RNA–Protein interactions for RNA: ENST00000533727.5

AMBRA1-211, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene AMBRA1, Length 4,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-211ENST00000533727 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.17□□□□□ -0.465e-10■□□□□ 9.2
AMBRA1-211ENST00000533727 PCIF1Q9H4Z3 704 aa12.17□□□□□ -0.46
AMBRA1-211ENST00000533727 SLC38A10Q9HBR0 1119 aa12.17□□□□□ -0.46
AMBRA1-211ENST00000533727 ERAP1Q9NZ08 941 aa12.17□□□□□ -0.46
AMBRA1-211ENST00000533727 HBP1O60381 514 aa12.17□□□□□ -0.46
AMBRA1-211ENST00000533727 CIB2O75838 187 aa12.17□□□□□ -0.46
AMBRA1-211ENST00000533727 ERCC3P19447 782 aa12.17□□□□□ -0.46
AMBRA1-211ENST00000533727 SLC12A2P55011 1212 aa12.17□□□□□ -0.46
AMBRA1-211ENST00000533727 LMNB2Q03252 620 aa12.17□□□□□ -0.46
AMBRA1-211ENST00000533727 SOCS4Q8WXH5 440 aa12.17□□□□□ -0.46
AMBRA1-211ENST00000533727 RAB17Q9H0T7 212 aa12.17□□□□□ -0.46
AMBRA1-211ENST00000533727 VCX3BQ9H321 246 aa12.17□□□□□ -0.46
AMBRA1-211ENST00000533727 WDR70Q9NW82 654 aa12.17□□□□□ -0.46
AMBRA1-211ENST00000533727 EHD2Q9NZN4 543 aa12.17□□□□□ -0.46
AMBRA1-211ENST00000533727 MED1Q15648 1581 aaPredicted RBP12.17□□□□□ -0.46
AMBRA1-211ENST00000533727 EYA4O95677 639 aa12.16□□□□□ -0.46
AMBRA1-211ENST00000533727 SUPT20HL2P0C7V6 817 aa12.16□□□□□ -0.46
AMBRA1-211ENST00000533727 MAN1A1P33908 653 aa12.16□□□□□ -0.46
AMBRA1-211ENST00000533727 C10orf76Q5T2E6 689 aa12.16□□□□□ -0.46
AMBRA1-211ENST00000533727 NUDT18Q6ZVK8 323 aa12.16□□□□□ -0.46
AMBRA1-211ENST00000533727 ATG4CQ96DT6 458 aa12.16□□□□□ -0.46
AMBRA1-211ENST00000533727 PIDD1Q9HB75 910 aa12.16□□□□□ -0.46
AMBRA1-211ENST00000533727 AAASQ9NRG9 546 aa12.16□□□□□ -0.46
AMBRA1-211ENST00000533727 STRNO43815 780 aa12.16□□□□□ -0.46
AMBRA1-211ENST00000533727 PPFIA4O75335 1185 aa12.16□□□□□ -0.46
AMBRA1-211ENST00000533727 ARL4AP40617 200 aa12.16□□□□□ -0.46
AMBRA1-211ENST00000533727 OSTNP61366 133 aa12.16□□□□□ -0.46
AMBRA1-211ENST00000533727 SPATS2Q86XZ4 545 aaKnown RBP12.16□□□□□ -0.46
AMBRA1-211ENST00000533727 BBOF1Q8ND07 529 aa12.16□□□□□ -0.46
AMBRA1-211ENST00000533727 OR6B3Q8NGW1 331 aa12.16□□□□□ -0.46
AMBRA1-211ENST00000533727 SYNPO2Q9UMS6 1093 aa12.16□□□□□ -0.46
AMBRA1-211ENST00000533727 TTLL3Q9Y4R7 772 aa12.16□□□□□ -0.46
AMBRA1-211ENST00000533727 TBXAS1P24557 533 aaPredicted RBP12.16□□□□□ -0.46
AMBRA1-211ENST00000533727 PPATQ06203 517 aa12.16□□□□□ -0.46
AMBRA1-211ENST00000533727 CHADLQ6NUI6 762 aa12.16□□□□□ -0.46
AMBRA1-211ENST00000533727 RNF168Q8IYW5 571 aaPredicted RBP12.16□□□□□ -0.46
AMBRA1-211ENST00000533727 NDUFAF2Q8N183 169 aa12.16□□□□□ -0.46
AMBRA1-211ENST00000533727 PPP1R16BQ96T49 567 aa12.16□□□□□ -0.46
AMBRA1-211ENST00000533727 SLITRK6Q9H5Y7 841 aa12.16□□□□□ -0.46
AMBRA1-211ENST00000533727 STAG3L1P0CL83 205 aa12.16□□□□□ -0.46
AMBRA1-211ENST00000533727 PRAMEF18Q5VWM3 479 aa12.16□□□□□ -0.46
AMBRA1-211ENST00000533727 VSIG1Q86XK7 387 aa12.16□□□□□ -0.46
AMBRA1-211ENST00000533727 EFCAB13Q8IY85 973 aa12.16□□□□□ -0.46
AMBRA1-211ENST00000533727 CCDC105Q8IYK2 499 aa12.16□□□□□ -0.46
AMBRA1-211ENST00000533727 XPO4Q9C0E2 1151 aaKnown RBP12.16□□□□□ -0.46
AMBRA1-211ENST00000533727 HAUS4Q9H6D7 363 aa12.16□□□□□ -0.46
AMBRA1-211ENST00000533727 CLIC2O15247 247 aa12.15□□□□□ -0.46
AMBRA1-211ENST00000533727 ZNF827Q17R98 1081 aa12.15□□□□□ -0.46
AMBRA1-211ENST00000533727 MUM1L1Q5H9M0 696 aa12.15□□□□□ -0.46
AMBRA1-211ENST00000533727 GNASQ5JWF2 1037 aa12.15□□□□□ -0.46
AMBRA1-211ENST00000533727 ENOX1Q8TC92 643 aaKnown RBP12.15□□□□□ -0.46
AMBRA1-211ENST00000533727 PIGOQ8TEQ8 1089 aa12.15□□□□□ -0.46
AMBRA1-211ENST00000533727 GMCL1Q96IK5 515 aa12.15□□□□□ -0.46
AMBRA1-211ENST00000533727 EIF2AK1Q9BQI3 630 aaKnown RBP12.15□□□□□ -0.46
AMBRA1-211ENST00000533727 CPVLQ9H3G5 476 aa12.15□□□□□ -0.46
AMBRA1-211ENST00000533727 DISP2A7MBM2 1401 aa12.15□□□□□ -0.46
AMBRA1-211ENST00000533727 POTEB3A0JP26 581 aa12.15□□□□□ -0.46
AMBRA1-211ENST00000533727 CRCPO75575 148 aa12.15□□□□□ -0.46
AMBRA1-211ENST00000533727 YY1P25490 414 aa12.15□□□□□ -0.46
AMBRA1-211ENST00000533727 CACNB1Q02641 598 aaPredicted RBP12.15□□□□□ -0.46
AMBRA1-211ENST00000533727 BFSP2Q13515 415 aa12.15□□□□□ -0.46
AMBRA1-211ENST00000533727 DNAJC24Q6P3W2 148 aa12.15□□□□□ -0.46
AMBRA1-211ENST00000533727 POTEBQ6S5H4 581 aa12.15□□□□□ -0.46
AMBRA1-211ENST00000533727 GMCL1P1Q8NEA9 526 aa12.15□□□□□ -0.46
AMBRA1-211ENST00000533727 PAGE5Q96GU1 130 aa12.15□□□□□ -0.46
AMBRA1-211ENST00000533727 HEXIM2Q96MH2 286 aaKnown RBP12.15□□□□□ -0.46
AMBRA1-211ENST00000533727 ABCB4P21439 1286 aa12.15□□□□□ -0.46
AMBRA1-211ENST00000533727 LIG3P49916 1009 aa12.15□□□□□ -0.46
AMBRA1-211ENST00000533727 LRRC41Q15345 812 aa12.15□□□□□ -0.46
AMBRA1-211ENST00000533727 OPTNQ96CV9 577 aa12.15□□□□□ -0.46
AMBRA1-211ENST00000533727 MRFAP1L1Q96HT8 127 aa12.15□□□□□ -0.46
AMBRA1-211ENST00000533727 CALR3Q96L12 384 aaKnown RBP12.15□□□□□ -0.46
AMBRA1-211ENST00000533727 TTC1Q99614 292 aa12.15□□□□□ -0.46
AMBRA1-211ENST00000533727 TMX2Q9Y320 296 aa12.15□□□□□ -0.46
AMBRA1-211ENST00000533727 TYW1Q9NV66 732 aaKnown RBP12.14□□□□□ -0.47
AMBRA1-211ENST00000533727 SLC38A7Q9NVC3 462 aa12.14□□□□□ -0.47
AMBRA1-211ENST00000533727 GCNT4Q9P109 453 aa12.14□□□□□ -0.47
AMBRA1-211ENST00000533727 HOXA2O43364 376 aa12.14□□□□□ -0.47
AMBRA1-211ENST00000533727 PAK2Q13177 524 aa12.14□□□□□ -0.47
AMBRA1-211ENST00000533727 RESP18Q5W5W9 173 aa12.14□□□□□ -0.47
AMBRA1-211ENST00000533727 TTBK2Q6IQ55 1244 aa12.14□□□□□ -0.47
AMBRA1-211ENST00000533727 FAM163AQ96GL9 167 aaPredicted RBP12.14□□□□□ -0.47
AMBRA1-211ENST00000533727 AIFM3Q96NN9 605 aa12.14□□□□□ -0.47
AMBRA1-211ENST00000533727 IDI2Q9BXS1 227 aa12.14□□□□□ -0.47
AMBRA1-211ENST00000533727 RTFDC1Q9BY42 306 aaPredicted RBP12.14□□□□□ -0.47
AMBRA1-211ENST00000533727 EFCC1Q9HA90 598 aa12.14□□□□□ -0.47
AMBRA1-211ENST00000533727 TMEM260Q9NX78 707 aa12.14□□□□□ -0.47
AMBRA1-211ENST00000533727 DAAM1Q9Y4D1 1078 aa12.14□□□□□ -0.47
AMBRA1-211ENST00000533727 SCINQ9Y6U3 715 aa12.14□□□□□ -0.47
AMBRA1-211ENST00000533727 EFCAB8A8MWE9 144 aa12.14□□□□□ -0.47
AMBRA1-211ENST00000533727 SLC8A1P32418 973 aa12.14□□□□□ -0.47
AMBRA1-211ENST00000533727 OAZ1P54368 228 aa12.14□□□□□ -0.47
AMBRA1-211ENST00000533727 EXOSC10Q01780 885 aaKnown RBP12.14□□□□□ -0.47
AMBRA1-211ENST00000533727 PLCB4Q15147 1175 aa12.14□□□□□ -0.47
AMBRA1-211ENST00000533727 MAP1SQ66K74 1059 aaPredicted RBP12.14□□□□□ -0.47
AMBRA1-211ENST00000533727 BZW1Q7L1Q6 419 aaKnown RBP12.14□□□□□ -0.47
AMBRA1-211ENST00000533727 ENOSF1Q7L5Y1 443 aa12.14□□□□□ -0.47
AMBRA1-211ENST00000533727 NME8Q8N427 588 aa12.14□□□□□ -0.47
AMBRA1-211ENST00000533727 ANKRD13CQ8N6S4 541 aa12.14□□□□□ -0.47
AMBRA1-211ENST00000533727 KIAA1683Q9H0B3 1180 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms