RNA–Protein interactions for RNA: ENST00000533752.1

TSKU-204, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

TSL 4

Gene TSKU, Length 643 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-204ENST00000533752 POTEMA6NI47 508 aa17.71■□□□□ 0.43
TSKU-204ENST00000533752 GAS2O43903 313 aaKnown RBP17.71■□□□□ 0.43
TSKU-204ENST00000533752 MAFO75444 373 aaPredicted RBP17.71■□□□□ 0.43
TSKU-204ENST00000533752 VTNP04004 478 aa17.71■□□□□ 0.43
TSKU-204ENST00000533752 CD52P31358 61 aa17.71■□□□□ 0.43
TSKU-204ENST00000533752 RFC5P40937 340 aa17.71■□□□□ 0.43
TSKU-204ENST00000533752 CTTNQ14247 550 aaKnown RBP17.71■□□□□ 0.43
TSKU-204ENST00000533752 KIZQ2M2Z5 673 aa17.71■□□□□ 0.43
TSKU-204ENST00000533752 PPP2R2DQ66LE6 453 aa17.71■□□□□ 0.43
TSKU-204ENST00000533752 HAUS3Q68CZ6 603 aa17.71■□□□□ 0.43
TSKU-204ENST00000533752 BRAPQ7Z569 592 aa17.71■□□□□ 0.43
TSKU-204ENST00000533752 HSCBQ8IWL3 235 aa17.71■□□□□ 0.43
TSKU-204ENST00000533752 MYOCDQ8IZQ8 938 aa17.71■□□□□ 0.43
TSKU-204ENST00000533752 CEP170P1Q96L14 293 aa17.71■□□□□ 0.43
TSKU-204ENST00000533752 CCDC43Q96MW1 224 aaKnown RBP17.71■□□□□ 0.43
TSKU-204ENST00000533752 CEP89Q96ST8 783 aa17.71■□□□□ 0.43
TSKU-204ENST00000533752 OSBPL7Q9BZF2 842 aa17.71■□□□□ 0.43
TSKU-204ENST00000533752 NKX2-4Q9H2Z4 354 aa17.71■□□□□ 0.43
TSKU-204ENST00000533752 AGO3Q9H9G7 860 aaKnown RBP17.71■□□□□ 0.43
TSKU-204ENST00000533752 STK24Q9Y6E0 443 aa17.71■□□□□ 0.43
TSKU-204ENST00000533752 TMEM150BA6NC51 233 aa17.7■□□□□ 0.42
TSKU-204ENST00000533752 GPR182O15218 404 aa17.7■□□□□ 0.42
TSKU-204ENST00000533752 GPR32O75388 356 aa17.7■□□□□ 0.42
TSKU-204ENST00000533752 RPS6KA5O75582 802 aa17.7■□□□□ 0.42
TSKU-204ENST00000533752 SLITRK3O94933 977 aa17.7■□□□□ 0.42
TSKU-204ENST00000533752 TOB1P50616 345 aaPredicted RBP17.7■□□□□ 0.42
TSKU-204ENST00000533752 FXR2P51116 673 aaKnown RBP eCLIP17.7■□□□□ 0.42
TSKU-204ENST00000533752 POLGP54098 1239 aaPredicted RBP17.7■□□□□ 0.42
TSKU-204ENST00000533752 PLA2G4FQ68DD2 849 aa17.7■□□□□ 0.42
TSKU-204ENST00000533752 FAM161BQ96MY7 647 aa17.7■□□□□ 0.42
TSKU-204ENST00000533752 SCLT1Q96NL6 688 aa17.7■□□□□ 0.42
TSKU-204ENST00000533752 RAD9AQ99638 391 aa17.7■□□□□ 0.42
TSKU-204ENST00000533752 TUFT1Q9NNX1 390 aa17.7■□□□□ 0.42
TSKU-204ENST00000533752 ANKEF1Q9NU02 776 aa17.7■□□□□ 0.42
TSKU-204ENST00000533752 WRAP73Q9P2S5 460 aaPredicted RBP17.7■□□□□ 0.42
TSKU-204ENST00000533752 PADI3Q9ULW8 664 aa17.7■□□□□ 0.42
TSKU-204ENST00000533752 PCDHB6Q9Y5E3 794 aa17.7■□□□□ 0.42
TSKU-204ENST00000533752 EVPLQ92817 2033 aa17.69■□□□□ 0.42
TSKU-204ENST00000533752 CA3P07451 260 aa17.69■□□□□ 0.42
TSKU-204ENST00000533752 PRPHP41219 470 aa17.69■□□□□ 0.42
TSKU-204ENST00000533752 TECP42680 631 aa17.69■□□□□ 0.42
TSKU-204ENST00000533752 GPC3P51654 580 aa17.69■□□□□ 0.42
TSKU-204ENST00000533752 NLRP11P59045 1033 aaKnown RBP17.69■□□□□ 0.42
TSKU-204ENST00000533752 PTGDRQ13258 359 aa17.69■□□□□ 0.42
TSKU-204ENST00000533752 NBR1Q14596 966 aa17.69■□□□□ 0.42
TSKU-204ENST00000533752 XKR9Q5GH70 373 aa17.69■□□□□ 0.42
TSKU-204ENST00000533752 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.69■□□□□ 0.42
TSKU-204ENST00000533752 GUCD1Q96NT3 240 aa17.69■□□□□ 0.42
TSKU-204ENST00000533752 OSMRQ99650 979 aa17.69■□□□□ 0.42
TSKU-204ENST00000533752 POLR3CQ9BUI4 534 aaPredicted RBP17.69■□□□□ 0.42
TSKU-204ENST00000533752 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.69■□□□□ 0.42
TSKU-204ENST00000533752 RNF216Q9NWF9 866 aaPredicted RBP17.69■□□□□ 0.42
TSKU-204ENST00000533752 STXBP5LQ9Y2K9 1186 aa17.69■□□□□ 0.42
TSKU-204ENST00000533752 INSL6Q9Y581 213 aa17.69■□□□□ 0.42
TSKU-204ENST00000533752 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.68■□□□□ 0.42
TSKU-204ENST00000533752 VPS37CA5D8V6 355 aaPredicted RBP17.68■□□□□ 0.42
TSKU-204ENST00000533752 XRCC6P12956 609 aaKnown RBP eCLIP17.68■□□□□ 0.42
TSKU-204ENST00000533752 MUTP22033 750 aa17.68■□□□□ 0.42
TSKU-204ENST00000533752 NPEPPSP55786 919 aa17.68■□□□□ 0.42
TSKU-204ENST00000533752 ZNF410Q86VK4 478 aa17.68■□□□□ 0.42
TSKU-204ENST00000533752 C4orf32Q8N8J7 132 aa17.68■□□□□ 0.42
TSKU-204ENST00000533752 TMEM40Q8WWA1 233 aa17.68■□□□□ 0.42
TSKU-204ENST00000533752 TCP11Q8WWU5 503 aa17.68■□□□□ 0.42
TSKU-204ENST00000533752 NLRP7Q8WX94 980 aa17.68■□□□□ 0.42
TSKU-204ENST00000533752 GBF1Q92538 1859 aa17.68■□□□□ 0.42
TSKU-204ENST00000533752 TOP1MTQ969P6 601 aa17.68■□□□□ 0.42
TSKU-204ENST00000533752 SH2D3AQ9BRG2 576 aa17.68■□□□□ 0.42
TSKU-204ENST00000533752 TSPYL2Q9H2G4 693 aaPredicted RBP17.68■□□□□ 0.42
TSKU-204ENST00000533752 ADAMTS10Q9H324 1103 aa17.68■□□□□ 0.42
TSKU-204ENST00000533752 DHX33Q9H6R0 707 aaKnown RBP17.68■□□□□ 0.42
TSKU-204ENST00000533752 ERVK-5Q9HDB9 667 aa17.68■□□□□ 0.42
TSKU-204ENST00000533752 PTPRSQ13332 1948 aa17.67■□□□□ 0.42
TSKU-204ENST00000533752 BMP15O95972 392 aa17.67■□□□□ 0.42
TSKU-204ENST00000533752 MYOGP15173 224 aa17.67■□□□□ 0.42
TSKU-204ENST00000533752 EIF4BP23588 611 aaKnown RBP17.67■□□□□ 0.42
TSKU-204ENST00000533752 RPA1P27694 616 aa17.67■□□□□ 0.42
TSKU-204ENST00000533752 NFX1Q12986 1120 aaKnown RBP17.67■□□□□ 0.42
TSKU-204ENST00000533752 PDIA5Q14554 519 aa17.67■□□□□ 0.42
TSKU-204ENST00000533752 EMC2Q15006 297 aa17.67■□□□□ 0.42
TSKU-204ENST00000533752 PSPC1Q8WXF1 523 aaKnown RBP17.67■□□□□ 0.42
TSKU-204ENST00000533752 PPP1R16BQ96T49 567 aa17.67■□□□□ 0.42
TSKU-204ENST00000533752 YME1L1Q96TA2 773 aa17.67■□□□□ 0.42
TSKU-204ENST00000533752 CDX2Q99626 313 aaPredicted RBP17.67■□□□□ 0.42
TSKU-204ENST00000533752 GCOM2Q9BZD3 368 aaPredicted RBP17.67■□□□□ 0.42
TSKU-204ENST00000533752 SUCLA2Q9P2R7 463 aaPredicted RBP17.67■□□□□ 0.42
TSKU-204ENST00000533752 ST3GAL5Q9UNP4 418 aa17.67■□□□□ 0.42
TSKU-204ENST00000533752 NOC2LQ9Y3T9 749 aaKnown RBP17.67■□□□□ 0.42
TSKU-204ENST00000533752 COL4A6Q14031 1691 aa17.67■□□□□ 0.42
TSKU-204ENST00000533752 ENPP3O14638 875 aa17.66■□□□□ 0.42
TSKU-204ENST00000533752 DGAT1O75907 488 aa17.66■□□□□ 0.42
TSKU-204ENST00000533752 DARSP14868 501 aaKnown RBP17.66■□□□□ 0.42
TSKU-204ENST00000533752 HTRA4P83105 476 aaPredicted RBP17.66■□□□□ 0.42
TSKU-204ENST00000533752 ATP2C1P98194 919 aaPredicted RBP17.66■□□□□ 0.42
TSKU-204ENST00000533752 DRP2Q13474 957 aa17.66■□□□□ 0.42
TSKU-204ENST00000533752 GRIN2CQ14957 1233 aa17.66■□□□□ 0.42
TSKU-204ENST00000533752 DTHD1Q6ZMT9 781 aa17.66■□□□□ 0.42
TSKU-204ENST00000533752 TMCO2Q7Z6W1 182 aaPredicted RBP17.66■□□□□ 0.42
TSKU-204ENST00000533752 FAM228AQ86W67 206 aa17.66■□□□□ 0.42
TSKU-204ENST00000533752 CATSPER3Q86XQ3 398 aa17.66■□□□□ 0.42
TSKU-204ENST00000533752 IGSF22Q8N9C0 903 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms