RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 OSMRQ99650 979 aa34.03■■■■□ 3.04
SSSCA1-207ENST00000533115 TSPYL2Q9H2G4 693 aaPredicted RBP34.03■■■■□ 3.04
SSSCA1-207ENST00000533115 TMX1Q9H3N1 280 aa34.03■■■■□ 3.04
SSSCA1-207ENST00000533115 ERVK-5Q9HDB9 667 aa34.03■■■■□ 3.04
SSSCA1-207ENST00000533115 COL4A6Q14031 1691 aa34.03■■■■□ 3.04
SSSCA1-207ENST00000533115 TTC3P53804 2025 aa34.03■■■■□ 3.04
SSSCA1-207ENST00000533115 LPXNO60711 386 aa34.02■■■■□ 3.04
SSSCA1-207ENST00000533115 MTERF2Q49AM1 385 aa34.02■■■■□ 3.04
SSSCA1-207ENST00000533115 ODR4Q5SWX8 454 aa34.02■■■■□ 3.04
SSSCA1-207ENST00000533115 MICALL1Q8N3F8 863 aa34.02■■■■□ 3.04
SSSCA1-207ENST00000533115 C17orf80Q9BSJ5 609 aa34.02■■■■□ 3.04
SSSCA1-207ENST00000533115 SUGCTQ9HAC7 445 aa34.02■■■■□ 3.04
SSSCA1-207ENST00000533115 TMEM150BA6NC51 233 aa34.01■■■■□ 3.03
SSSCA1-207ENST00000533115 DDX11L8A8MPP1 907 aa34.01■■■■□ 3.03
SSSCA1-207ENST00000533115 QARSP47897 775 aaKnown RBP34.01■■■■□ 3.03
SSSCA1-207ENST00000533115 ZNF710Q8N1W2 664 aa34.01■■■■□ 3.03
SSSCA1-207ENST00000533115 GDPD5Q8WTR4 605 aa34.01■■■■□ 3.03
SSSCA1-207ENST00000533115 CEP89Q96ST8 783 aa34.01■■■■□ 3.03
SSSCA1-207ENST00000533115 ST3GAL5Q9UNP4 418 aa34.01■■■■□ 3.03
SSSCA1-207ENST00000533115 COL4A4P53420 1690 aaPredicted RBP34■■■■□ 3.03
SSSCA1-207ENST00000533115 GPR182O15218 404 aa34■■■■□ 3.03
SSSCA1-207ENST00000533115 ST18O60284 1047 aa34■■■■□ 3.03
SSSCA1-207ENST00000533115 DKC1O60832 514 aaKnown RBP eCLIP34■■■■□ 3.03
SSSCA1-207ENST00000533115 P4HBP07237 508 aaKnown RBP34■■■■□ 3.03
SSSCA1-207ENST00000533115 NLRP11P59045 1033 aaKnown RBP34■■■■□ 3.03
SSSCA1-207ENST00000533115 EPHA7Q15375 998 aa34■■■■□ 3.03
SSSCA1-207ENST00000533115 SAMD11Q96NU1 681 aa34■■■■□ 3.03
SSSCA1-207ENST00000533115 PRRC2BQ5JSZ5 2229 aaKnown RBP33.99■■■■□ 3.03
SSSCA1-207ENST00000533115 SPIRE1Q08AE8 756 aa33.99■■■■□ 3.03
SSSCA1-207ENST00000533115 CALCRLQ16602 461 aa33.99■■■■□ 3.03
SSSCA1-207ENST00000533115 NCAPH2Q6IBW4 605 aa33.99■■■■□ 3.03
SSSCA1-207ENST00000533115 ANO5Q75V66 913 aa33.99■■■■□ 3.03
SSSCA1-207ENST00000533115 FAM184AQ8NB25 1140 aa33.99■■■■□ 3.03
SSSCA1-207ENST00000533115 FBXO22Q8NEZ5 403 aa33.99■■■■□ 3.03
SSSCA1-207ENST00000533115 SH2D3AQ9BRG2 576 aa33.99■■■■□ 3.03
SSSCA1-207ENST00000533115 ADAMTS10Q9H324 1103 aa33.99■■■■□ 3.03
SSSCA1-207ENST00000533115 RC3H2Q9HBD1 1191 aaKnown RBP33.99■■■■□ 3.03
SSSCA1-207ENST00000533115 PRDM6Q9NQX0 595 aa33.99■■■■□ 3.03
SSSCA1-207ENST00000533115 WNT7AO00755 349 aa33.98■■■■□ 3.03
SSSCA1-207ENST00000533115 FAM228AQ86W67 206 aa33.98■■■■□ 3.03
SSSCA1-207ENST00000533115 NPAS4Q8IUM7 802 aa33.98■■■■□ 3.03
SSSCA1-207ENST00000533115 CRIPAKQ8N1N5 446 aa33.98■■■■□ 3.03
SSSCA1-207ENST00000533115 IL27Q8NEV9 243 aa33.98■■■■□ 3.03
SSSCA1-207ENST00000533115 FBXO18Q8NFZ0 1043 aa33.98■■■■□ 3.03
SSSCA1-207ENST00000533115 IGKV6-21A0A0C4DH24 114 aa33.97■■■■□ 3.03
SSSCA1-207ENST00000533115 NEMFO60524 1076 aa33.97■■■■□ 3.03
SSSCA1-207ENST00000533115 FIBCD1Q8N539 461 aa33.97■■■■□ 3.03
SSSCA1-207ENST00000533115 ZNF689Q96CS4 500 aaPredicted RBP33.97■■■■□ 3.03
SSSCA1-207ENST00000533115 LMCD1Q9NZU5 365 aa33.97■■■■□ 3.03
SSSCA1-207ENST00000533115 PCDHA12Q9UN75 941 aa33.97■■■■□ 3.03
SSSCA1-207ENST00000533115 ADGRA3Q8IWK6 1321 aa33.97■■■■□ 3.03
SSSCA1-207ENST00000533115 MGEA5O60502 916 aa33.96■■■■□ 3.03
SSSCA1-207ENST00000533115 DGKIO75912 1065 aa33.96■■■■□ 3.03
SSSCA1-207ENST00000533115 GPC3P51654 580 aa33.96■■■■□ 3.03
SSSCA1-207ENST00000533115 EPC2Q52LR7 807 aa33.96■■■■□ 3.03
SSSCA1-207ENST00000533115 FOXP1Q9H334 677 aaPredicted RBP33.96■■■■□ 3.03
SSSCA1-207ENST00000533115 WRAP73Q9P2S5 460 aaPredicted RBP33.96■■■■□ 3.03
SSSCA1-207ENST00000533115 MAFO75444 373 aaPredicted RBP33.95■■■■□ 3.03
SSSCA1-207ENST00000533115 STAG3L1P0CL83 205 aa33.95■■■■□ 3.03
SSSCA1-207ENST00000533115 PLA2G4FQ68DD2 849 aa33.95■■■■□ 3.03
SSSCA1-207ENST00000533115 TMEM192Q8IY95 271 aa33.95■■■■□ 3.03
SSSCA1-207ENST00000533115 DYDC2Q96IM9 177 aa33.95■■■■□ 3.03
SSSCA1-207ENST00000533115 ADAM2Q99965 735 aa33.95■■■■□ 3.03
SSSCA1-207ENST00000533115 LXNQ9BS40 222 aa33.95■■■■□ 3.03
SSSCA1-207ENST00000533115 CYP26B1Q9NR63 512 aa33.95■■■■□ 3.03
SSSCA1-207ENST00000533115 RGS18Q9NS28 235 aa33.95■■■■□ 3.03
SSSCA1-207ENST00000533115 RGL1Q9NZL6 768 aa33.95■■■■□ 3.03
SSSCA1-207ENST00000533115 DENND3A2RUS2 1198 aa33.94■■■■□ 3.02
SSSCA1-207ENST00000533115 EIF4BP23588 611 aaKnown RBP33.94■■■■□ 3.02
SSSCA1-207ENST00000533115 SARSP49591 514 aaKnown RBP33.94■■■■□ 3.02
SSSCA1-207ENST00000533115 DNM2P50570 870 aa33.94■■■■□ 3.02
SSSCA1-207ENST00000533115 DRP2Q13474 957 aa33.94■■■■□ 3.02
SSSCA1-207ENST00000533115 C4orf19Q8IY42 314 aa33.94■■■■□ 3.02
SSSCA1-207ENST00000533115 ZNF668Q96K58 619 aaPredicted RBP33.94■■■■□ 3.02
SSSCA1-207ENST00000533115 MTMR9Q96QG7 549 aa33.94■■■■□ 3.02
SSSCA1-207ENST00000533115 TTC12Q9H892 705 aaPredicted RBP33.94■■■■□ 3.02
SSSCA1-207ENST00000533115 C1orf112Q9NSG2 853 aa33.94■■■■□ 3.02
SSSCA1-207ENST00000533115 ATP2B1P20020 1258 aa33.93■■■■□ 3.02
SSSCA1-207ENST00000533115 BTG3Q14201 252 aaPredicted RBP33.93■■■■□ 3.02
SSSCA1-207ENST00000533115 SCLT1Q96NL6 688 aa33.93■■■■□ 3.02
SSSCA1-207ENST00000533115 JPH2Q9BR39 696 aaPredicted RBP33.93■■■■□ 3.02
SSSCA1-207ENST00000533115 ZSWIM4Q9H7M6 989 aa33.93■■■■□ 3.02
SSSCA1-207ENST00000533115 REV3LO60673 3130 aa33.93■■■■□ 3.02
SSSCA1-207ENST00000533115 DLL1O00548 723 aa33.92■■■■□ 3.02
SSSCA1-207ENST00000533115 TXKP42681 527 aa33.92■■■■□ 3.02
SSSCA1-207ENST00000533115 NPEPPSP55786 919 aa33.92■■■■□ 3.02
SSSCA1-207ENST00000533115 CDC42EP1Q00587 391 aa33.92■■■■□ 3.02
SSSCA1-207ENST00000533115 NLRP7Q8WX94 980 aa33.92■■■■□ 3.02
SSSCA1-207ENST00000533115 CEP170P1Q96L14 293 aa33.92■■■■□ 3.02
SSSCA1-207ENST00000533115 TBC1D32Q96NH3 1257 aa33.92■■■■□ 3.02
SSSCA1-207ENST00000533115 THEGQ9P2T0 379 aa33.92■■■■□ 3.02
SSSCA1-207ENST00000533115 LRFN2Q9ULH4 789 aa33.92■■■■□ 3.02
SSSCA1-207ENST00000533115 PPME1Q9Y570 386 aa33.92■■■■□ 3.02
SSSCA1-207ENST00000533115 NLRC5Q86WI3 1866 aa33.91■■■■□ 3.02
SSSCA1-207ENST00000533115 DARSP14868 501 aaKnown RBP33.91■■■■□ 3.02
SSSCA1-207ENST00000533115 YWHABP31946 246 aaKnown RBP33.91■■■■□ 3.02
SSSCA1-207ENST00000533115 MCM7P33993 719 aa33.91■■■■□ 3.02
SSSCA1-207ENST00000533115 CYP4A11Q02928 519 aa33.91■■■■□ 3.02
SSSCA1-207ENST00000533115 GNL2Q13823 731 aaKnown RBP33.91■■■■□ 3.02
SSSCA1-207ENST00000533115 CTTNQ14247 550 aaKnown RBP33.91■■■■□ 3.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms