RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 GPR32O75388 356 aa17.23■□□□□ 0.35
CPSF1-210ENST00000532935 FOSL2P15408 326 aa17.23■□□□□ 0.35
CPSF1-210ENST00000532935 TRAPPC10P48553 1259 aa17.23■□□□□ 0.35
CPSF1-210ENST00000532935 CRYBB1P53674 252 aaPredicted RBP17.23■□□□□ 0.35
CPSF1-210ENST00000532935 TAP1Q03518 808 aa17.23■□□□□ 0.35
CPSF1-210ENST00000532935 PAK2Q13177 524 aa17.23■□□□□ 0.35
CPSF1-210ENST00000532935 ORC2Q13416 577 aaPredicted RBP17.23■□□□□ 0.35
CPSF1-210ENST00000532935 ZNF174Q15697 407 aa17.23■□□□□ 0.35
CPSF1-210ENST00000532935 KIZQ2M2Z5 673 aa17.23■□□□□ 0.35
CPSF1-210ENST00000532935 TTC38Q5R3I4 469 aa17.23■□□□□ 0.35
CPSF1-210ENST00000532935 PLA2G4FQ68DD2 849 aa17.23■□□□□ 0.35
CPSF1-210ENST00000532935 TOP1MTQ969P6 601 aa17.23■□□□□ 0.35
CPSF1-210ENST00000532935 DYDC2Q96IM9 177 aa17.23■□□□□ 0.35
CPSF1-210ENST00000532935 NOL7Q9UMY1 257 aaKnown RBP17.23■□□□□ 0.35
CPSF1-210ENST00000532935 SMC3Q9UQE7 1217 aa17.23■□□□□ 0.35
CPSF1-210ENST00000532935 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.23■□□□□ 0.35
CPSF1-210ENST00000532935 COL4A4P53420 1690 aaPredicted RBP17.23■□□□□ 0.35
CPSF1-210ENST00000532935 REV3LO60673 3130 aa17.23■□□□□ 0.35
CPSF1-210ENST00000532935 ENPP3O14638 875 aa17.22■□□□□ 0.35
CPSF1-210ENST00000532935 UPP2O95045 317 aa17.22■□□□□ 0.35
CPSF1-210ENST00000532935 CYP4A11Q02928 519 aa17.22■□□□□ 0.35
CPSF1-210ENST00000532935 TMEM266Q2M3C6 531 aa17.22■□□□□ 0.35
CPSF1-210ENST00000532935 C4orf19Q8IY42 314 aa17.22■□□□□ 0.35
CPSF1-210ENST00000532935 TMEM40Q8WWA1 233 aa17.22■□□□□ 0.35
CPSF1-210ENST00000532935 LINC01599Q8WXQ3 324 aa17.22■□□□□ 0.35
CPSF1-210ENST00000532935 OSMRQ99650 979 aa17.22■□□□□ 0.35
CPSF1-210ENST00000532935 EIF2AK1Q9BQI3 630 aaKnown RBP17.22■□□□□ 0.35
CPSF1-210ENST00000532935 FTHL17Q9BXU8 183 aa17.22■□□□□ 0.35
CPSF1-210ENST00000532935 ZSWIM4Q9H7M6 989 aa17.22■□□□□ 0.35
CPSF1-210ENST00000532935 NOC2LQ9Y3T9 749 aaKnown RBP17.22■□□□□ 0.35
CPSF1-210ENST00000532935 INSL6Q9Y581 213 aa17.22■□□□□ 0.35
CPSF1-210ENST00000532935 RALGAPA2Q2PPJ7 1873 aa17.22■□□□□ 0.35
CPSF1-210ENST00000532935 UNC80Q8N2C7 3258 aa17.22■□□□□ 0.35
CPSF1-210ENST00000532935 IGKV6-21A0A0C4DH24 114 aa17.21■□□□□ 0.35
CPSF1-210ENST00000532935 RPS6KA5O75582 802 aa17.21■□□□□ 0.35
CPSF1-210ENST00000532935 SLITRK3O94933 977 aa17.21■□□□□ 0.35
CPSF1-210ENST00000532935 NPEPPSP55786 919 aa17.21■□□□□ 0.35
CPSF1-210ENST00000532935 NLRP11P59045 1033 aaKnown RBP17.21■□□□□ 0.35
CPSF1-210ENST00000532935 HTRA4P83105 476 aaPredicted RBP17.21■□□□□ 0.35
CPSF1-210ENST00000532935 NFX1Q12986 1120 aaKnown RBP17.21■□□□□ 0.35
CPSF1-210ENST00000532935 CTTNQ14247 550 aaKnown RBP17.21■□□□□ 0.35
CPSF1-210ENST00000532935 TPH2Q8IWU9 490 aa17.21■□□□□ 0.35
CPSF1-210ENST00000532935 ZNF710Q8N1W2 664 aa17.21■□□□□ 0.35
CPSF1-210ENST00000532935 NEK9Q8TD19 979 aa17.21■□□□□ 0.35
CPSF1-210ENST00000532935 CEP170P1Q96L14 293 aa17.21■□□□□ 0.35
CPSF1-210ENST00000532935 GAS2L1Q99501 681 aaPredicted RBP17.21■□□□□ 0.35
CPSF1-210ENST00000532935 ADAMTS10Q9H324 1103 aa17.21■□□□□ 0.35
CPSF1-210ENST00000532935 CERS4Q9HA82 394 aa17.21■□□□□ 0.35
CPSF1-210ENST00000532935 ERVK-5Q9HDB9 667 aa17.21■□□□□ 0.35
CPSF1-210ENST00000532935 CYP26B1Q9NR63 512 aa17.21■□□□□ 0.35
CPSF1-210ENST00000532935 COL4A6Q14031 1691 aa17.2■□□□□ 0.34
CPSF1-210ENST00000532935 POTEMA6NI47 508 aa17.2■□□□□ 0.34
CPSF1-210ENST00000532935 H3BQV1 296 aa17.2■□□□□ 0.34
CPSF1-210ENST00000532935 MAFO75444 373 aaPredicted RBP17.2■□□□□ 0.34
CPSF1-210ENST00000532935 OR52Z1P0C646 297 aa17.2■□□□□ 0.34
CPSF1-210ENST00000532935 YWHABP31946 246 aaKnown RBP17.2■□□□□ 0.34
CPSF1-210ENST00000532935 DNM2P50570 870 aa17.2■□□□□ 0.34
CPSF1-210ENST00000532935 TOB1P50616 345 aaPredicted RBP17.2■□□□□ 0.34
CPSF1-210ENST00000532935 DRP2Q13474 957 aa17.2■□□□□ 0.34
CPSF1-210ENST00000532935 CUL4AQ13619 759 aa17.2■□□□□ 0.34
CPSF1-210ENST00000532935 NBR1Q14596 966 aa17.2■□□□□ 0.34
CPSF1-210ENST00000532935 ODR4Q5SWX8 454 aa17.2■□□□□ 0.34
CPSF1-210ENST00000532935 MCTP1Q6DN14 999 aa17.2■□□□□ 0.34
CPSF1-210ENST00000532935 RTN4RL1Q86UN2 441 aaPredicted RBP17.2■□□□□ 0.34
CPSF1-210ENST00000532935 ZNF579Q8NAF0 562 aaKnown RBP17.2■□□□□ 0.34
CPSF1-210ENST00000532935 YME1L1Q96TA2 773 aa17.2■□□□□ 0.34
CPSF1-210ENST00000532935 HSD17B14Q9BPX1 270 aa17.2■□□□□ 0.34
CPSF1-210ENST00000532935 JPH2Q9BR39 696 aaPredicted RBP17.2■□□□□ 0.34
CPSF1-210ENST00000532935 TSPYL2Q9H2G4 693 aaPredicted RBP17.2■□□□□ 0.34
CPSF1-210ENST00000532935 TMX1Q9H3N1 280 aa17.2■□□□□ 0.34
CPSF1-210ENST00000532935 PPME1Q9Y570 386 aa17.2■□□□□ 0.34
CPSF1-210ENST00000532935 LINC01553A4QN01 128 aa17.19■□□□□ 0.34
CPSF1-210ENST00000532935 GPR182O15218 404 aa17.19■□□□□ 0.34
CPSF1-210ENST00000532935 LYPLA2O95372 231 aa17.19■□□□□ 0.34
CPSF1-210ENST00000532935 GPC3P51654 580 aa17.19■□□□□ 0.34
CPSF1-210ENST00000532935 ADGRE1Q14246 886 aa17.19■□□□□ 0.34
CPSF1-210ENST00000532935 OTUD6AQ7L8S5 288 aa17.19■□□□□ 0.34
CPSF1-210ENST00000532935 SPRED2Q7Z698 418 aa17.19■□□□□ 0.34
CPSF1-210ENST00000532935 FAM228AQ86W67 206 aa17.19■□□□□ 0.34
CPSF1-210ENST00000532935 MAFAQ8NHW3 353 aaPredicted RBP17.19■□□□□ 0.34
CPSF1-210ENST00000532935 SP7Q8TDD2 431 aaPredicted RBP17.19■□□□□ 0.34
CPSF1-210ENST00000532935 ARNTL2Q8WYA1 636 aa17.19■□□□□ 0.34
CPSF1-210ENST00000532935 ZNF668Q96K58 619 aaPredicted RBP17.19■□□□□ 0.34
CPSF1-210ENST00000532935 ST3GAL5Q9UNP4 418 aa17.19■□□□□ 0.34
CPSF1-210ENST00000532935 KIAA1671Q9BY89 1806 aa17.19■□□□□ 0.34
CPSF1-210ENST00000532935 FNDC1Q4ZHG4 1894 aaPredicted RBP17.18■□□□□ 0.34
CPSF1-210ENST00000532935 EPOPA6NHQ4 379 aa17.18■□□□□ 0.34
CPSF1-210ENST00000532935 ZBTB39O15060 712 aa17.18■□□□□ 0.34
CPSF1-210ENST00000532935 MGEA5O60502 916 aa17.18■□□□□ 0.34
CPSF1-210ENST00000532935 EIF4BP23588 611 aaKnown RBP17.18■□□□□ 0.34
CPSF1-210ENST00000532935 RFC5P40937 340 aa17.18■□□□□ 0.34
CPSF1-210ENST00000532935 TECP42680 631 aa17.18■□□□□ 0.34
CPSF1-210ENST00000532935 XKR9Q5GH70 373 aa17.18■□□□□ 0.34
CPSF1-210ENST00000532935 LARP1BQ659C4 914 aaKnown RBP17.18■□□□□ 0.34
CPSF1-210ENST00000532935 FAM43BQ6ZT52 329 aaPredicted RBP17.18■□□□□ 0.34
CPSF1-210ENST00000532935 EXOC8Q8IYI6 725 aa17.18■□□□□ 0.34
CPSF1-210ENST00000532935 C4orf32Q8N8J7 132 aa17.18■□□□□ 0.34
CPSF1-210ENST00000532935 NLRP7Q8WX94 980 aa17.18■□□□□ 0.34
CPSF1-210ENST00000532935 SLC7A3Q8WY07 619 aa17.18■□□□□ 0.34
CPSF1-210ENST00000532935 SCLT1Q96NL6 688 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms