RNA–Protein interactions for RNA: ENST00000531741.1

VPS26B-206, Transcript of VPS26, retromer complex component B, humanhuman

TSL 2

Gene VPS26B, Length 2,073 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-206ENST00000531741 LMBR1Q8WVP7 490 aa18.4■□□□□ 0.54
VPS26B-206ENST00000531741 FAM151AQ8WW52 585 aa18.4■□□□□ 0.54
VPS26B-206ENST00000531741 CALR3Q96L12 384 aaKnown RBP18.4■□□□□ 0.54
VPS26B-206ENST00000531741 PCDHB13Q9Y5F0 798 aa18.4■□□□□ 0.54
VPS26B-206ENST00000531741 CLIC2O15247 247 aa18.39■□□□□ 0.53
VPS26B-206ENST00000531741 APBA3O96018 575 aa18.39■□□□□ 0.53
VPS26B-206ENST00000531741 POLD1P28340 1107 aa18.39■□□□□ 0.53
VPS26B-206ENST00000531741 STAT1P42224 750 aa18.39■□□□□ 0.53
VPS26B-206ENST00000531741 PPP2R5AQ15172 486 aa18.39■□□□□ 0.53
VPS26B-206ENST00000531741 FAM160B2Q86V87 743 aa18.39■□□□□ 0.53
VPS26B-206ENST00000531741 TPCN2Q8NHX9 752 aa18.39■□□□□ 0.53
VPS26B-206ENST00000531741 ACER1Q8TDN7 264 aa18.39■□□□□ 0.53
VPS26B-206ENST00000531741 ZBTB9Q96C00 473 aa18.39■□□□□ 0.53
VPS26B-206ENST00000531741 BCAS3Q9H6U6 928 aa18.39■□□□□ 0.53
VPS26B-206ENST00000531741 AJAP1Q9UKB5 411 aaPredicted RBP18.39■□□□□ 0.53
VPS26B-206ENST00000531741 ZBTB21Q9ULJ3 1066 aa18.39■□□□□ 0.53
VPS26B-206ENST00000531741 HSF2BPO75031 334 aa18.38■□□□□ 0.53
VPS26B-206ENST00000531741 H2AFZP0C0S5 128 aa18.38■□□□□ 0.53
VPS26B-206ENST00000531741 ZBTB48P10074 688 aaPredicted RBP18.38■□□□□ 0.53
VPS26B-206ENST00000531741 GUCY2CP25092 1073 aa18.38■□□□□ 0.53
VPS26B-206ENST00000531741 NMT1P30419 496 aaKnown RBP18.38■□□□□ 0.53
VPS26B-206ENST00000531741 MYBPC2Q14324 1141 aa18.38■□□□□ 0.53
VPS26B-206ENST00000531741 H2AFVQ71UI9 128 aa18.38■□□□□ 0.53
VPS26B-206ENST00000531741 SLC9A9Q8IVB4 645 aa18.38■□□□□ 0.53
VPS26B-206ENST00000531741 TSEN2Q8NCE0 465 aaKnown RBP18.38■□□□□ 0.53
VPS26B-206ENST00000531741 NEK9Q8TD19 979 aa18.38■□□□□ 0.53
VPS26B-206ENST00000531741 VCPKMTQ9H867 229 aa18.38■□□□□ 0.53
VPS26B-206ENST00000531741 PACSIN2Q9UNF0 486 aaPredicted RBP18.38■□□□□ 0.53
VPS26B-206ENST00000531741 HS2ST1Q7LGA3 356 aa18.38■□□□□ 0.53
VPS26B-206ENST00000531741 SLC30A5Q8TAD4 765 aa18.38■□□□□ 0.53
VPS26B-206ENST00000531741 WHAMMQ8TF30 809 aa18.38■□□□□ 0.53
VPS26B-206ENST00000531741 SCFD2Q8WU76 684 aa18.38■□□□□ 0.53
VPS26B-206ENST00000531741 HINFPQ9BQA5 517 aa18.38■□□□□ 0.53
VPS26B-206ENST00000531741 STRA6Q9BX79 667 aa18.38■□□□□ 0.53
VPS26B-206ENST00000531741 STK33Q9BYT3 514 aa18.38■□□□□ 0.53
VPS26B-206ENST00000531741 EPB41L5Q9HCM4 733 aa18.38■□□□□ 0.53
VPS26B-206ENST00000531741 SFI1A8K8P3 1242 aa18.37■□□□□ 0.53
VPS26B-206ENST00000531741 DDX3XO00571 662 aaKnown RBP eCLIP18.37■□□□□ 0.53
VPS26B-206ENST00000531741 TBC1D12O60347 775 aa18.37■□□□□ 0.53
VPS26B-206ENST00000531741 SOX5P35711 763 aa18.37■□□□□ 0.53
VPS26B-206ENST00000531741 FMO5P49326 533 aa18.37■□□□□ 0.53
VPS26B-206ENST00000531741 MRPS25P82663 173 aaKnown RBP18.37■□□□□ 0.53
VPS26B-206ENST00000531741 GUCY2DQ02846 1103 aa18.37■□□□□ 0.53
VPS26B-206ENST00000531741 GRIPAP1Q4V328 841 aa18.37■□□□□ 0.53
VPS26B-206ENST00000531741 FAM178BQ8IXR5 827 aa18.37■□□□□ 0.53
VPS26B-206ENST00000531741 SYCE1Q8N0S2 351 aa18.37■□□□□ 0.53
VPS26B-206ENST00000531741 TMEM174Q8WUU8 243 aa18.37■□□□□ 0.53
VPS26B-206ENST00000531741 KRT12Q99456 494 aa18.37■□□□□ 0.53
VPS26B-206ENST00000531741 RIT2Q99578 217 aa18.37■□□□□ 0.53
VPS26B-206ENST00000531741 SUCLA2Q9P2R7 463 aaPredicted RBP18.37■□□□□ 0.53
VPS26B-206ENST00000531741 A6NNZ2 444 aa18.37■□□□□ 0.53
VPS26B-206ENST00000531741 F8VZ95 297 aa18.37■□□□□ 0.53
VPS26B-206ENST00000531741 KCNK3O14649 394 aa18.37■□□□□ 0.53
VPS26B-206ENST00000531741 PPIP5K2O43314 1243 aa18.37■□□□□ 0.53
VPS26B-206ENST00000531741 CARSP49589 748 aaKnown RBP18.37■□□□□ 0.53
VPS26B-206ENST00000531741 TUBB8Q3ZCM7 444 aa18.37■□□□□ 0.53
VPS26B-206ENST00000531741 FKBP1CQ5VVH2 108 aa18.37■□□□□ 0.53
VPS26B-206ENST00000531741 IQCKQ8N0W5 287 aa18.37■□□□□ 0.53
VPS26B-206ENST00000531741 OLIG1Q8TAK6 271 aa18.37■□□□□ 0.53
VPS26B-206ENST00000531741 RUFY1Q96T51 708 aa18.37■□□□□ 0.53
VPS26B-206ENST00000531741 ZNF577Q9BSK1 485 aa18.37■□□□□ 0.53
VPS26B-206ENST00000531741 TSPYL1Q9H0U9 437 aa18.37■□□□□ 0.53
VPS26B-206ENST00000531741 AGPAT3Q9NRZ7 376 aa18.37■□□□□ 0.53
VPS26B-206ENST00000531741 STXBP5LQ9Y2K9 1186 aa18.37■□□□□ 0.53
VPS26B-206ENST00000531741 FRMD4BQ9Y2L6 1034 aa18.37■□□□□ 0.53
VPS26B-206ENST00000531741 TCP10L2B9ZVM9 353 aa18.36■□□□□ 0.53
VPS26B-206ENST00000531741 BHMG1C9JSJ3 638 aaPredicted RBP18.36■□□□□ 0.53
VPS26B-206ENST00000531741 CHMP2AO43633 222 aa18.36■□□□□ 0.53
VPS26B-206ENST00000531741 PPFIA4O75335 1185 aa18.36■□□□□ 0.53
VPS26B-206ENST00000531741 PPP1R37O75864 691 aa18.36■□□□□ 0.53
VPS26B-206ENST00000531741 BCRP11274 1271 aa18.36■□□□□ 0.53
VPS26B-206ENST00000531741 LMNB1P20700 586 aa18.36■□□□□ 0.53
VPS26B-206ENST00000531741 RFX1P22670 979 aa18.36■□□□□ 0.53
VPS26B-206ENST00000531741 CHRNA5P30532 468 aa18.36■□□□□ 0.53
VPS26B-206ENST00000531741 NOP2P46087 812 aaKnown RBP18.36■□□□□ 0.53
VPS26B-206ENST00000531741 ZC2HC1CQ53FD0 456 aaPredicted RBP18.36■□□□□ 0.53
VPS26B-206ENST00000531741 RSBN1LQ6PCB5 846 aaPredicted RBP18.36■□□□□ 0.53
VPS26B-206ENST00000531741 CD302Q8IX05 232 aa18.36■□□□□ 0.53
VPS26B-206ENST00000531741 C1orf131Q8NDD1 294 aaKnown RBP18.36■□□□□ 0.53
VPS26B-206ENST00000531741 SYT11Q9BT88 431 aa18.36■□□□□ 0.53
VPS26B-206ENST00000531741 TEKT3Q9BXF9 490 aa18.36■□□□□ 0.53
VPS26B-206ENST00000531741 UNC45AQ9H3U1 944 aa18.36■□□□□ 0.53
VPS26B-206ENST00000531741 ZNF219Q9P2Y4 722 aaPredicted RBP18.36■□□□□ 0.53
VPS26B-206ENST00000531741 ZNF70Q9UC06 446 aaPredicted RBP18.36■□□□□ 0.53
VPS26B-206ENST00000531741 FEM1BQ9UK73 627 aa18.36■□□□□ 0.53
VPS26B-206ENST00000531741 NFU1Q9UMS0 254 aa18.36■□□□□ 0.53
VPS26B-206ENST00000531741 CNTNAP1P78357 1384 aa18.36■□□□□ 0.53
VPS26B-206ENST00000531741 RGPD3A6NKT7 1758 aaPredicted RBP18.36■□□□□ 0.53
VPS26B-206ENST00000531741 RGPD4Q7Z3J3 1758 aa18.36■□□□□ 0.53
VPS26B-206ENST00000531741 EVI5O60447 810 aa18.35■□□□□ 0.53
VPS26B-206ENST00000531741 CCDC172P0C7W6 258 aa18.35■□□□□ 0.53
VPS26B-206ENST00000531741 CCDC174Q6PII3 467 aa18.35■□□□□ 0.53
VPS26B-206ENST00000531741 RASGEF1CQ8N431 466 aa18.35■□□□□ 0.53
VPS26B-206ENST00000531741 GMLQ99445 158 aa18.35■□□□□ 0.53
VPS26B-206ENST00000531741 WRAP73Q9P2S5 460 aaPredicted RBP18.35■□□□□ 0.53
VPS26B-206ENST00000531741 NCANO14594 1321 aa18.35■□□□□ 0.53
VPS26B-206ENST00000531741 CCDC188H7C350 402 aa18.35■□□□□ 0.53
VPS26B-206ENST00000531741 PGRMC1O00264 195 aaKnown RBP18.35■□□□□ 0.53
VPS26B-206ENST00000531741 RAD51CO43502 376 aa18.35■□□□□ 0.53
VPS26B-206ENST00000531741 DNA2P51530 1060 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms