RNA–Protein interactions for RNA: ENST00000533018.1

PCF11-206, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-206ENST00000533018 KLHL23Q8NBE8 558 aa20.12■□□□□ 0.81
PCF11-206ENST00000533018 KHSRPQ92945 711 aaKnown RBP eCLIP20.12■□□□□ 0.813e-7■■■□□ 15.3
PCF11-206ENST00000533018 P2RX5Q93086 422 aa20.12■□□□□ 0.81
PCF11-206ENST00000533018 GJA10Q969M2 543 aa20.12■□□□□ 0.81
PCF11-206ENST00000533018 MAP7D2Q96T17 732 aa20.12■□□□□ 0.81
PCF11-206ENST00000533018 C22orf23Q9BZE7 217 aa20.12■□□□□ 0.81
PCF11-206ENST00000533018 RGS18Q9NS28 235 aa20.12■□□□□ 0.81
PCF11-206ENST00000533018 C1orf112Q9NSG2 853 aa20.12■□□□□ 0.81
PCF11-206ENST00000533018 PCDHA4Q9UN74 947 aa20.12■□□□□ 0.81
PCF11-206ENST00000533018 FNDC1Q4ZHG4 1894 aaPredicted RBP20.11■□□□□ 0.81
PCF11-206ENST00000533018 TBKBP1A7MCY6 615 aa20.11■□□□□ 0.81
PCF11-206ENST00000533018 EPB41L2O43491 1005 aaKnown RBP20.11■□□□□ 0.81
PCF11-206ENST00000533018 DEXIO95424 95 aa20.11■□□□□ 0.81
PCF11-206ENST00000533018 OATP04181 439 aa20.11■□□□□ 0.81
PCF11-206ENST00000533018 ITGB1P05556 798 aa20.11■□□□□ 0.81
PCF11-206ENST00000533018 HYAL1Q12794 435 aa20.11■□□□□ 0.81
PCF11-206ENST00000533018 NAALADL2Q58DX5 795 aa20.11■□□□□ 0.81
PCF11-206ENST00000533018 SLC24A5Q71RS6 500 aa20.11■□□□□ 0.81
PCF11-206ENST00000533018 LRRC71Q8N4P6 559 aa20.11■□□□□ 0.81
PCF11-206ENST00000533018 PPP2R3CQ969Q6 453 aa20.11■□□□□ 0.81
PCF11-206ENST00000533018 ZNF274Q96GC6 653 aaPredicted RBP20.11■□□□□ 0.81
PCF11-206ENST00000533018 SCLT1Q96NL6 688 aa20.11■□□□□ 0.81
PCF11-206ENST00000533018 RIT2Q99578 217 aa20.11■□□□□ 0.81
PCF11-206ENST00000533018 PDRG1Q9NUG6 133 aa20.11■□□□□ 0.81
PCF11-206ENST00000533018 GPR32O75388 356 aa20.1■□□□□ 0.81
PCF11-206ENST00000533018 SFNP31947 248 aa20.1■□□□□ 0.81
PCF11-206ENST00000533018 GTF2F1P35269 517 aaKnown RBP eCLIP20.1■□□□□ 0.814e-14■■■■□ 21
PCF11-206ENST00000533018 JAK3P52333 1124 aa20.1■□□□□ 0.81
PCF11-206ENST00000533018 NLRP11P59045 1033 aaKnown RBP20.1■□□□□ 0.81
PCF11-206ENST00000533018 PRKCEQ02156 737 aa20.1■□□□□ 0.81
PCF11-206ENST00000533018 TMEM31Q5JXX7 168 aa20.1■□□□□ 0.81
PCF11-206ENST00000533018 FAM102BQ5T8I3 360 aa20.1■□□□□ 0.81
PCF11-206ENST00000533018 FAM43BQ6ZT52 329 aaPredicted RBP20.1■□□□□ 0.81
PCF11-206ENST00000533018 FAM228AQ86W67 206 aa20.1■□□□□ 0.81
PCF11-206ENST00000533018 BLIDQ8IZY5 108 aa20.1■□□□□ 0.81
PCF11-206ENST00000533018 SPPL3Q8TCT6 385 aa20.1■□□□□ 0.81
PCF11-206ENST00000533018 POF1BQ8WVV4 589 aa20.1■□□□□ 0.81
PCF11-206ENST00000533018 ZNF668Q96K58 619 aaPredicted RBP20.1■□□□□ 0.81
PCF11-206ENST00000533018 UNC45AQ9H3U1 944 aa20.1■□□□□ 0.81
PCF11-206ENST00000533018 ATP6V0A4Q9HBG4 840 aa20.1■□□□□ 0.81
PCF11-206ENST00000533018 PCDHB12Q9Y5F1 795 aa20.1■□□□□ 0.81
PCF11-206ENST00000533018 ZNF862O60290 1169 aa20.09■□□□□ 0.81
PCF11-206ENST00000533018 DNAJB1P25685 340 aa20.09■□□□□ 0.81
PCF11-206ENST00000533018 UGCGQ16739 394 aa20.09■□□□□ 0.81
PCF11-206ENST00000533018 MIER3Q7Z3K6 550 aa20.09■□□□□ 0.81
PCF11-206ENST00000533018 MICAL1Q8TDZ2 1067 aa20.09■□□□□ 0.81
PCF11-206ENST00000533018 SLC5A5Q92911 643 aa20.09■□□□□ 0.81
PCF11-206ENST00000533018 LRFN3Q9BTN0 628 aa20.09■□□□□ 0.81
PCF11-206ENST00000533018 TM6SF1Q9BZW5 370 aa20.09■□□□□ 0.81
PCF11-206ENST00000533018 AAASQ9NRG9 546 aa20.09■□□□□ 0.81
PCF11-206ENST00000533018 PLXNA4Q9HCM2 1894 aa20.09■□□□□ 0.81
PCF11-206ENST00000533018 FAM86C2PA6NEL3 165 aa20.08■□□□□ 0.81
PCF11-206ENST00000533018 C9IYK1 514 aa20.08■□□□□ 0.81
PCF11-206ENST00000533018 EDIL3O43854 480 aa20.08■□□□□ 0.81
PCF11-206ENST00000533018 TDP2O95551 362 aa20.08■□□□□ 0.81
PCF11-206ENST00000533018 ZSCAN20P17040 1043 aaPredicted RBP20.08■□□□□ 0.81
PCF11-206ENST00000533018 LTBRP36941 435 aa20.08■□□□□ 0.81
PCF11-206ENST00000533018 NDUFV1P49821 464 aa20.08■□□□□ 0.81
PCF11-206ENST00000533018 DLX2Q07687 328 aaPredicted RBP20.08■□□□□ 0.81
PCF11-206ENST00000533018 TBC1D8BQ0IIM8 1120 aa20.08■□□□□ 0.81
PCF11-206ENST00000533018 CAMK1Q14012 370 aa20.08■□□□□ 0.81
PCF11-206ENST00000533018 COL19A1Q14993 1142 aa20.08■□□□□ 0.81
PCF11-206ENST00000533018 Q4G0T1 1027 aa20.08■□□□□ 0.81
PCF11-206ENST00000533018 RBM23Q86U06 439 aaKnown RBP20.08■□□□□ 0.81
PCF11-206ENST00000533018 AIFM3Q96NN9 605 aa20.08■□□□□ 0.81
PCF11-206ENST00000533018 PI4K2BG5E9Z4 385 aa20.07■□□□□ 0.8
PCF11-206ENST00000533018 LINC01565O15544 149 aa20.07■□□□□ 0.8
PCF11-206ENST00000533018 FGFR1P11362 822 aa20.07■□□□□ 0.8
PCF11-206ENST00000533018 IRS1P35568 1242 aa20.07■□□□□ 0.8
PCF11-206ENST00000533018 NONOQ15233 471 aaKnown RBP eCLIP20.07■□□□□ 0.8
PCF11-206ENST00000533018 CTC1Q2NKJ3 1217 aa20.07■□□□□ 0.8
PCF11-206ENST00000533018 THNSL1Q8IYQ7 743 aa20.07■□□□□ 0.8
PCF11-206ENST00000533018 NLRP7Q8WX94 980 aa20.07■□□□□ 0.8
PCF11-206ENST00000533018 TYW1Q9NV66 732 aaKnown RBP20.07■□□□□ 0.8
PCF11-206ENST00000533018 TMEM161AQ9NX61 479 aa20.07■□□□□ 0.8
PCF11-206ENST00000533018 SEPT9Q9UHD8 586 aaPredicted RBP20.07■□□□□ 0.8
PCF11-206ENST00000533018 CDKL5O76039 1030 aa20.06■□□□□ 0.8
PCF11-206ENST00000533018 EIF4BP23588 611 aaKnown RBP20.06■□□□□ 0.8
PCF11-206ENST00000533018 NRIP1P48552 1158 aa20.06■□□□□ 0.8
PCF11-206ENST00000533018 MTERF2Q49AM1 385 aa20.06■□□□□ 0.8
PCF11-206ENST00000533018 GALNT17Q6IS24 598 aa20.06■□□□□ 0.8
PCF11-206ENST00000533018 RNF169Q8NCN4 708 aa20.06■□□□□ 0.8
PCF11-206ENST00000533018 ADAMTS10Q9H324 1103 aa20.06■□□□□ 0.8
PCF11-206ENST00000533018 KCNJ14Q9UNX9 436 aa20.06■□□□□ 0.8
PCF11-206ENST00000533018 PSMD10O75832 226 aa20.05■□□□□ 0.8
PCF11-206ENST00000533018 ADAM15Q13444 863 aa20.05■□□□□ 0.8
PCF11-206ENST00000533018 INF2Q27J81 1249 aa20.05■□□□□ 0.8
PCF11-206ENST00000533018 LETM2Q2VYF4 491 aa20.05■□□□□ 0.8
PCF11-206ENST00000533018 ADGRD2Q7Z7M1 963 aa20.05■□□□□ 0.8
PCF11-206ENST00000533018 ABI1Q8IZP0 508 aa20.05■□□□□ 0.8
PCF11-206ENST00000533018 ZNF710Q8N1W2 664 aa20.05■□□□□ 0.8
PCF11-206ENST00000533018 DAGLBQ8NCG7 672 aa20.05■□□□□ 0.8
PCF11-206ENST00000533018 RDM1Q8NG50 284 aa20.05■□□□□ 0.8
PCF11-206ENST00000533018 SH2D3AQ9BRG2 576 aa20.05■□□□□ 0.8
PCF11-206ENST00000533018 SLKQ9H2G2 1235 aaPredicted RBP20.05■□□□□ 0.8
PCF11-206ENST00000533018 ELAC1Q9H777 363 aaKnown RBP20.05■□□□□ 0.8
PCF11-206ENST00000533018 HCSTQ9UBK5 93 aa20.05■□□□□ 0.8
PCF11-206ENST00000533018 PRKAG3Q9UGI9 489 aa20.05■□□□□ 0.8
PCF11-206ENST00000533018 DDX25Q9UHL0 483 aaKnown RBP20.05■□□□□ 0.8
PCF11-206ENST00000533018 CD207Q9UJ71 328 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms