP24.81■■□□□ 1.56
VPS37C-202ENST00000535818 PCDHA11Q9Y5I1 949 aa24.81■■□□□ 1.56
VPS37C-202ENST00000535818 LOXHD1Q8IVV2 1947 aa24.8■■□□□ 1.56
VPS37C-202ENST00000535818 IGKV6-21A0A0C4DH24 114 aa24.8■■□□□ 1.56
VPS37C-202ENST00000535818 ZBTB39O15060 712 aa24.8■■□□□ 1.56
VPS37C-202ENST00000535818 GPR32O75388 356 aa24.8■■□□□ 1.56
VPS37C-202ENST00000535818 MED24O75448 989 aa24.8■■□□□ 1.56
VPS37C-202ENST00000535818 RPS6KA5O75582 802 aa24.8■■□□□ 1.56
VPS37C-202ENST00000535818 ATP2C1P98194 919 aaPredicted RBP24.8■■□□□ 1.56
VPS37C-202ENST00000535818 NFX1Q12986 1120 aaKnown RBP24.8■■□□□ 1.56
VPS37C-202ENST00000535818 DRP2Q13474 957 aa24.8■■□□□ 1.56
VPS37C-202ENST00000535818 ODR4Q5SWX8 454 aa24.8■■□□□ 1.56
VPS37C-202ENST00000535818 TMCO2Q7Z6W1 182 aaPredicted RBP24.8■■□□□ 1.56
VPS37C-202ENST00000535818 ZNF579Q8NAF0 562 aaKnown RBP24.8■■□□□ 1.56
VPS37C-202ENST00000535818 NLRP7Q8WX94 980 aa24.8■■□□□ 1.56
VPS37C-202ENST00000535818 ZNF668Q96K58 619 aaPredicted RBP24.8■■□□□ 1.56
VPS37C-202ENST00000535818 POLR3CQ9BUI4 534 aaPredicted RBP24.8■■□□□ 1.56
VPS37C-202ENST00000535818 ANKEF1Q9NU02 776 aa24.8■■□□□ 1.56
VPS37C-202ENST00000535818 PADI3Q9ULW8 664 aa24.8■■□□□ 1.56
VPS37C-202ENST00000535818 ARID2Q68CP9 1835 aa24.79■■□□□ 1.56
VPS37C-202ENST00000535818 PTPRSQ13332 1948 aa24.79■■□□□ 1.56
VPS37C-202ENST00000535818 STX6O43752 255 aa24.79■■□□□ 1.56
VPS37C-202ENST00000535818 TLL1O43897 1013 aa24.79■■□□□ 1.56
VPS37C-202ENST00000535818 SPATA31C1P0DKV0 1188 aa24.79■■□□□ 1.56
VPS37C-202ENST00000535818 GPC3P51654 580 aa24.79■■□□□ 1.56
VPS37C-202ENST00000535818 PDIA5Q14554 519 aa24.79■■□□□ 1.56
VPS37C-202ENST00000535818 FAM117BQ6P1L5 589 aa24.79■■□□□ 1.56
VPS37C-202ENST00000535818 CATSPER3Q86XQ3 398 aa24.79■■□□□ 1.56
VPS37C-202ENST00000535818 PIGOQ8TEQ8 1089 aa24.79■■□□□ 1.56
VPS37C-202ENST00000535818 TMEM40Q8WWA1 233 aa24.79■■□□□ 1.56
VPS37C-202ENST00000535818 FTHL17Q9BXU8 183 aa24.79■■□□□ 1.56
VPS37C-202ENST00000535818 SLC28A3Q9HAS3 691 aa24.79■■□□□ 1.56
VPS37C-202ENST00000535818 SUCLA2Q9P2R7 463 aaPredicted RBP24.79■■□□□ 1.56
VPS37C-202ENST00000535818 YBX2Q9Y2T7 364 aaKnown RBP24.79■■□□□ 1.56
VPS37C-202ENST00000535818 NOC2LQ9Y3T9 749 aaKnown RBP24.79■■□□□ 1.56
VPS37C-202ENST00000535818 STK24Q9Y6E0 443 aa24.79■■□□□ 1.56
VPS37C-202ENST00000535818 MYOGP15173 224 aa24.78■■□□□ 1.56
VPS37C-202ENST00000535818 RPA1P27694 616 aa24.78■■□□□ 1.56
VPS37C-202ENST00000535818 CCT6AP40227 531 aaKnown RBP24.78■■□□□ 1.56
VPS37C-202ENST00000535818 MKRN4PQ13434 485 aaPredicted RBP24.78■■□□□ 1.56
VPS37C-202ENST00000535818 EMC2Q15006 297 aa24.78■■□□□ 1.56
VPS37C-202ENST00000535818 RHPN2Q8IUC4 686 aa24.78■■□□□ 1.56
VPS37C-202ENST00000535818 SNX29Q8TEQ0 813 aa24.78■■□□□ 1.56
VPS37C-202ENST00000535818 MTRQ99707 1265 aa24.78■■□□□ 1.56
VPS37C-202ENST00000535818 DHX33Q9H6R0 707 aaKnown RBP24.78■■□□□ 1.56
VPS37C-202ENST00000535818 LOC101059915A0A1B0GWI6 518 aaPredicted RBP24.77■■□□□ 1.56
VPS37C-202ENST00000535818 GPR182O15218 404 aa24.77■■□□□ 1.56
VPS37C-202ENST00000535818 GAS2O43903 313 aaKnown RBP24.77■■□□□ 1.56
VPS37C-202ENST00000535818 BMP15O95972 392 aa24.77■■□□□ 1.56
VPS37C-202ENST00000535818 PDIA4P13667 645 aaKnown RBP24.77■■□□□ 1.56
VPS37C-202ENST00000535818 CDC42EP1Q00587 391 aa24.77■■□□□ 1.56
VPS37C-202ENST00000535818 RESTQ13127 1097 aa24.77■■□□□ 1.56
VPS37C-202ENST00000535818 PPP2R2DQ66LE6 453 aa24.77■■□□□ 1.56
VPS37C-202ENST00000535818 POTEGQ6S5H5 508 aa24.77■■□□□ 1.56
VPS37C-202ENST00000535818 IGSF22Q8N9C0 903 aa24.77■■□□□ 1.56
VPS37C-202ENST00000535818 TCP11Q8WWU5 503 aa24.77■■□□□ 1.56
VPS37C-202ENST00000535818 NACC1Q96RE7 527 aa24.77■■□□□ 1.56
VPS37C-202ENST00000535818 TTYH1Q9H313 450 aaPredicted RBP24.77■■□□□ 1.56
VPS37C-202ENST00000535818 ADAMTS10Q9H324 1103 aa24.77■■□□□ 1.56
VPS37C-202ENST00000535818 MTMR6Q9Y217 621 aa24.77■■□□□ 1.56
VPS37C-202ENST00000535818 A0A087WWV3 80 aa24.76■■□□□ 1.55
VPS37C-202ENST00000535818 UPP2O95045 317 aa24.76■■□□□ 1.55
VPS37C-202ENST00000535818 GJB5O95377 273 aa24.76■■□□□ 1.55
VPS37C-202ENST00000535818 XRCC6P12956 609 aaKnown RBP eCLIP24.76■■□□□ 1.55
VPS37C-202ENST00000535818 RARRES1P49788 294 aa24.76■■□□□ 1.55
VPS37C-202ENST00000535818 KRT79Q5XKE5 535 aa24.76■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms