RNA–Protein interactions for RNA: ENST00000532285.1

CAPN1-222, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-222ENST00000532285 MTMR9Q96QG7 549 aa25.77■■□□□ 1.72
CAPN1-222ENST00000532285 CEP89Q96ST8 783 aa25.77■■□□□ 1.72
CAPN1-222ENST00000532285 TTC12Q9H892 705 aaPredicted RBP25.77■■□□□ 1.72
CAPN1-222ENST00000532285 TMEM150BA6NC51 233 aa25.76■■□□□ 1.71
CAPN1-222ENST00000532285 RPS6KA5O75582 802 aa25.76■■□□□ 1.71
CAPN1-222ENST00000532285 TXKP42681 527 aa25.76■■□□□ 1.71
CAPN1-222ENST00000532285 ORC2Q13416 577 aaPredicted RBP25.76■■□□□ 1.71
CAPN1-222ENST00000532285 C4orf19Q8IY42 314 aa25.76■■□□□ 1.71
CAPN1-222ENST00000532285 LXNQ9BS40 222 aa25.76■■□□□ 1.71
CAPN1-222ENST00000532285 CERS4Q9HA82 394 aa25.76■■□□□ 1.71
CAPN1-222ENST00000532285 NOC2LQ9Y3T9 749 aaKnown RBP25.76■■□□□ 1.71
CAPN1-222ENST00000532285 GTF3C3Q9Y5Q9 886 aa25.76■■□□□ 1.71
CAPN1-222ENST00000532285 ARID2Q68CP9 1835 aa25.76■■□□□ 1.71
CAPN1-222ENST00000532285 U2AF2P26368 475 aaKnown RBP eCLIP25.75■■□□□ 1.71
CAPN1-222ENST00000532285 DNM2P50570 870 aa25.75■■□□□ 1.71
CAPN1-222ENST00000532285 NLRP11P59045 1033 aaKnown RBP25.75■■□□□ 1.71
CAPN1-222ENST00000532285 NFX1Q12986 1120 aaKnown RBP25.75■■□□□ 1.71
CAPN1-222ENST00000532285 TMEM266Q2M3C6 531 aa25.75■■□□□ 1.71
CAPN1-222ENST00000532285 SP7Q8TDD2 431 aaPredicted RBP25.75■■□□□ 1.71
CAPN1-222ENST00000532285 TMEM40Q8WWA1 233 aa25.75■■□□□ 1.71
CAPN1-222ENST00000532285 ARNTL2Q8WYA1 636 aa25.75■■□□□ 1.71
CAPN1-222ENST00000532285 DYDC2Q96IM9 177 aa25.75■■□□□ 1.71
CAPN1-222ENST00000532285 PPP1R16BQ96T49 567 aa25.75■■□□□ 1.71
CAPN1-222ENST00000532285 YME1L1Q96TA2 773 aa25.75■■□□□ 1.71
CAPN1-222ENST00000532285 OSMRQ99650 979 aa25.75■■□□□ 1.71
CAPN1-222ENST00000532285 ZSWIM4Q9H7M6 989 aa25.75■■□□□ 1.71
CAPN1-222ENST00000532285 RGL1Q9NZL6 768 aa25.75■■□□□ 1.71
CAPN1-222ENST00000532285 NLRC5Q86WI3 1866 aa25.74■■□□□ 1.71
CAPN1-222ENST00000532285 IGKV6-21A0A0C4DH24 114 aa25.74■■□□□ 1.71
CAPN1-222ENST00000532285 LINC01553A4QN01 128 aa25.74■■□□□ 1.71
CAPN1-222ENST00000532285 GPR182O15218 404 aa25.74■■□□□ 1.71
CAPN1-222ENST00000532285 IGFBP4P22692 258 aa25.74■■□□□ 1.71
CAPN1-222ENST00000532285 TRAPPC10P48553 1259 aa25.74■■□□□ 1.71
CAPN1-222ENST00000532285 ADGRE1Q14246 886 aa25.74■■□□□ 1.71
CAPN1-222ENST00000532285 RTN4RL1Q86UN2 441 aaPredicted RBP25.74■■□□□ 1.71
CAPN1-222ENST00000532285 EXOC8Q8IYI6 725 aa25.74■■□□□ 1.71
CAPN1-222ENST00000532285 TGS1Q96RS0 853 aaKnown RBP25.74■■□□□ 1.71
CAPN1-222ENST00000532285 JPH2Q9BR39 696 aaPredicted RBP25.74■■□□□ 1.71
CAPN1-222ENST00000532285 SH2D3AQ9BRG2 576 aa25.74■■□□□ 1.71
CAPN1-222ENST00000532285 TSPYL2Q9H2G4 693 aaPredicted RBP25.74■■□□□ 1.71
CAPN1-222ENST00000532285 TMEM60Q9H2L4 133 aa25.74■■□□□ 1.71
CAPN1-222ENST00000532285 ERVK-5Q9HDB9 667 aa25.74■■□□□ 1.71
CAPN1-222ENST00000532285 CYP26B1Q9NR63 512 aa25.74■■□□□ 1.71
CAPN1-222ENST00000532285 WRAP73Q9P2S5 460 aaPredicted RBP25.74■■□□□ 1.71
CAPN1-222ENST00000532285 NOL7Q9UMY1 257 aaKnown RBP25.74■■□□□ 1.71
CAPN1-222ENST00000532285 PPME1Q9Y570 386 aa25.74■■□□□ 1.71
CAPN1-222ENST00000532285 MAFO75444 373 aaPredicted RBP25.73■■□□□ 1.71
CAPN1-222ENST00000532285 CDC42EP1Q00587 391 aa25.73■■□□□ 1.71
CAPN1-222ENST00000532285 PLA2G4FQ68DD2 849 aa25.73■■□□□ 1.71
CAPN1-222ENST00000532285 OTUD6AQ7L8S5 288 aa25.73■■□□□ 1.71
CAPN1-222ENST00000532285 NEK9Q8TD19 979 aa25.73■■□□□ 1.71
CAPN1-222ENST00000532285 LINC01599Q8WXQ3 324 aa25.73■■□□□ 1.71
CAPN1-222ENST00000532285 EIF2AK1Q9BQI3 630 aaKnown RBP25.73■■□□□ 1.71
CAPN1-222ENST00000532285 ADAMTS10Q9H324 1103 aa25.73■■□□□ 1.71
CAPN1-222ENST00000532285 TMX1Q9H3N1 280 aa25.73■■□□□ 1.71
CAPN1-222ENST00000532285 ST3GAL5Q9UNP4 418 aa25.73■■□□□ 1.71
CAPN1-222ENST00000532285 COL4A6Q14031 1691 aa25.73■■□□□ 1.71
CAPN1-222ENST00000532285 SLITRK3O94933 977 aa25.72■■□□□ 1.71
CAPN1-222ENST00000532285 GJB2P29033 226 aa25.72■■□□□ 1.71
CAPN1-222ENST00000532285 YWHABP31946 246 aaKnown RBP25.72■■□□□ 1.71
CAPN1-222ENST00000532285 GPC3P51654 580 aa25.72■■□□□ 1.71
CAPN1-222ENST00000532285 ERVK-21P61565 698 aa25.72■■□□□ 1.71
CAPN1-222ENST00000532285 CYP4A11Q02928 519 aa25.72■■□□□ 1.71
CAPN1-222ENST00000532285 CTTNQ14247 550 aaKnown RBP25.72■■□□□ 1.71
CAPN1-222ENST00000532285 ZNF174Q15697 407 aa25.72■■□□□ 1.71
CAPN1-222ENST00000532285 TTC38Q5R3I4 469 aa25.72■■□□□ 1.71
CAPN1-222ENST00000532285 TPH2Q8IWU9 490 aa25.72■■□□□ 1.71
CAPN1-222ENST00000532285 SLC17A8Q8NDX2 589 aa25.72■■□□□ 1.71
CAPN1-222ENST00000532285 CEP170P1Q96L14 293 aa25.72■■□□□ 1.71
CAPN1-222ENST00000532285 HSD17B14Q9BPX1 270 aa25.72■■□□□ 1.71
CAPN1-222ENST00000532285 ZSCAN21Q9Y5A6 473 aaPredicted RBP25.72■■□□□ 1.71
CAPN1-222ENST00000532285 RALGAPA2Q2PPJ7 1873 aa25.72■■□□□ 1.71
CAPN1-222ENST00000532285 PRUNE2Q8WUY3 3088 aa25.72■■□□□ 1.71
CAPN1-222ENST00000532285 COL4A4P53420 1690 aaPredicted RBP25.71■■□□□ 1.71
CAPN1-222ENST00000532285 EPOPA6NHQ4 379 aa25.71■■□□□ 1.71
CAPN1-222ENST00000532285 EIF4BP23588 611 aaKnown RBP25.71■■□□□ 1.71
CAPN1-222ENST00000532285 NPEPPSP55786 919 aa25.71■■□□□ 1.71
CAPN1-222ENST00000532285 SPRED2Q7Z698 418 aa25.71■■□□□ 1.71
CAPN1-222ENST00000532285 SMC3Q9UQE7 1217 aa25.71■■□□□ 1.71
CAPN1-222ENST00000532285 RFXAPO00287 272 aa25.7■■□□□ 1.7
CAPN1-222ENST00000532285 DRP2Q13474 957 aa25.7■■□□□ 1.7
CAPN1-222ENST00000532285 FAM228AQ86W67 206 aa25.7■■□□□ 1.7
CAPN1-222ENST00000532285 SLC7A3Q8WY07 619 aa25.7■■□□□ 1.7
CAPN1-222ENST00000532285 SCLT1Q96NL6 688 aa25.7■■□□□ 1.7
CAPN1-222ENST00000532285 DENND3A2RUS2 1198 aa25.69■■□□□ 1.7
CAPN1-222ENST00000532285 LYPLA2O95372 231 aa25.69■■□□□ 1.7
CAPN1-222ENST00000532285 OR52Z1P0C646 297 aa25.69■■□□□ 1.7
CAPN1-222ENST00000532285 STAG3L1P0CL83 205 aa25.69■■□□□ 1.7
CAPN1-222ENST00000532285 POU3F3P20264 500 aaPredicted RBP25.69■■□□□ 1.7
CAPN1-222ENST00000532285 RFC5P40937 340 aa25.69■■□□□ 1.7
CAPN1-222ENST00000532285 NPAS4Q8IUM7 802 aa25.69■■□□□ 1.7
CAPN1-222ENST00000532285 CRIPAKQ8N1N5 446 aa25.69■■□□□ 1.7
CAPN1-222ENST00000532285 NLRP7Q8WX94 980 aa25.69■■□□□ 1.7
CAPN1-222ENST00000532285 SAMD11Q96NU1 681 aa25.69■■□□□ 1.7
CAPN1-222ENST00000532285 ADAM2Q99965 735 aa25.69■■□□□ 1.7
CAPN1-222ENST00000532285 DHX33Q9H6R0 707 aaKnown RBP25.69■■□□□ 1.7
CAPN1-222ENST00000532285 RNF216Q9NWF9 866 aaPredicted RBP25.69■■□□□ 1.7
CAPN1-222ENST00000532285 SUCLA2Q9P2R7 463 aaPredicted RBP25.69■■□□□ 1.7
CAPN1-222ENST00000532285 POTEMA6NI47 508 aa25.68■■□□□ 1.7
CAPN1-222ENST00000532285 H3BQV1 296 aa25.68■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms