RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 ZNF484Q5JVG2 852 aa10.87□□□□□ -0.67
SSBP3-215ENST00000533946 MIER3Q7Z3K6 550 aa10.87□□□□□ -0.67
SSBP3-215ENST00000533946 BBXQ8WY36 941 aaPredicted RBP10.87□□□□□ -0.67
SSBP3-215ENST00000533946 ZNF689Q96CS4 500 aaPredicted RBP10.87□□□□□ -0.67
SSBP3-215ENST00000533946 TGS1Q96RS0 853 aaKnown RBP10.87□□□□□ -0.67
SSBP3-215ENST00000533946 YME1L1Q96TA2 773 aa10.87□□□□□ -0.67
SSBP3-215ENST00000533946 RIT2Q99578 217 aa10.87□□□□□ -0.67
SSBP3-215ENST00000533946 INSL6Q9Y581 213 aa10.87□□□□□ -0.67
SSBP3-215ENST00000533946 MRPL42Q9Y6G3 142 aaKnown RBP10.87□□□□□ -0.67
SSBP3-215ENST00000533946 NCOR1O75376 2440 aa10.86□□□□□ -0.67
SSBP3-215ENST00000533946 CCDC194A0A1B0GVG4 234 aa10.86□□□□□ -0.67
SSBP3-215ENST00000533946 MEIS3P2A8K0S8 358 aa10.86□□□□□ -0.67
SSBP3-215ENST00000533946 DDX11L8A8MPP1 907 aa10.86□□□□□ -0.67
SSBP3-215ENST00000533946 DGKIO75912 1065 aa10.86□□□□□ -0.67
SSBP3-215ENST00000533946 CTTNQ14247 550 aaKnown RBP10.86□□□□□ -0.67
SSBP3-215ENST00000533946 DSC3Q14574 896 aa10.86□□□□□ -0.67
SSBP3-215ENST00000533946 LONRF3Q496Y0 759 aa10.86□□□□□ -0.67
SSBP3-215ENST00000533946 IER5Q5VY09 327 aa10.86□□□□□ -0.67
SSBP3-215ENST00000533946 KRT25Q7Z3Z0 450 aa10.86□□□□□ -0.67
SSBP3-215ENST00000533946 NEK8Q86SG6 692 aa10.86□□□□□ -0.67
SSBP3-215ENST00000533946 TEX2Q8IWB9 1127 aa10.86□□□□□ -0.67
SSBP3-215ENST00000533946 TMEM192Q8IY95 271 aa10.86□□□□□ -0.67
SSBP3-215ENST00000533946 SMAP1Q8IYB5 467 aaPredicted RBP10.86□□□□□ -0.67
SSBP3-215ENST00000533946 DIS3L2Q8IYB7 885 aaKnown RBP10.86□□□□□ -0.67
SSBP3-215ENST00000533946 FBXO22Q8NEZ5 403 aa10.86□□□□□ -0.67
SSBP3-215ENST00000533946 KHSRPQ92945 711 aaKnown RBP eCLIP10.86□□□□□ -0.676e-7■■■□□ 16.7
SSBP3-215ENST00000533946 DYDC2Q96IM9 177 aa10.86□□□□□ -0.67
SSBP3-215ENST00000533946 ADAM2Q99965 735 aa10.86□□□□□ -0.67
SSBP3-215ENST00000533946 ALG13Q9NP73 1137 aaKnown RBP10.86□□□□□ -0.67
SSBP3-215ENST00000533946 SEPT9Q9UHD8 586 aaPredicted RBP10.86□□□□□ -0.67
SSBP3-215ENST00000533946 ARID2Q68CP9 1835 aa10.86□□□□□ -0.67
SSBP3-215ENST00000533946 KDM3AQ9Y4C1 1321 aa10.85□□□□□ -0.67
SSBP3-215ENST00000533946 MMP1P03956 469 aa10.85□□□□□ -0.67
SSBP3-215ENST00000533946 FGFR1P11362 822 aa10.85□□□□□ -0.67
SSBP3-215ENST00000533946 BMP1P13497 986 aa10.85□□□□□ -0.67
SSBP3-215ENST00000533946 IRS1P35568 1242 aa10.85□□□□□ -0.67
SSBP3-215ENST00000533946 KRT2P35908 639 aa10.85□□□□□ -0.67
SSBP3-215ENST00000533946 PBX3P40426 434 aa10.85□□□□□ -0.67
SSBP3-215ENST00000533946 SLC26A2P50443 739 aa10.85□□□□□ -0.67
SSBP3-215ENST00000533946 RBM10P98175 930 aaKnown RBP10.85□□□□□ -0.67
SSBP3-215ENST00000533946 CYP4A11Q02928 519 aa10.85□□□□□ -0.67
SSBP3-215ENST00000533946 PAK2Q13177 524 aa10.85□□□□□ -0.67
SSBP3-215ENST00000533946 GPM6BQ13491 265 aa10.85□□□□□ -0.67
SSBP3-215ENST00000533946 SKIV2LQ15477 1246 aaKnown RBP10.85□□□□□ -0.67
SSBP3-215ENST00000533946 CPLX2Q6PUV4 134 aaKnown RBP10.85□□□□□ -0.67
SSBP3-215ENST00000533946 LRRC55Q6ZSA7 311 aa10.85□□□□□ -0.67
SSBP3-215ENST00000533946 RSPH3Q86UC2 560 aa10.85□□□□□ -0.67
SSBP3-215ENST00000533946 ASB2Q96Q27 587 aa10.85□□□□□ -0.67
SSBP3-215ENST00000533946 C22orf23Q9BZE7 217 aa10.85□□□□□ -0.67
SSBP3-215ENST00000533946 TSPYL2Q9H2G4 693 aaPredicted RBP10.85□□□□□ -0.67
SSBP3-215ENST00000533946 MINDY3Q9H8M7 445 aa10.85□□□□□ -0.67
SSBP3-215ENST00000533946 POLD4Q9HCU8 107 aa10.85□□□□□ -0.67
SSBP3-215ENST00000533946 CD320Q9NPF0 282 aa10.85□□□□□ -0.67
SSBP3-215ENST00000533946 AKT3Q9Y243 479 aa10.85□□□□□ -0.67
SSBP3-215ENST00000533946 COL1A2P08123 1366 aa10.85□□□□□ -0.67
SSBP3-215ENST00000533946 RALGAPA2Q2PPJ7 1873 aa10.85□□□□□ -0.67
SSBP3-215ENST00000533946 IGKV6-21A0A0C4DH24 114 aa10.84□□□□□ -0.67
SSBP3-215ENST00000533946 C9IYK1 514 aa10.84□□□□□ -0.67
SSBP3-215ENST00000533946 LINC01565O15544 149 aa10.84□□□□□ -0.67
SSBP3-215ENST00000533946 B4GALT3O60512 393 aa10.84□□□□□ -0.67
SSBP3-215ENST00000533946 EFCAB14O75071 495 aa10.84□□□□□ -0.67
SSBP3-215ENST00000533946 RPS6KA5O75582 802 aa10.84□□□□□ -0.67
SSBP3-215ENST00000533946 CDKL5O76039 1030 aa10.84□□□□□ -0.67
SSBP3-215ENST00000533946 ATF7P17544 494 aaPredicted RBP10.84□□□□□ -0.67
SSBP3-215ENST00000533946 GPC3P51654 580 aa10.84□□□□□ -0.67
SSBP3-215ENST00000533946 CRYBB1P53674 252 aaPredicted RBP10.84□□□□□ -0.67
SSBP3-215ENST00000533946 DLX2Q07687 328 aaPredicted RBP10.84□□□□□ -0.67
SSBP3-215ENST00000533946 MCTP2Q6DN12 878 aa10.84□□□□□ -0.67
SSBP3-215ENST00000533946 NCAPH2Q6IBW4 605 aa10.84□□□□□ -0.67
SSBP3-215ENST00000533946 ADGRD2Q7Z7M1 963 aa10.84□□□□□ -0.67
SSBP3-215ENST00000533946 FEZF2Q8TBJ5 459 aa10.84□□□□□ -0.67
SSBP3-215ENST00000533946 APBB2Q92870 758 aa10.84□□□□□ -0.67
SSBP3-215ENST00000533946 TMEM143Q96AN5 459 aa10.84□□□□□ -0.67
SSBP3-215ENST00000533946 NIFKQ9BYG3 293 aaKnown RBP10.84□□□□□ -0.67
SSBP3-215ENST00000533946 THEGQ9P2T0 379 aa10.84□□□□□ -0.67
SSBP3-215ENST00000533946 LIMCH1Q9UPQ0 1083 aa10.84□□□□□ -0.67
SSBP3-215ENST00000533946 ADGRA3Q8IWK6 1321 aa10.84□□□□□ -0.67
SSBP3-215ENST00000533946 A0A087WZ62 844 aa10.83□□□□□ -0.68
SSBP3-215ENST00000533946 POTEMA6NI47 508 aa10.83□□□□□ -0.68
SSBP3-215ENST00000533946 H3BNC9 293 aa10.83□□□□□ -0.68
SSBP3-215ENST00000533946 SLITRK3O94933 977 aa10.83□□□□□ -0.68
SSBP3-215ENST00000533946 CTNNB1P35222 781 aa10.83□□□□□ -0.68
SSBP3-215ENST00000533946 TOB1P50616 345 aaPredicted RBP10.83□□□□□ -0.68
SSBP3-215ENST00000533946 AFF1P51825 1210 aaKnown RBP10.83□□□□□ -0.68
SSBP3-215ENST00000533946 JAK3P52333 1124 aa10.83□□□□□ -0.68
SSBP3-215ENST00000533946 PPP2R5CQ13362 524 aa10.83□□□□□ -0.68
SSBP3-215ENST00000533946 BTG3Q14201 252 aaPredicted RBP10.83□□□□□ -0.68
SSBP3-215ENST00000533946 ANKRD1Q15327 319 aa10.83□□□□□ -0.68
SSBP3-215ENST00000533946 ZNF174Q15697 407 aa10.83□□□□□ -0.68
SSBP3-215ENST00000533946 TCEAL5Q5H9L2 206 aa10.83□□□□□ -0.68
SSBP3-215ENST00000533946 PPP4R3AQ6IN85 833 aa10.83□□□□□ -0.68
SSBP3-215ENST00000533946 GALNT17Q6IS24 598 aa10.83□□□□□ -0.68
SSBP3-215ENST00000533946 MOXD1Q6UVY6 613 aa10.83□□□□□ -0.68
SSBP3-215ENST00000533946 NME8Q8N427 588 aa10.83□□□□□ -0.68
SSBP3-215ENST00000533946 FIBCD1Q8N539 461 aa10.83□□□□□ -0.68
SSBP3-215ENST00000533946 LPPQ93052 612 aa10.83□□□□□ -0.68
SSBP3-215ENST00000533946 MTMR9Q96QG7 549 aa10.83□□□□□ -0.68
SSBP3-215ENST00000533946 FDXACB1Q9BRP7 624 aaPredicted RBP10.83□□□□□ -0.68
SSBP3-215ENST00000533946 XPNPEP1Q9NQW7 623 aa10.83□□□□□ -0.68
SSBP3-215ENST00000533946 NRBP2Q9NSY0 501 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms