RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 LY9Q9HBG7 655 aa12.88□□□□□ -0.35
TRAPPC4-213ENST00000533149 NAP1L2Q9ULW6 460 aaPredicted RBP12.88□□□□□ -0.35
TRAPPC4-213ENST00000533149 TRPV2Q9Y5S1 764 aa12.88□□□□□ -0.35
TRAPPC4-213ENST00000533149 IGSF9BQ9UPX0 1349 aa12.88□□□□□ -0.35
TRAPPC4-213ENST00000533149 MYO10Q9HD67 2058 aa12.88□□□□□ -0.35
TRAPPC4-213ENST00000533149 KLF18A0A0U1RQI7 1052 aa12.88□□□□□ -0.35
TRAPPC4-213ENST00000533149 RRN3P2A6NIE6 340 aa12.88□□□□□ -0.35
TRAPPC4-213ENST00000533149 HIDE1A8MVS5 230 aa12.88□□□□□ -0.35
TRAPPC4-213ENST00000533149 PFKFB2O60825 505 aa12.88□□□□□ -0.35
TRAPPC4-213ENST00000533149 PDIA3P30101 505 aaKnown RBP12.88□□□□□ -0.35
TRAPPC4-213ENST00000533149 TCF7P36402 384 aaPredicted RBP12.88□□□□□ -0.35
TRAPPC4-213ENST00000533149 SP4Q02446 784 aa12.88□□□□□ -0.35
TRAPPC4-213ENST00000533149 KRT17Q04695 432 aa12.88□□□□□ -0.35
TRAPPC4-213ENST00000533149 WTAPQ15007 396 aa12.88□□□□□ -0.35
TRAPPC4-213ENST00000533149 SEC23AQ15436 765 aa12.88□□□□□ -0.35
TRAPPC4-213ENST00000533149 ATAT1Q5SQI0 421 aa12.88□□□□□ -0.35
TRAPPC4-213ENST00000533149 MARCH8Q5T0T0 291 aa12.88□□□□□ -0.35
TRAPPC4-213ENST00000533149 NFXL1Q6ZNB6 911 aa12.88□□□□□ -0.35
TRAPPC4-213ENST00000533149 FCHSD1Q86WN1 690 aa12.88□□□□□ -0.35
TRAPPC4-213ENST00000533149 CCDC83Q8IWF9 413 aa12.88□□□□□ -0.35
TRAPPC4-213ENST00000533149 INTS4Q96HW7 963 aaKnown RBP12.88□□□□□ -0.35
TRAPPC4-213ENST00000533149 SLKQ9H2G2 1235 aaPredicted RBP12.88□□□□□ -0.35
TRAPPC4-213ENST00000533149 CYP26B1Q9NR63 512 aa12.88□□□□□ -0.35
TRAPPC4-213ENST00000533149 TYW1Q9NV66 732 aaKnown RBP12.88□□□□□ -0.35
TRAPPC4-213ENST00000533149 CDH22Q9UJ99 828 aa12.88□□□□□ -0.35
TRAPPC4-213ENST00000533149 DBR1Q9UK59 544 aaKnown RBP12.88□□□□□ -0.35
TRAPPC4-213ENST00000533149 FBXL21Q9UKT6 434 aa12.88□□□□□ -0.35
TRAPPC4-213ENST00000533149 KAT6AQ92794 2004 aa12.87□□□□□ -0.35
TRAPPC4-213ENST00000533149 ZBTB5O15062 677 aa12.87□□□□□ -0.35
TRAPPC4-213ENST00000533149 MRPS9P82933 396 aaKnown RBP12.87□□□□□ -0.35
TRAPPC4-213ENST00000533149 ST3GAL1Q11201 340 aa12.87□□□□□ -0.35
TRAPPC4-213ENST00000533149 TDGQ13569 410 aa12.87□□□□□ -0.35
TRAPPC4-213ENST00000533149 RSPO4Q2I0M5 234 aaPredicted RBP12.87□□□□□ -0.35
TRAPPC4-213ENST00000533149 SGMS1Q86VZ5 419 aa12.87□□□□□ -0.35
TRAPPC4-213ENST00000533149 SIX5Q8N196 739 aa12.87□□□□□ -0.35
TRAPPC4-213ENST00000533149 TNPO1Q92973 898 aaKnown RBP12.87□□□□□ -0.35
TRAPPC4-213ENST00000533149 ACSF2Q96CM8 615 aaPredicted RBP12.87□□□□□ -0.35
TRAPPC4-213ENST00000533149 CELF4Q9BZC1 486 aaKnown RBP12.87□□□□□ -0.35
TRAPPC4-213ENST00000533149 FAM49AQ9H0Q0 323 aaPredicted RBP12.87□□□□□ -0.35
TRAPPC4-213ENST00000533149 C1orf112Q9NSG2 853 aa12.87□□□□□ -0.35
TRAPPC4-213ENST00000533149 HCFC2Q9Y5Z7 792 aa12.87□□□□□ -0.35
TRAPPC4-213ENST00000533149 R4GN57 208 aa12.87□□□□□ -0.35
TRAPPC4-213ENST00000533149 MYH6P13533 1939 aa12.86□□□□□ -0.35
TRAPPC4-213ENST00000533149 CCDC69A6NI79 296 aa12.86□□□□□ -0.35
TRAPPC4-213ENST00000533149 EOMESO95936 686 aa12.86□□□□□ -0.35
TRAPPC4-213ENST00000533149 IBSPP21815 317 aaPredicted RBP12.86□□□□□ -0.35
TRAPPC4-213ENST00000533149 PPM1AP35813 382 aa12.86□□□□□ -0.35
TRAPPC4-213ENST00000533149 SEMA3FQ13275 785 aa12.86□□□□□ -0.35
TRAPPC4-213ENST00000533149 SMC1AQ14683 1233 aaKnown RBP12.86□□□□□ -0.35
TRAPPC4-213ENST00000533149 BMS1Q14692 1282 aaKnown RBP12.86□□□□□ -0.35
TRAPPC4-213ENST00000533149 ST3GAL2Q16842 350 aa12.86□□□□□ -0.35
TRAPPC4-213ENST00000533149 ODR4Q5SWX8 454 aa12.86□□□□□ -0.35
TRAPPC4-213ENST00000533149 KIAA1841Q6NSI8 718 aa12.86□□□□□ -0.35
TRAPPC4-213ENST00000533149 SYNE3Q6ZMZ3 975 aa12.86□□□□□ -0.35
TRAPPC4-213ENST00000533149 SLC24A5Q71RS6 500 aa12.86□□□□□ -0.35
TRAPPC4-213ENST00000533149 TMC7Q7Z402 723 aa12.86□□□□□ -0.35
TRAPPC4-213ENST00000533149 RAB11FIP4Q86YS3 637 aa12.86□□□□□ -0.35
TRAPPC4-213ENST00000533149 ENAHQ8N8S7 591 aaPredicted RBP12.86□□□□□ -0.35
TRAPPC4-213ENST00000533149 MRPL43Q8N983 215 aaKnown RBP12.86□□□□□ -0.35
TRAPPC4-213ENST00000533149 GLG1Q92896 1179 aa12.86□□□□□ -0.35
TRAPPC4-213ENST00000533149 MTMR8Q96EF0 704 aa12.86□□□□□ -0.35
TRAPPC4-213ENST00000533149 TMX1Q9H3N1 280 aa12.86□□□□□ -0.35
TRAPPC4-213ENST00000533149 SMARCAD1Q9H4L7 1026 aa12.86□□□□□ -0.35
TRAPPC4-213ENST00000533149 ERVK-5Q9HDB9 667 aa12.86□□□□□ -0.35
TRAPPC4-213ENST00000533149 DZANK1Q9NVP4 752 aa12.86□□□□□ -0.35
TRAPPC4-213ENST00000533149 RTEL1Q9NZ71 1219 aa12.86□□□□□ -0.35
TRAPPC4-213ENST00000533149 DUSP12Q9UNI6 340 aa12.86□□□□□ -0.35
TRAPPC4-213ENST00000533149 KDM3AQ9Y4C1 1321 aa12.85□□□□□ -0.35
TRAPPC4-213ENST00000533149 VPS13AQ96RL7 3174 aa12.85□□□□□ -0.35
TRAPPC4-213ENST00000533149 DENND3A2RUS2 1198 aa12.85□□□□□ -0.35
TRAPPC4-213ENST00000533149 GOLGA8BA8MQT2 603 aa12.85□□□□□ -0.35
TRAPPC4-213ENST00000533149 STK25O00506 426 aa12.85□□□□□ -0.35
TRAPPC4-213ENST00000533149 PPP1R11O60927 126 aaPredicted RBP12.85□□□□□ -0.35
TRAPPC4-213ENST00000533149 MARK3P27448 753 aa12.85□□□□□ -0.35
TRAPPC4-213ENST00000533149 IGBP1P78318 339 aa12.85□□□□□ -0.35
TRAPPC4-213ENST00000533149 CCT2P78371 535 aaKnown RBP12.85□□□□□ -0.35
TRAPPC4-213ENST00000533149 TMEM62Q0P6H9 643 aa12.85□□□□□ -0.35
TRAPPC4-213ENST00000533149 SCRN1Q12765 414 aa12.85□□□□□ -0.35
TRAPPC4-213ENST00000533149 NFX1Q12986 1120 aaKnown RBP12.85□□□□□ -0.35
TRAPPC4-213ENST00000533149 IFIT1BQ5T764 474 aaKnown RBP12.85□□□□□ -0.35
TRAPPC4-213ENST00000533149 FAM102BQ5T8I3 360 aa12.85□□□□□ -0.35
TRAPPC4-213ENST00000533149 KIAA0319Q5VV43 1072 aa12.85□□□□□ -0.35
TRAPPC4-213ENST00000533149 XRRA1Q6P2D8 792 aa12.85□□□□□ -0.35
TRAPPC4-213ENST00000533149 NLRX1Q86UT6 975 aa12.85□□□□□ -0.35
TRAPPC4-213ENST00000533149 NME8Q8N427 588 aa12.85□□□□□ -0.35
TRAPPC4-213ENST00000533149 SEPT1Q8WYJ6 367 aa12.85□□□□□ -0.35
TRAPPC4-213ENST00000533149 GTF3C6Q969F1 213 aa12.85□□□□□ -0.35
TRAPPC4-213ENST00000533149 CWH43Q9H720 699 aa12.85□□□□□ -0.35
TRAPPC4-213ENST00000533149 ATP6V0A4Q9HBG4 840 aa12.85□□□□□ -0.35
TRAPPC4-213ENST00000533149 RGS18Q9NS28 235 aa12.85□□□□□ -0.35
TRAPPC4-213ENST00000533149 TELO2Q9Y4R8 837 aa12.85□□□□□ -0.35
TRAPPC4-213ENST00000533149 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.85□□□□□ -0.35
TRAPPC4-213ENST00000533149 SLC12A7Q9Y666 1083 aa12.85□□□□□ -0.35
TRAPPC4-213ENST00000533149 EP300Q09472 2414 aaPredicted RBP12.85□□□□□ -0.35
TRAPPC4-213ENST00000533149 KMT2BQ9UMN6 2715 aaPredicted RBP12.85□□□□□ -0.35
TRAPPC4-213ENST00000533149 FRMPD4Q14CM0 1322 aa12.84□□□□□ -0.35
TRAPPC4-213ENST00000533149 KLRF2D3W0D1 207 aa12.84□□□□□ -0.35
TRAPPC4-213ENST00000533149 ZBTB43O43298 467 aa12.84□□□□□ -0.35
TRAPPC4-213ENST00000533149 DTNBO60941 627 aa12.84□□□□□ -0.35
TRAPPC4-213ENST00000533149 WEE2P0C1S8 567 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms