RNA–Protein interactions for RNA: ENST00000533870.1

SOX6-217, Transcript of SRY-box 6, humanhuman

TSL 5

Gene SOX6, Length 7,224 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-217ENST00000533870 ARFIP2P53365 341 aa4.35□□□□□ -1.71
SOX6-217ENST00000533870 MARSP56192 900 aaKnown RBP4.35□□□□□ -1.71
SOX6-217ENST00000533870 ZC3H6P61129 1189 aaKnown RBP4.35□□□□□ -1.71
SOX6-217ENST00000533870 NOP14P78316 857 aaKnown RBP4.35□□□□□ -1.71
SOX6-217ENST00000533870 GPC5P78333 572 aa4.35□□□□□ -1.71
SOX6-217ENST00000533870 MAPK7Q13164 816 aa4.35□□□□□ -1.71
SOX6-217ENST00000533870 GPBP1Q86WP2 473 aa4.35□□□□□ -1.71
SOX6-217ENST00000533870 PPP2R3CQ969Q6 453 aa4.35□□□□□ -1.71
SOX6-217ENST00000533870 CATSPER2Q96P56 530 aa4.35□□□□□ -1.71
SOX6-217ENST00000533870 DHX36Q9H2U1 1008 aaKnown RBP4.35□□□□□ -1.71
SOX6-217ENST00000533870 RABEP2Q9H5N1 569 aa4.35□□□□□ -1.71
SOX6-217ENST00000533870 DMAP1Q9NPF5 467 aaPredicted RBP4.35□□□□□ -1.71
SOX6-217ENST00000533870 PAPOLBQ9NRJ5 636 aaKnown RBP4.35□□□□□ -1.71
SOX6-217ENST00000533870 CCDC87Q9NVE4 849 aa4.35□□□□□ -1.71
SOX6-217ENST00000533870 TRAF3IP3Q9Y228 551 aa4.35□□□□□ -1.71
SOX6-217ENST00000533870 GTF3C5Q9Y5Q8 519 aaPredicted RBP4.35□□□□□ -1.71
SOX6-217ENST00000533870 USP17L12C9JPN9 530 aa4.35□□□□□ -1.71
SOX6-217ENST00000533870 USP17L21D6R901 530 aa4.35□□□□□ -1.71
SOX6-217ENST00000533870 F8VZ95 297 aa4.35□□□□□ -1.71
SOX6-217ENST00000533870 EIF3DO15371 548 aaKnown RBP eCLIP4.35□□□□□ -1.71
SOX6-217ENST00000533870 TXKP42681 527 aa4.35□□□□□ -1.71
SOX6-217ENST00000533870 ERVK-24P63145 666 aa4.35□□□□□ -1.71
SOX6-217ENST00000533870 IKQ13123 557 aaPredicted RBP4.35□□□□□ -1.71
SOX6-217ENST00000533870 TMEM259Q4ZIN3 620 aa4.35□□□□□ -1.71
SOX6-217ENST00000533870 ERMARDQ5T6L9 678 aa4.35□□□□□ -1.71
SOX6-217ENST00000533870 MEI1Q5TIA1 1274 aa4.35□□□□□ -1.71
SOX6-217ENST00000533870 TRIM59Q8IWR1 403 aa4.35□□□□□ -1.71
SOX6-217ENST00000533870 USHBP1Q8N6Y0 703 aa4.35□□□□□ -1.71
SOX6-217ENST00000533870 SMCR8Q8TEV9 937 aaPredicted RBP4.35□□□□□ -1.71
SOX6-217ENST00000533870 RAD54LQ92698 747 aa4.35□□□□□ -1.71
SOX6-217ENST00000533870 CNKSR1Q969H4 720 aa4.35□□□□□ -1.71
SOX6-217ENST00000533870 CMTM5Q96DZ9 223 aa4.35□□□□□ -1.71
SOX6-217ENST00000533870 WDR35Q9P2L0 1181 aa4.35□□□□□ -1.71
SOX6-217ENST00000533870 EPS15L1Q9UBC2 864 aa4.35□□□□□ -1.71
SOX6-217ENST00000533870 GDAQ9Y2T3 454 aa4.35□□□□□ -1.71
SOX6-217ENST00000533870 CAMSAP1Q5T5Y3 1602 aa4.35□□□□□ -1.71
SOX6-217ENST00000533870 INO80Q9ULG1 1556 aaPredicted RBP4.35□□□□□ -1.71
SOX6-217ENST00000533870 ARHGEF35A5YM69 484 aa4.34□□□□□ -1.71
SOX6-217ENST00000533870 PFDN1O60925 122 aa4.34□□□□□ -1.71
SOX6-217ENST00000533870 TCEA3O75764 348 aa4.34□□□□□ -1.71
SOX6-217ENST00000533870 PAPOLAP51003 745 aaKnown RBP4.34□□□□□ -1.71
SOX6-217ENST00000533870 RPS8P62241 208 aaKnown RBP4.34□□□□□ -1.71
SOX6-217ENST00000533870 E2F5Q15329 346 aa4.34□□□□□ -1.71
SOX6-217ENST00000533870 TBC1D9BQ66K14 1250 aa4.34□□□□□ -1.71
SOX6-217ENST00000533870 GSTA5Q7RTV2 222 aa4.34□□□□□ -1.71
SOX6-217ENST00000533870 MIER3Q7Z3K6 550 aa4.34□□□□□ -1.71
SOX6-217ENST00000533870 TBC1D10CQ8IV04 446 aa4.34□□□□□ -1.71
SOX6-217ENST00000533870 TMCO5AQ8N6Q1 288 aa4.34□□□□□ -1.71
SOX6-217ENST00000533870 PPP4R1Q8TF05 950 aa4.34□□□□□ -1.71
SOX6-217ENST00000533870 EPSTI1Q96J88 318 aa4.34□□□□□ -1.71
SOX6-217ENST00000533870 NAT9Q9BTE0 207 aa4.34□□□□□ -1.71
SOX6-217ENST00000533870 STK33Q9BYT3 514 aa4.34□□□□□ -1.71
SOX6-217ENST00000533870 LACRTQ9GZZ8 138 aa4.34□□□□□ -1.71
SOX6-217ENST00000533870 IL25Q9H293 177 aa4.34□□□□□ -1.71
SOX6-217ENST00000533870 STN1Q9H668 368 aaKnown RBP4.34□□□□□ -1.71
SOX6-217ENST00000533870 RNPEPL1Q9HAU8 725 aa4.34□□□□□ -1.71
SOX6-217ENST00000533870 C1orf112Q9NSG2 853 aa4.34□□□□□ -1.71
SOX6-217ENST00000533870 ZSWIM5Q9P217 1185 aa4.34□□□□□ -1.71
SOX6-217ENST00000533870 SUGT1Q9Y2Z0 365 aa4.34□□□□□ -1.71
SOX6-217ENST00000533870 SPECC1L-ADORA2AF8WAN1 911 aa4.34□□□□□ -1.71
SOX6-217ENST00000533870 AP3B1O00203 1094 aa4.34□□□□□ -1.71
SOX6-217ENST00000533870 TOMM70O94826 608 aa4.34□□□□□ -1.71
SOX6-217ENST00000533870 MT-ND3P03897 115 aa4.34□□□□□ -1.71
SOX6-217ENST00000533870 DNAJB2P25686 324 aa4.34□□□□□ -1.71
SOX6-217ENST00000533870 MMP13P45452 471 aa4.34□□□□□ -1.71
SOX6-217ENST00000533870 NR5A1Q13285 461 aa4.34□□□□□ -1.71
SOX6-217ENST00000533870 LRRC38Q5VT99 294 aa4.34□□□□□ -1.71
SOX6-217ENST00000533870 CIAPIN1Q6FI81 312 aa4.34□□□□□ -1.71
SOX6-217ENST00000533870 CREG2Q8IUH2 290 aa4.34□□□□□ -1.71
SOX6-217ENST00000533870 STKLD1Q8NE28 680 aa4.34□□□□□ -1.71
SOX6-217ENST00000533870 PIGOQ8TEQ8 1089 aa4.34□□□□□ -1.71
SOX6-217ENST00000533870 CHURC1Q8WUH1 139 aa4.34□□□□□ -1.71
SOX6-217ENST00000533870 ELAC2Q9BQ52 826 aaKnown RBP4.34□□□□□ -1.71
SOX6-217ENST00000533870 MAK16Q9BXY0 300 aaKnown RBP4.34□□□□□ -1.71
SOX6-217ENST00000533870 EIF2AQ9BY44 585 aaKnown RBP4.34□□□□□ -1.71
SOX6-217ENST00000533870 NUF2Q9BZD4 464 aa4.34□□□□□ -1.71
SOX6-217ENST00000533870 DPH5Q9H2P9 285 aa4.34□□□□□ -1.71
SOX6-217ENST00000533870 NRDE2Q9H7Z3 1164 aa4.34□□□□□ -1.71
SOX6-217ENST00000533870 VPS37BQ9H9H4 285 aa4.34□□□□□ -1.71
SOX6-217ENST00000533870 ANAPC5Q9UJX4 755 aa4.34□□□□□ -1.71
SOX6-217ENST00000533870 PCDHA12Q9UN75 941 aa4.34□□□□□ -1.71
SOX6-217ENST00000533870 SHOC2Q9UQ13 582 aa4.34□□□□□ -1.71
SOX6-217ENST00000533870 ARHGAP23Q9P227 1491 aa4.34□□□□□ -1.71
SOX6-217ENST00000533870 MST1RQ04912 1400 aa4.34□□□□□ -1.71
SOX6-217ENST00000533870 EXOC1LA0A1B0GW35 172 aa4.34□□□□□ -1.71
SOX6-217ENST00000533870 KLHL2O95198 593 aa4.34□□□□□ -1.71
SOX6-217ENST00000533870 ESRRBO95718 433 aa4.34□□□□□ -1.71
SOX6-217ENST00000533870 STMN1P16949 149 aa4.34□□□□□ -1.71
SOX6-217ENST00000533870 AP2B1P63010 937 aa4.34□□□□□ -1.71
SOX6-217ENST00000533870 CDK18Q07002 472 aa4.34□□□□□ -1.71
SOX6-217ENST00000533870 LCA5Q86VQ0 697 aa4.34□□□□□ -1.71
SOX6-217ENST00000533870 ANKRD13CQ8N6S4 541 aa4.34□□□□□ -1.71
SOX6-217ENST00000533870 KLHDC4Q8TBB5 520 aa4.34□□□□□ -1.71
SOX6-217ENST00000533870 ZNF507Q8TCN5 953 aa4.34□□□□□ -1.71
SOX6-217ENST00000533870 STK32AQ8WU08 396 aa4.34□□□□□ -1.71
SOX6-217ENST00000533870 TEKT4Q8WW24 435 aa4.34□□□□□ -1.71
SOX6-217ENST00000533870 ZNF653Q96CK0 615 aa4.34□□□□□ -1.71
SOX6-217ENST00000533870 EDC3Q96F86 508 aaKnown RBP4.34□□□□□ -1.71
SOX6-217ENST00000533870 KIFC3Q9BVG8 833 aa4.34□□□□□ -1.71
SOX6-217ENST00000533870 BLZF1Q9H2G9 400 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms