RNA–Protein interactions for RNA: ENST00000533705.5

UBQLN1-206, Transcript of ubiquilin 1, humanhuman

TSL 1 (best)

Gene UBQLN1, Length 6,055 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1-206ENST00000533705 STK36Q9NRP7 1315 aa6.86□□□□□ -1.31
UBQLN1-206ENST00000533705 E9PMD0 336 aa6.86□□□□□ -1.31
UBQLN1-206ENST00000533705 DYNC1LI2O43237 492 aaPredicted RBP6.86□□□□□ -1.31
UBQLN1-206ENST00000533705 AKR1B1P15121 316 aa6.86□□□□□ -1.31
UBQLN1-206ENST00000533705 CDC25BP30305 580 aa6.86□□□□□ -1.31
UBQLN1-206ENST00000533705 PSMC5P62195 406 aa6.86□□□□□ -1.31
UBQLN1-206ENST00000533705 IL9RQ01113 521 aa6.86□□□□□ -1.31
UBQLN1-206ENST00000533705 STRIP1Q5VSL9 837 aa6.86□□□□□ -1.31
UBQLN1-206ENST00000533705 PRR5LQ6MZQ0 368 aa6.86□□□□□ -1.31
UBQLN1-206ENST00000533705 TOGARAM2Q6ZUX3 1019 aa6.86□□□□□ -1.31
UBQLN1-206ENST00000533705 CYB5R4Q7L1T6 521 aa6.86□□□□□ -1.31
UBQLN1-206ENST00000533705 TRIM42Q8IWZ5 723 aa6.86□□□□□ -1.31
UBQLN1-206ENST00000533705 YAF2Q8IY57 180 aa6.86□□□□□ -1.31
UBQLN1-206ENST00000533705 NEDD1Q8NHV4 660 aa6.86□□□□□ -1.31
UBQLN1-206ENST00000533705 PBKQ96KB5 322 aa6.86□□□□□ -1.31
UBQLN1-206ENST00000533705 NHEJ1Q9H9Q4 299 aaPredicted RBP6.86□□□□□ -1.31
UBQLN1-206ENST00000533705 OLA1Q9NTK5 396 aaKnown RBP6.86□□□□□ -1.31
UBQLN1-206ENST00000533705 ADAM22Q9P0K1 906 aa6.86□□□□□ -1.31
UBQLN1-206ENST00000533705 STK38LQ9Y2H1 464 aa6.86□□□□□ -1.31
UBQLN1-206ENST00000533705 IPO5O00410 1097 aaKnown RBP6.86□□□□□ -1.31
UBQLN1-206ENST00000533705 SART1O43290 800 aaKnown RBP6.86□□□□□ -1.31
UBQLN1-206ENST00000533705 TRIM28Q13263 835 aaKnown RBP6.86□□□□□ -1.31
UBQLN1-206ENST00000533705 SCARF1Q14162 830 aa6.86□□□□□ -1.31
UBQLN1-206ENST00000533705 ALX1Q15699 326 aa6.86□□□□□ -1.31
UBQLN1-206ENST00000533705 ALKBH5Q6P6C2 394 aaKnown RBP6.86□□□□□ -1.31
UBQLN1-206ENST00000533705 LDHDQ86WU2 507 aa6.86□□□□□ -1.31
UBQLN1-206ENST00000533705 SDCCAG3Q96C92 435 aa6.86□□□□□ -1.31
UBQLN1-206ENST00000533705 PARK7Q99497 189 aaKnown RBP6.86□□□□□ -1.31
UBQLN1-206ENST00000533705 MMTAG2Q9BU76 263 aaKnown RBP6.86□□□□□ -1.31
UBQLN1-206ENST00000533705 RASSF4Q9H2L5 321 aa6.86□□□□□ -1.31
UBQLN1-206ENST00000533705 RNF14Q9UBS8 474 aa6.86□□□□□ -1.31
UBQLN1-206ENST00000533705 HPCAL4Q9UM19 191 aa6.86□□□□□ -1.31
UBQLN1-206ENST00000533705 SHROOM2Q13796 1616 aa6.86□□□□□ -1.31
UBQLN1-206ENST00000533705 UPP2O95045 317 aa6.86□□□□□ -1.31
UBQLN1-206ENST00000533705 CELF2O95319 508 aaKnown RBP6.86□□□□□ -1.31
UBQLN1-206ENST00000533705 NR3C1P04150 777 aa6.86□□□□□ -1.31
UBQLN1-206ENST00000533705 ACCSLQ4AC99 568 aa6.86□□□□□ -1.31
UBQLN1-206ENST00000533705 CCDC38Q502W7 563 aa6.86□□□□□ -1.31
UBQLN1-206ENST00000533705 PHLDB3Q6NSJ2 640 aa6.86□□□□□ -1.31
UBQLN1-206ENST00000533705 KCNV1Q6PIU1 500 aa6.86□□□□□ -1.31
UBQLN1-206ENST00000533705 RHOT2Q8IXI1 618 aa6.86□□□□□ -1.31
UBQLN1-206ENST00000533705 CDC26Q8NHZ8 85 aa6.86□□□□□ -1.31
UBQLN1-206ENST00000533705 RBM46Q8TBY0 533 aaKnown RBP6.86□□□□□ -1.31
UBQLN1-206ENST00000533705 DNAJC12Q9UKB3 198 aa6.86□□□□□ -1.31
UBQLN1-206ENST00000533705 PLA2R1Q13018 1463 aa6.86□□□□□ -1.31
UBQLN1-206ENST00000533705 KIF28PB7ZC32 967 aa6.85□□□□□ -1.31
UBQLN1-206ENST00000533705 GCLMP48507 274 aa6.85□□□□□ -1.31
UBQLN1-206ENST00000533705 ORC2Q13416 577 aaPredicted RBP6.85□□□□□ -1.31
UBQLN1-206ENST00000533705 VEPH1Q14D04 833 aa6.85□□□□□ -1.31
UBQLN1-206ENST00000533705 TCP11X2Q5H9J9 407 aa6.85□□□□□ -1.31
UBQLN1-206ENST00000533705 SPOPLQ6IQ16 392 aa6.85□□□□□ -1.31
UBQLN1-206ENST00000533705 FAM117BQ6P1L5 589 aa6.85□□□□□ -1.31
UBQLN1-206ENST00000533705 CYFIP1Q7L576 1253 aa6.85□□□□□ -1.31
UBQLN1-206ENST00000533705 MRPL4Q9BYD3 311 aaKnown RBP6.85□□□□□ -1.31
UBQLN1-206ENST00000533705 POLR3FQ9H1D9 316 aaPredicted RBP6.85□□□□□ -1.31
UBQLN1-206ENST00000533705 EPB41L5Q9HCM4 733 aa6.85□□□□□ -1.31
UBQLN1-206ENST00000533705 FIS1Q9Y3D6 152 aa6.85□□□□□ -1.31
UBQLN1-206ENST00000533705 MOCS3O95396 460 aa6.85□□□□□ -1.31
UBQLN1-206ENST00000533705 DPEP1P16444 411 aa6.85□□□□□ -1.31
UBQLN1-206ENST00000533705 CYP27A1Q02318 531 aa6.85□□□□□ -1.31
UBQLN1-206ENST00000533705 BBS9Q3SYG4 887 aa6.85□□□□□ -1.31
UBQLN1-206ENST00000533705 RAD54LQ92698 747 aa6.85□□□□□ -1.31
UBQLN1-206ENST00000533705 N4BP2L2Q92802 583 aaPredicted RBP6.85□□□□□ -1.31
UBQLN1-206ENST00000533705 HVCN1Q96D96 273 aa6.85□□□□□ -1.31
UBQLN1-206ENST00000533705 PPP1R13BQ96KQ4 1090 aa6.85□□□□□ -1.31
UBQLN1-206ENST00000533705 SPTLC3Q9NUV7 552 aa6.85□□□□□ -1.31
UBQLN1-206ENST00000533705 ADAMTS1Q9UHI8 967 aa6.85□□□□□ -1.31
UBQLN1-206ENST00000533705 USH1CQ9Y6N9 552 aa6.85□□□□□ -1.31
UBQLN1-206ENST00000533705 WDR19Q8NEZ3 1342 aa6.85□□□□□ -1.31
UBQLN1-206ENST00000533705 POTEB3A0JP26 581 aa6.85□□□□□ -1.31
UBQLN1-206ENST00000533705 POTECB2RU33 542 aa6.85□□□□□ -1.31
UBQLN1-206ENST00000533705 NVLO15381 856 aaKnown RBP6.85□□□□□ -1.31
UBQLN1-206ENST00000533705 MT-ND3P03897 115 aa6.85□□□□□ -1.31
UBQLN1-206ENST00000533705 CTSHP09668 335 aa6.85□□□□□ -1.31
UBQLN1-206ENST00000533705 GMPSP49915 693 aaPredicted RBP6.85□□□□□ -1.31
UBQLN1-206ENST00000533705 RWDD2BP57060 319 aa6.85□□□□□ -1.31
UBQLN1-206ENST00000533705 CC2D1AQ6P1N0 951 aaPredicted RBP6.85□□□□□ -1.31
UBQLN1-206ENST00000533705 POTEBQ6S5H4 581 aa6.85□□□□□ -1.31
UBQLN1-206ENST00000533705 PREX2Q70Z35 1606 aa6.85□□□□□ -1.31
UBQLN1-206ENST00000533705 PDIK1LQ8N165 341 aa6.85□□□□□ -1.31
UBQLN1-206ENST00000533705 CFAP61Q8NHU2 1237 aa6.85□□□□□ -1.31
UBQLN1-206ENST00000533705 RNF217Q8TC41 542 aa6.85□□□□□ -1.31
UBQLN1-206ENST00000533705 VPS39Q96JC1 886 aa6.85□□□□□ -1.31
UBQLN1-206ENST00000533705 BARHL2Q9NY43 387 aa6.85□□□□□ -1.31
UBQLN1-206ENST00000533705 BAIAP2L1Q9UHR4 511 aa6.85□□□□□ -1.31
UBQLN1-206ENST00000533705 SCAF8Q9UPN6 1271 aaKnown RBP6.85□□□□□ -1.31
UBQLN1-206ENST00000533705 FARP1Q9Y4F1 1045 aaPredicted RBP6.85□□□□□ -1.31
UBQLN1-206ENST00000533705 GSG1L2A8MUP6 293 aa6.85□□□□□ -1.31
UBQLN1-206ENST00000533705 NBPF26B4DH59 902 aa6.85□□□□□ -1.31
UBQLN1-206ENST00000533705 COG7P83436 770 aa6.85□□□□□ -1.31
UBQLN1-206ENST00000533705 TRIP13Q15645 432 aaPredicted RBP6.85□□□□□ -1.31
UBQLN1-206ENST00000533705 NBPF10Q6P3W6 841 aaKnown RBP6.85□□□□□ -1.31
UBQLN1-206ENST00000533705 TMEM270Q6UE05 265 aa6.85□□□□□ -1.31
UBQLN1-206ENST00000533705 NBPF15Q8N660 670 aa6.85□□□□□ -1.31
UBQLN1-206ENST00000533705 ACRBPQ8NEB7 543 aa6.85□□□□□ -1.31
UBQLN1-206ENST00000533705 MIPOL1Q8TD10 442 aa6.85□□□□□ -1.31
UBQLN1-206ENST00000533705 DHX38Q92620 1227 aaKnown RBP6.85□□□□□ -1.31
UBQLN1-206ENST00000533705 LRGUKQ96M69 825 aa6.85□□□□□ -1.31
UBQLN1-206ENST00000533705 SUDS3Q9H7L9 328 aaPredicted RBP6.85□□□□□ -1.31
UBQLN1-206ENST00000533705 INTS9Q9NV88 658 aaKnown RBP6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms