RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 DENND3A2RUS2 1198 aa11.75□□□□□ -0.53
CAPN1-225ENST00000533704 TMEM150BA6NC51 233 aa11.75□□□□□ -0.53
CAPN1-225ENST00000533704 DDX11L8A8MPP1 907 aa11.75□□□□□ -0.53
CAPN1-225ENST00000533704 FDPSP14324 419 aaKnown RBP11.75□□□□□ -0.53
CAPN1-225ENST00000533704 TMOD1P28289 359 aa11.75□□□□□ -0.53
CAPN1-225ENST00000533704 NLRP11P59045 1033 aaKnown RBP11.75□□□□□ -0.53
CAPN1-225ENST00000533704 TBC1D8BQ0IIM8 1120 aa11.75□□□□□ -0.53
CAPN1-225ENST00000533704 NR5A1Q13285 461 aa11.75□□□□□ -0.53
CAPN1-225ENST00000533704 MOXD1Q6UVY6 613 aa11.75□□□□□ -0.53
CAPN1-225ENST00000533704 NSUN7Q8NE18 718 aaKnown RBP11.75□□□□□ -0.53
CAPN1-225ENST00000533704 RDM1Q8NG50 284 aa11.75□□□□□ -0.53
CAPN1-225ENST00000533704 TMEM40Q8WWA1 233 aa11.75□□□□□ -0.53
CAPN1-225ENST00000533704 MBOAT7Q96N66 472 aa11.75□□□□□ -0.53
CAPN1-225ENST00000533704 SH2D3AQ9BRG2 576 aa11.75□□□□□ -0.53
CAPN1-225ENST00000533704 TMX1Q9H3N1 280 aa11.75□□□□□ -0.53
CAPN1-225ENST00000533704 ERVK-5Q9HDB9 667 aa11.75□□□□□ -0.53
CAPN1-225ENST00000533704 ST3GAL5Q9UNP4 418 aa11.75□□□□□ -0.53
CAPN1-225ENST00000533704 COL4A6Q14031 1691 aa11.75□□□□□ -0.53
CAPN1-225ENST00000533704 GPR182O15218 404 aa11.74□□□□□ -0.53
CAPN1-225ENST00000533704 MGEA5O60502 916 aa11.74□□□□□ -0.53
CAPN1-225ENST00000533704 DGKIO75912 1065 aa11.74□□□□□ -0.53
CAPN1-225ENST00000533704 STAG3L1P0CL83 205 aa11.74□□□□□ -0.53
CAPN1-225ENST00000533704 GCFC2P16383 781 aaKnown RBP11.74□□□□□ -0.53
CAPN1-225ENST00000533704 GATMP50440 423 aa11.74□□□□□ -0.53
CAPN1-225ENST00000533704 KCNQ1P51787 676 aa11.74□□□□□ -0.53
CAPN1-225ENST00000533704 CRYBB1P53674 252 aaPredicted RBP11.74□□□□□ -0.53
CAPN1-225ENST00000533704 PTPROQ16827 1216 aa11.74□□□□□ -0.53
CAPN1-225ENST00000533704 AAK1Q2M2I8 961 aa11.74□□□□□ -0.53
CAPN1-225ENST00000533704 EARS2Q5JPH6 523 aaKnown RBP11.74□□□□□ -0.53
CAPN1-225ENST00000533704 ODR4Q5SWX8 454 aa11.74□□□□□ -0.53
CAPN1-225ENST00000533704 NPAS4Q8IUM7 802 aa11.74□□□□□ -0.53
CAPN1-225ENST00000533704 CCDC83Q8IWF9 413 aa11.74□□□□□ -0.53
CAPN1-225ENST00000533704 ADAMTS19Q8TE59 1207 aa11.74□□□□□ -0.53
CAPN1-225ENST00000533704 HLA-CQ95604 372 aa11.74□□□□□ -0.53
CAPN1-225ENST00000533704 MRPL38Q96DV4 380 aaKnown RBP11.74□□□□□ -0.53
CAPN1-225ENST00000533704 NAP1L4Q99733 375 aaKnown RBP11.74□□□□□ -0.53
CAPN1-225ENST00000533704 ADAM2Q99965 735 aa11.74□□□□□ -0.53
CAPN1-225ENST00000533704 LMCD1Q9NZU5 365 aa11.74□□□□□ -0.53
CAPN1-225ENST00000533704 PLXNA4Q9HCM2 1894 aa11.74□□□□□ -0.53
CAPN1-225ENST00000533704 H3BNC9 293 aa11.73□□□□□ -0.53
CAPN1-225ENST00000533704 EML1O00423 815 aa11.73□□□□□ -0.53
CAPN1-225ENST00000533704 GPR32O75388 356 aa11.73□□□□□ -0.53
CAPN1-225ENST00000533704 GUCY1B3Q02153 619 aa11.73□□□□□ -0.53
CAPN1-225ENST00000533704 XKR3Q5GH77 459 aa11.73□□□□□ -0.53
CAPN1-225ENST00000533704 SPOUT1Q5T280 376 aaKnown RBP11.73□□□□□ -0.53
CAPN1-225ENST00000533704 NCAPH2Q6IBW4 605 aa11.73□□□□□ -0.53
CAPN1-225ENST00000533704 PPP4R3AQ6IN85 833 aa11.73□□□□□ -0.53
CAPN1-225ENST00000533704 EP400NLQ6ZTU2 488 aa11.73□□□□□ -0.53
CAPN1-225ENST00000533704 FAM228AQ86W67 206 aa11.73□□□□□ -0.53
CAPN1-225ENST00000533704 DIS3L2Q8IYB7 885 aaKnown RBP11.73□□□□□ -0.53
CAPN1-225ENST00000533704 NLRP7Q8WX94 980 aa11.73□□□□□ -0.53
CAPN1-225ENST00000533704 COG5Q9UP83 839 aa11.73□□□□□ -0.53
CAPN1-225ENST00000533704 PCDHB7Q9Y5E2 793 aa11.73□□□□□ -0.53
CAPN1-225ENST00000533704 MRPL42Q9Y6G3 142 aaKnown RBP11.73□□□□□ -0.53
CAPN1-225ENST00000533704 REV3LO60673 3130 aa11.73□□□□□ -0.53
CAPN1-225ENST00000533704 BTBD18B2RXH4 712 aa11.72□□□□□ -0.53
CAPN1-225ENST00000533704 BAG4O95429 457 aaKnown RBP11.72□□□□□ -0.53
CAPN1-225ENST00000533704 MMP1P03956 469 aa11.72□□□□□ -0.53
CAPN1-225ENST00000533704 ATP2B1P20020 1258 aa11.72□□□□□ -0.53
CAPN1-225ENST00000533704 FGFR4P22455 802 aa11.72□□□□□ -0.53
CAPN1-225ENST00000533704 BMPR1AP36894 532 aa11.72□□□□□ -0.53
CAPN1-225ENST00000533704 SARSP49591 514 aaKnown RBP11.72□□□□□ -0.53
CAPN1-225ENST00000533704 PSMC5P62195 406 aa11.72□□□□□ -0.53
CAPN1-225ENST00000533704 ST3GAL1Q11201 340 aa11.72□□□□□ -0.53
CAPN1-225ENST00000533704 DRP2Q13474 957 aa11.72□□□□□ -0.53
CAPN1-225ENST00000533704 TIGD5Q53EQ6 642 aa11.72□□□□□ -0.53
CAPN1-225ENST00000533704 PLA2G4FQ68DD2 849 aa11.72□□□□□ -0.53
CAPN1-225ENST00000533704 B3GNT9Q6UX72 402 aa11.72□□□□□ -0.53
CAPN1-225ENST00000533704 CMTR2Q8IYT2 770 aaKnown RBP11.72□□□□□ -0.53
CAPN1-225ENST00000533704 LINC01465Q8N7H1 131 aa11.72□□□□□ -0.53
CAPN1-225ENST00000533704 ZNF689Q96CS4 500 aaPredicted RBP11.72□□□□□ -0.53
CAPN1-225ENST00000533704 FAM20AQ96MK3 541 aa11.72□□□□□ -0.53
CAPN1-225ENST00000533704 NECAB3Q96P71 396 aaPredicted RBP11.72□□□□□ -0.53
CAPN1-225ENST00000533704 UHRF1Q96T88 793 aaPredicted RBP11.72□□□□□ -0.53
CAPN1-225ENST00000533704 C11orf84Q9BUA3 381 aaPredicted RBP11.72□□□□□ -0.53
CAPN1-225ENST00000533704 RC3H2Q9HBD1 1191 aaKnown RBP11.72□□□□□ -0.53
CAPN1-225ENST00000533704 KCNMB3Q9NPA1 279 aa11.72□□□□□ -0.53
CAPN1-225ENST00000533704 C1orf112Q9NSG2 853 aa11.72□□□□□ -0.53
CAPN1-225ENST00000533704 BMP2KQ9NSY1 1161 aaPredicted RBP11.72□□□□□ -0.53
CAPN1-225ENST00000533704 VAV3Q9UKW4 847 aa11.72□□□□□ -0.53
CAPN1-225ENST00000533704 LIMCH1Q9UPQ0 1083 aa11.72□□□□□ -0.53
CAPN1-225ENST00000533704 RWDD3Q9Y3V2 267 aa11.72□□□□□ -0.53
CAPN1-225ENST00000533704 TBKBP1A7MCY6 615 aa11.71□□□□□ -0.53
CAPN1-225ENST00000533704 GRM6O15303 877 aa11.71□□□□□ -0.53
CAPN1-225ENST00000533704 CSDE1O75534 798 aaKnown RBP11.71□□□□□ -0.53
CAPN1-225ENST00000533704 RB1P06400 928 aa11.71□□□□□ -0.53
CAPN1-225ENST00000533704 EIF4BP23588 611 aaKnown RBP11.71□□□□□ -0.53
CAPN1-225ENST00000533704 QARSP47897 775 aaKnown RBP11.71□□□□□ -0.53
CAPN1-225ENST00000533704 DNM2P50570 870 aa11.71□□□□□ -0.53
CAPN1-225ENST00000533704 GPC3P51654 580 aa11.71□□□□□ -0.53
CAPN1-225ENST00000533704 CYP4A11Q02928 519 aa11.71□□□□□ -0.53
CAPN1-225ENST00000533704 PPP2R5CQ13362 524 aa11.71□□□□□ -0.53
CAPN1-225ENST00000533704 SAFBQ15424 915 aaKnown RBP eCLIP11.71□□□□□ -0.53
CAPN1-225ENST00000533704 TARBP2Q15633 366 aaKnown RBP11.71□□□□□ -0.53
CAPN1-225ENST00000533704 C8orf34Q49A92 452 aa11.71□□□□□ -0.53
CAPN1-225ENST00000533704 SLC24A5Q71RS6 500 aa11.71□□□□□ -0.53
CAPN1-225ENST00000533704 RNF169Q8NCN4 708 aa11.71□□□□□ -0.53
CAPN1-225ENST00000533704 HAS1Q92839 578 aa11.71□□□□□ -0.53
CAPN1-225ENST00000533704 TNFRSF25Q93038 417 aa11.71□□□□□ -0.53
CAPN1-225ENST00000533704 NIFKQ9BYG3 293 aaKnown RBP11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms