RNA–Protein interactions for RNA: ENST00000531007.1

CTNND1-228, Transcript of catenin delta 1, humanhuman

TSL 4

Gene CTNND1, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-228ENST00000531007 RNF214Q8ND24 703 aa10.94□□□□□ -0.66
CTNND1-228ENST00000531007 LRRC15Q8TF66 581 aa10.94□□□□□ -0.66
CTNND1-228ENST00000531007 NOC3LQ8WTT2 800 aaKnown RBP10.94□□□□□ -0.66
CTNND1-228ENST00000531007 ZNF516Q92618 1163 aa10.94□□□□□ -0.66
CTNND1-228ENST00000531007 USP6NLQ92738 828 aa10.94□□□□□ -0.66
CTNND1-228ENST00000531007 STAMQ92783 540 aa10.94□□□□□ -0.66
CTNND1-228ENST00000531007 PHOX2BQ99453 314 aa10.94□□□□□ -0.66
CTNND1-228ENST00000531007 APBA2Q99767 749 aa10.94□□□□□ -0.66
CTNND1-228ENST00000531007 OLFML3Q9NRN5 406 aa10.94□□□□□ -0.66
CTNND1-228ENST00000531007 PANK4Q9NVE7 773 aa10.94□□□□□ -0.66
CTNND1-228ENST00000531007 PKD2L1Q9P0L9 805 aa10.94□□□□□ -0.66
CTNND1-228ENST00000531007 MAFBQ9Y5Q3 323 aaPredicted RBP10.94□□□□□ -0.66
CTNND1-228ENST00000531007 PLXNA1Q9UIW2 1896 aa10.93□□□□□ -0.66
CTNND1-228ENST00000531007 EMSYQ7Z589 1322 aa10.93□□□□□ -0.66
CTNND1-228ENST00000531007 NOP56O00567 594 aaKnown RBP10.93□□□□□ -0.66
CTNND1-228ENST00000531007 FGFR1OPO95684 399 aaKnown RBP10.93□□□□□ -0.66
CTNND1-228ENST00000531007 GGPS1O95749 300 aa10.93□□□□□ -0.66
CTNND1-228ENST00000531007 GH1P01241 217 aa10.93□□□□□ -0.66
CTNND1-228ENST00000531007 TXNP10599 105 aaKnown RBP10.93□□□□□ -0.66
CTNND1-228ENST00000531007 MAPTP10636 758 aaKnown RBP10.93□□□□□ -0.66
CTNND1-228ENST00000531007 IDEP14735 1019 aa10.93□□□□□ -0.66
CTNND1-228ENST00000531007 HOXD10P28358 340 aa10.93□□□□□ -0.66
CTNND1-228ENST00000531007 PSMC6P62333 389 aa10.93□□□□□ -0.66
CTNND1-228ENST00000531007 SP2Q02086 613 aa10.93□□□□□ -0.66
CTNND1-228ENST00000531007 CCDC173Q0VFZ6 552 aa10.93□□□□□ -0.66
CTNND1-228ENST00000531007 PAK1Q13153 545 aa10.93□□□□□ -0.66
CTNND1-228ENST00000531007 GIT2Q14161 759 aa10.93□□□□□ -0.66
CTNND1-228ENST00000531007 DHX8Q14562 1220 aaKnown RBP10.93□□□□□ -0.66
CTNND1-228ENST00000531007 ARSHQ5FYA8 562 aa10.93□□□□□ -0.66
CTNND1-228ENST00000531007 SPATA1Q5VX52 437 aa10.93□□□□□ -0.66
CTNND1-228ENST00000531007 C1orf186Q6ZWK4 172 aa10.93□□□□□ -0.66
CTNND1-228ENST00000531007 PLPPR4Q7Z2D5 763 aa10.93□□□□□ -0.66
CTNND1-228ENST00000531007 LUZP1Q86V48 1076 aa10.93□□□□□ -0.66
CTNND1-228ENST00000531007 DHX40Q8IX18 779 aaKnown RBP10.93□□□□□ -0.66
CTNND1-228ENST00000531007 BANK1Q8NDB2 785 aa10.93□□□□□ -0.66
CTNND1-228ENST00000531007 MCPH1Q8NEM0 835 aa10.93□□□□□ -0.66
CTNND1-228ENST00000531007 NLRP7Q8WX94 980 aa10.93□□□□□ -0.66
CTNND1-228ENST00000531007 DRC1Q96MC2 740 aa10.93□□□□□ -0.66
CTNND1-228ENST00000531007 UIMC1Q96RL1 719 aa10.93□□□□□ -0.66
CTNND1-228ENST00000531007 AZI2Q9H6S1 392 aa10.93□□□□□ -0.66
CTNND1-228ENST00000531007 C17orf75Q9HAS0 396 aa10.93□□□□□ -0.66
CTNND1-228ENST00000531007 PARVGQ9HBI0 331 aa10.93□□□□□ -0.66
CTNND1-228ENST00000531007 ZNF302Q9NR11 478 aa10.93□□□□□ -0.66
CTNND1-228ENST00000531007 NRBP2Q9NSY0 501 aa10.93□□□□□ -0.66
CTNND1-228ENST00000531007 GABBR1Q9UBS5 961 aa10.93□□□□□ -0.66
CTNND1-228ENST00000531007 Q9Y3F1 56 aa10.93□□□□□ -0.66
CTNND1-228ENST00000531007 UBE4BO95155 1302 aa10.92□□□□□ -0.66
CTNND1-228ENST00000531007 BACH1O14867 736 aa10.92□□□□□ -0.66
CTNND1-228ENST00000531007 GAS2O43903 313 aaKnown RBP10.92□□□□□ -0.66
CTNND1-228ENST00000531007 PPFIA4O75335 1185 aa10.92□□□□□ -0.66
CTNND1-228ENST00000531007 LGR5O75473 907 aa10.92□□□□□ -0.66
CTNND1-228ENST00000531007 DGAT1O75907 488 aa10.92□□□□□ -0.66
CTNND1-228ENST00000531007 SNAI1O95863 264 aaPredicted RBP10.92□□□□□ -0.66
CTNND1-228ENST00000531007 TPM3P06753 285 aa10.92□□□□□ -0.66
CTNND1-228ENST00000531007 RARRES1P49788 294 aa10.92□□□□□ -0.66
CTNND1-228ENST00000531007 ZNF131P52739 623 aa10.92□□□□□ -0.66
CTNND1-228ENST00000531007 LRRC63Q05C16 580 aa10.92□□□□□ -0.66
CTNND1-228ENST00000531007 SPAG1Q07617 926 aa10.92□□□□□ -0.66
CTNND1-228ENST00000531007 COASYQ13057 564 aa10.92□□□□□ -0.66
CTNND1-228ENST00000531007 ACVR2BQ13705 512 aa10.92□□□□□ -0.66
CTNND1-228ENST00000531007 DUSP28Q4G0W2 176 aa10.92□□□□□ -0.66
CTNND1-228ENST00000531007 HERC4Q5GLZ8 1057 aaPredicted RBP10.92□□□□□ -0.66
CTNND1-228ENST00000531007 FAM26FQ5R3K3 315 aa10.92□□□□□ -0.66
CTNND1-228ENST00000531007 SWSAP1Q6NVH7 229 aa10.92□□□□□ -0.66
CTNND1-228ENST00000531007 TAPT1Q6NXT6 567 aa10.92□□□□□ -0.66
CTNND1-228ENST00000531007 DYMQ7RTS9 669 aa10.92□□□□□ -0.66
CTNND1-228ENST00000531007 AOPEPQ8N6M6 819 aa10.92□□□□□ -0.66
CTNND1-228ENST00000531007 RDH13Q8NBN7 331 aa10.92□□□□□ -0.66
CTNND1-228ENST00000531007 ANKRD20A12PQ8NF67 263 aa10.92□□□□□ -0.66
CTNND1-228ENST00000531007 PPTC7Q8NI37 304 aa10.92□□□□□ -0.66
CTNND1-228ENST00000531007 PIGOQ8TEQ8 1089 aa10.92□□□□□ -0.66
CTNND1-228ENST00000531007 SPATA33Q96N06 139 aa10.92□□□□□ -0.66
CTNND1-228ENST00000531007 CTAGE1Q96RT6 745 aa10.92□□□□□ -0.66
CTNND1-228ENST00000531007 JPH2Q9BR39 696 aaPredicted RBP10.92□□□□□ -0.66
CTNND1-228ENST00000531007 NIFKQ9BYG3 293 aaKnown RBP10.92□□□□□ -0.66
CTNND1-228ENST00000531007 KATNBL1Q9H079 304 aa10.92□□□□□ -0.66
CTNND1-228ENST00000531007 R3HDMLQ9H3Y0 253 aa10.92□□□□□ -0.66
CTNND1-228ENST00000531007 SMARCAD1Q9H4L7 1026 aa10.92□□□□□ -0.66
CTNND1-228ENST00000531007 SAGE1Q9NXZ1 904 aa10.92□□□□□ -0.66
CTNND1-228ENST00000531007 LARSQ9P2J5 1176 aaKnown RBP10.92□□□□□ -0.66
CTNND1-228ENST00000531007 GJD2Q9UKL4 321 aa10.92□□□□□ -0.66
CTNND1-228ENST00000531007 SYNRGQ9UMZ2 1314 aa10.91□□□□□ -0.66
CTNND1-228ENST00000531007 GSTTP1A0A1W2PQM5 241 aa10.91□□□□□ -0.66
CTNND1-228ENST00000531007 H0YCG3 227 aa10.91□□□□□ -0.66
CTNND1-228ENST00000531007 EIF3DO15371 548 aaKnown RBP eCLIP10.91□□□□□ -0.66
CTNND1-228ENST00000531007 CBFA2T2O43439 604 aa10.91□□□□□ -0.66
CTNND1-228ENST00000531007 FAM13AO94988 1023 aa10.91□□□□□ -0.66
CTNND1-228ENST00000531007 CCNE1P24864 410 aa10.91□□□□□ -0.66
CTNND1-228ENST00000531007 CASP1P29466 404 aa10.91□□□□□ -0.66
CTNND1-228ENST00000531007 DEKP35659 375 aaKnown RBP10.91□□□□□ -0.66
CTNND1-228ENST00000531007 RFC5P40937 340 aa10.91□□□□□ -0.66
CTNND1-228ENST00000531007 PRCPP42785 496 aa10.91□□□□□ -0.66
CTNND1-228ENST00000531007 STAT5BP51692 787 aa10.91□□□□□ -0.66
CTNND1-228ENST00000531007 RTP1P59025 263 aa10.91□□□□□ -0.66
CTNND1-228ENST00000531007 SNRPFP62306 86 aaKnown RBP10.91□□□□□ -0.66
CTNND1-228ENST00000531007 LACTBP83111 547 aaPredicted RBP10.91□□□□□ -0.66
CTNND1-228ENST00000531007 SP3Q02447 781 aa10.91□□□□□ -0.66
CTNND1-228ENST00000531007 STK4Q13043 487 aa10.91□□□□□ -0.66
CTNND1-228ENST00000531007 NCAPHQ15003 741 aa10.91□□□□□ -0.66
CTNND1-228ENST00000531007 TPD52L1Q16890 204 aaPredicted RBP10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms