RNA–Protein interactions for RNA: ENST00000533961.1

RDX-215, Transcript of radixin, human

TSL 2

Gene RDX, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RDX-215	ENST00000533961	KCNH7	Q9NS40	1196 aa		4.98	□□□□□ -1.61
RDX-215	ENST00000533961	CBLC	Q9ULV8	474 aa		4.98	□□□□□ -1.61
RDX-215	ENST00000533961	COQ6	Q9Y2Z9	468 aa		4.98	□□□□□ -1.61
RDX-215	ENST00000533961	ASB1	Q9Y576	335 aa		4.98	□□□□□ -1.61
RDX-215	ENST00000533961	TNPO3	Q9Y5L0	923 aa	Known RBP	4.98	□□□□□ -1.61
RDX-215	ENST00000533961	FAM90A27P	A6NNH2	459 aa		4.97	□□□□□ -1.61
RDX-215	ENST00000533961	RAMP2	O60895	175 aa		4.97	□□□□□ -1.61
RDX-215	ENST00000533961	DNAJC8	O75937	253 aa	Predicted RBP	4.97	□□□□□ -1.61
RDX-215	ENST00000533961	RAD17	O75943	681 aa		4.97	□□□□□ -1.61
RDX-215	ENST00000533961	C4BPA	P04003	597 aa	Known RBP	4.97	□□□□□ -1.61
RDX-215	ENST00000533961	ETV4	P43268	484 aa		4.97	□□□□□ -1.61
RDX-215	ENST00000533961	PABPC4	Q13310	644 aa	Known RBP eCLIP	4.97	□□□□□ -1.61
RDX-215	ENST00000533961		Q6ZSN1	163 aa		4.97	□□□□□ -1.61
RDX-215	ENST00000533961	PTRH1	Q86Y79	214 aa	Known RBP	4.97	□□□□□ -1.61
RDX-215	ENST00000533961	CISD2	Q8N5K1	135 aa	Known RBP	4.97	□□□□□ -1.61
RDX-215	ENST00000533961	STPG3	Q8N7X2	389 aa		4.97	□□□□□ -1.61
RDX-215	ENST00000533961	CALML6	Q8TD86	181 aa		4.97	□□□□□ -1.61
RDX-215	ENST00000533961	ZNF483	Q8TF39	744 aa	Predicted RBP	4.97	□□□□□ -1.61
RDX-215	ENST00000533961	NEIL1	Q96FI4	390 aa	Predicted RBP	4.97	□□□□□ -1.61
RDX-215	ENST00000533961	PRRX2	Q99811	253 aa		4.97	□□□□□ -1.61
RDX-215	ENST00000533961	SMURF1	Q9HCE7	757 aa		4.97	□□□□□ -1.61
RDX-215	ENST00000533961	TRIM39	Q9HCM9	518 aa		4.97	□□□□□ -1.61
RDX-215	ENST00000533961	TCRBV16S1A1N1	A0A5B0	115 aa		4.96	□□□□□ -1.62
RDX-215	ENST00000533961	SLC12A8	A0AV02	714 aa		4.96	□□□□□ -1.62
RDX-215	ENST00000533961	PMS2P1	A4D2B8	440 aa		4.96	□□□□□ -1.62
RDX-215	ENST00000533961	RFPL3	O75679	317 aa		4.96	□□□□□ -1.62
RDX-215	ENST00000533961	IL18BP	O95998	194 aa		4.96	□□□□□ -1.62
RDX-215	ENST00000533961	KRT15	P19012	456 aa		4.96	□□□□□ -1.62
RDX-215	ENST00000533961	CSF2RB	P32927	897 aa		4.96	□□□□□ -1.62
RDX-215	ENST00000533961	FLT3	P36888	993 aa		4.96	□□□□□ -1.62
RDX-215	ENST00000533961	IL12RB1	P42701	662 aa		4.96	□□□□□ -1.62
RDX-215	ENST00000533961	DNM2	P50570	870 aa		4.96	□□□□□ -1.62
RDX-215	ENST00000533961	JAM2	P57087	298 aa		4.96	□□□□□ -1.62
RDX-215	ENST00000533961	RAC3	P60763	192 aa		4.96	□□□□□ -1.62
RDX-215	ENST00000533961	TOP3A	Q13472	1001 aa	Predicted RBP	4.96	□□□□□ -1.62
RDX-215	ENST00000533961	CCDC142	Q17RM4	750 aa		4.96	□□□□□ -1.62
RDX-215	ENST00000533961	OTOP1	Q7RTM1	612 aa		4.96	□□□□□ -1.62
RDX-215	ENST00000533961	OVCH1	Q7RTY7	1134 aa		4.96	□□□□□ -1.62
RDX-215	ENST00000533961	DDX53	Q86TM3	631 aa	Known RBP	4.96	□□□□□ -1.62
RDX-215	ENST00000533961	HOMER1	Q86YM7	354 aa		4.96	□□□□□ -1.62
RDX-215	ENST00000533961	UBR7	Q8N806	425 aa		4.96	□□□□□ -1.62
RDX-215	ENST00000533961	APPBP2	Q92624	585 aa		4.96	□□□□□ -1.62
RDX-215	ENST00000533961	INTS7	Q9NVH2	962 aa	Known RBP	4.96	□□□□□ -1.62
RDX-215	ENST00000533961	RBPJL	Q9UBG7	517 aa		4.96	□□□□□ -1.62
RDX-215	ENST00000533961	TMA7	Q9Y2S6	64 aa	Known RBP	4.96	□□□□□ -1.62
RDX-215	ENST00000533961	B3GALT1	Q9Y5Z6	326 aa		4.96	□□□□□ -1.62
RDX-215	ENST00000533961	PRAMEF25	A6NGN4	478 aa		4.95	□□□□□ -1.62
RDX-215	ENST00000533961	ASL	P04424	464 aa		4.95	□□□□□ -1.62
RDX-215	ENST00000533961	FBL	P22087	321 aa	Known RBP	4.95	□□□□□ -1.62
RDX-215	ENST00000533961	ACRV1	P26436	265 aa		4.95	□□□□□ -1.62
RDX-215	ENST00000533961	IGFALS	P35858	605 aa		4.95	□□□□□ -1.62
RDX-215	ENST00000533961	GLRB	P48167	497 aa		4.95	□□□□□ -1.62
RDX-215	ENST00000533961	FNTB	P49356	437 aa		4.95	□□□□□ -1.62
RDX-215	ENST00000533961	MAP3K12	Q12852	859 aa		4.95	□□□□□ -1.62
RDX-215	ENST00000533961	EIF4H	Q15056	248 aa	Known RBP	4.95	□□□□□ -1.62
RDX-215	ENST00000533961	FNDC7	Q5VTL7	733 aa		4.95	□□□□□ -1.62
RDX-215	ENST00000533961	CC2D1A	Q6P1N0	951 aa	Predicted RBP	4.95	□□□□□ -1.62
RDX-215	ENST00000533961	CNNM4	Q6P4Q7	775 aa		4.95	□□□□□ -1.62
RDX-215	ENST00000533961	PCSK4	Q6UW60	755 aa		4.95	□□□□□ -1.62
RDX-215	ENST00000533961	MAMDC4	Q6UXC1	1216 aa		4.95	□□□□□ -1.62
RDX-215	ENST00000533961	C16orf86	Q6ZW13	317 aa		4.95	□□□□□ -1.62
RDX-215	ENST00000533961	NME9	Q86XW9	330 aa		4.95	□□□□□ -1.62
RDX-215	ENST00000533961	NOSTRIN	Q8IVI9	506 aa		4.95	□□□□□ -1.62
RDX-215	ENST00000533961	DLG3	Q92796	817 aa		4.95	□□□□□ -1.62
RDX-215	ENST00000533961	LPP	Q93052	612 aa		4.95	□□□□□ -1.62
RDX-215	ENST00000533961	TACO1	Q9BSH4	297 aa	Known RBP	4.95	□□□□□ -1.62
RDX-215	ENST00000533961	BOC	Q9BWV1	1114 aa		4.95	□□□□□ -1.62
RDX-215	ENST00000533961	ZDHHC5	Q9C0B5	715 aa		4.95	□□□□□ -1.62
RDX-215	ENST00000533961	BTBD7	Q9P203	1132 aa		4.95	□□□□□ -1.62
RDX-215	ENST00000533961	VWA7	Q9Y334	891 aa		4.95	□□□□□ -1.62
RDX-215	ENST00000533961	FAM83G	A6ND36	823 aa		4.94	□□□□□ -1.62
RDX-215	ENST00000533961	MAFG	O15525	162 aa		4.94	□□□□□ -1.62
RDX-215	ENST00000533961	KCNA6	P17658	529 aa		4.94	□□□□□ -1.62
RDX-215	ENST00000533961	ECE1	P42892	770 aa		4.94	□□□□□ -1.62
RDX-215	ENST00000533961	GYS2	P54840	703 aa		4.94	□□□□□ -1.62
RDX-215	ENST00000533961	SESN2	P58004	480 aa	Predicted RBP	4.94	□□□□□ -1.62
RDX-215	ENST00000533961	NFYC	Q13952	458 aa		4.94	□□□□□ -1.62
RDX-215	ENST00000533961	WDR72	Q3MJ13	1102 aa		4.94	□□□□□ -1.62
RDX-215	ENST00000533961	TM4SF20	Q53R12	229 aa		4.94	□□□□□ -1.62
RDX-215	ENST00000533961	PHF19	Q5T6S3	580 aa		4.94	□□□□□ -1.62
RDX-215	ENST00000533961	GPR155	Q7Z3F1	870 aa		4.94	□□□□□ -1.62
RDX-215	ENST00000533961	C2orf69	Q8N8R5	385 aa		4.94	□□□□□ -1.62
RDX-215	ENST00000533961	IGSF22	Q8N9C0	903 aa		4.94	□□□□□ -1.62
RDX-215	ENST00000533961	OR10A5	Q9H207	317 aa		4.94	□□□□□ -1.62
RDX-215	ENST00000533961	SLC39A2	Q9NP94	309 aa		4.94	□□□□□ -1.62
RDX-215	ENST00000533961	ACSS2	Q9NR19	701 aa		4.94	□□□□□ -1.62
RDX-215	ENST00000533961	AURKAIP1	Q9NWT8	199 aa	Predicted RBP	4.94	□□□□□ -1.62
RDX-215	ENST00000533961	SLC30A1	Q9Y6M5	507 aa		4.94	□□□□□ -1.62
RDX-215	ENST00000533961	FOXP2	O15409	715 aa		4.93	□□□□□ -1.62
RDX-215	ENST00000533961	OPA1	O60313	960 aa		4.93	□□□□□ -1.62
RDX-215	ENST00000533961	KPNA6	O60684	536 aa		4.93	□□□□□ -1.62
RDX-215	ENST00000533961	KRT37	O76014	449 aa		4.93	□□□□□ -1.62
RDX-215	ENST00000533961	CYP17A1	P05093	508 aa		4.93	□□□□□ -1.62
RDX-215	ENST00000533961	TMEM177	Q53S58	311 aa		4.93	□□□□□ -1.62
RDX-215	ENST00000533961	DALRD3	Q5D0E6	543 aa	Known RBP	4.93	□□□□□ -1.62
RDX-215	ENST00000533961	TMEM200B	Q69YZ2	307 aa		4.93	□□□□□ -1.62
RDX-215	ENST00000533961	ZCCHC8	Q6NZY4	707 aa	Known RBP	4.93	□□□□□ -1.62
RDX-215	ENST00000533961	ZNF627	Q7L945	461 aa		4.93	□□□□□ -1.62
RDX-215	ENST00000533961	ULK2	Q8IYT8	1036 aa		4.93	□□□□□ -1.62
RDX-215	ENST00000533961	FOXB1	Q99853	325 aa		4.93	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms