RNA–Protein interactions for RNA: ENST00000530927.5

GMDS-208, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GMDS, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-208ENST00000530927 TSHZ1Q6ZSZ6 1077 aa20.99■□□□□ 0.95
GMDS-208ENST00000530927 MYOCDQ8IZQ8 938 aa20.99■□□□□ 0.95
GMDS-208ENST00000530927 LINC01599Q8WXQ3 324 aa20.99■□□□□ 0.95
GMDS-208ENST00000530927 NOL7Q9UMY1 257 aaKnown RBP20.99■□□□□ 0.95
GMDS-208ENST00000530927 NOC2LQ9Y3T9 749 aaKnown RBP20.99■□□□□ 0.95
GMDS-208ENST00000530927 M0QZ92 97 aa20.98■□□□□ 0.95
GMDS-208ENST00000530927 RAB30Q15771 203 aa20.98■□□□□ 0.95
GMDS-208ENST00000530927 NME8Q8N427 588 aa20.98■□□□□ 0.95
GMDS-208ENST00000530927 PHOSPHO2Q8TCD6 241 aa20.98■□□□□ 0.95
GMDS-208ENST00000530927 CERS4Q9HA82 394 aa20.98■□□□□ 0.95
GMDS-208ENST00000530927 PADI3Q9ULW8 664 aa20.98■□□□□ 0.95
GMDS-208ENST00000530927 PCDHA11Q9Y5I1 949 aa20.98■□□□□ 0.95
GMDS-208ENST00000530927 ARID2Q68CP9 1835 aa20.98■□□□□ 0.95
GMDS-208ENST00000530927 K7ELQ4 463 aaPredicted RBP20.97■□□□□ 0.95
GMDS-208ENST00000530927 MAGEB2O15479 319 aa20.97■□□□□ 0.95
GMDS-208ENST00000530927 UPP2O95045 317 aa20.97■□□□□ 0.95
GMDS-208ENST00000530927 YWHABP31946 246 aaKnown RBP20.97■□□□□ 0.95
GMDS-208ENST00000530927 TRAPPC10P48553 1259 aa20.97■□□□□ 0.95
GMDS-208ENST00000530927 NLRP11P59045 1033 aaKnown RBP20.97■□□□□ 0.95
GMDS-208ENST00000530927 RTN4RL1Q86UN2 441 aaPredicted RBP20.97■□□□□ 0.95
GMDS-208ENST00000530927 MYLIPQ8WY64 445 aa20.97■□□□□ 0.95
GMDS-208ENST00000530927 CDX2Q99626 313 aaPredicted RBP20.97■□□□□ 0.95
GMDS-208ENST00000530927 HSD17B14Q9BPX1 270 aa20.97■□□□□ 0.95
GMDS-208ENST00000530927 TMX1Q9H3N1 280 aa20.97■□□□□ 0.95
GMDS-208ENST00000530927 CYP26B1Q9NR63 512 aa20.97■□□□□ 0.95
GMDS-208ENST00000530927 KDM3AQ9Y4C1 1321 aa20.96■□□□□ 0.95
GMDS-208ENST00000530927 TLL1O43897 1013 aa20.96■□□□□ 0.95
GMDS-208ENST00000530927 GJB5O95377 273 aa20.96■□□□□ 0.95
GMDS-208ENST00000530927 PTGDRQ13258 359 aa20.96■□□□□ 0.95
GMDS-208ENST00000530927 IL17AQ16552 155 aa20.96■□□□□ 0.95
GMDS-208ENST00000530927 PPP2R2DQ66LE6 453 aa20.96■□□□□ 0.95
GMDS-208ENST00000530927 FERMT3Q86UX7 667 aa20.96■□□□□ 0.95
GMDS-208ENST00000530927 KSR1Q8IVT5 923 aa20.96■□□□□ 0.95
GMDS-208ENST00000530927 C4orf19Q8IY42 314 aa20.96■□□□□ 0.95
GMDS-208ENST00000530927 CEP170P1Q96L14 293 aa20.96■□□□□ 0.95
GMDS-208ENST00000530927 ADAMTS10Q9H324 1103 aa20.96■□□□□ 0.95
GMDS-208ENST00000530927 ZSWIM4Q9H7M6 989 aa20.96■□□□□ 0.95
GMDS-208ENST00000530927 IGKV6-21A0A0C4DH24 114 aa20.95■□□□□ 0.95
GMDS-208ENST00000530927 MGEA5O60502 916 aa20.95■□□□□ 0.95
GMDS-208ENST00000530927 MED24O75448 989 aa20.95■□□□□ 0.95
GMDS-208ENST00000530927 CSDE1O75534 798 aaKnown RBP20.95■□□□□ 0.95
GMDS-208ENST00000530927 AMHP03971 560 aa20.95■□□□□ 0.95
GMDS-208ENST00000530927 SPATA31C1P0DKV0 1188 aa20.95■□□□□ 0.95
GMDS-208ENST00000530927 PAK2Q13177 524 aa20.95■□□□□ 0.95
GMDS-208ENST00000530927 FAM228AQ86W67 206 aa20.95■□□□□ 0.95
GMDS-208ENST00000530927 PIGOQ8TEQ8 1089 aa20.95■□□□□ 0.95
GMDS-208ENST00000530927 APBB2Q92870 758 aa20.95■□□□□ 0.95
GMDS-208ENST00000530927 MAP7D2Q96T17 732 aa20.95■□□□□ 0.95
GMDS-208ENST00000530927 ZBED2Q9BTP6 218 aa20.95■□□□□ 0.95
GMDS-208ENST00000530927 PRDM12Q9H4Q4 367 aa20.95■□□□□ 0.95
GMDS-208ENST00000530927 SLC28A3Q9HAS3 691 aa20.95■□□□□ 0.95
GMDS-208ENST00000530927 VPS37CA5D8V6 355 aaPredicted RBP20.95■□□□□ 0.94
GMDS-208ENST00000530927 ENPP3O14638 875 aa20.95■□□□□ 0.94
GMDS-208ENST00000530927 EFCAB14O75071 495 aa20.95■□□□□ 0.94
GMDS-208ENST00000530927 MAFO75444 373 aaPredicted RBP20.95■□□□□ 0.94
GMDS-208ENST00000530927 RPLP2P05387 115 aaKnown RBP20.95■□□□□ 0.94
GMDS-208ENST00000530927 IBSPP21815 317 aaPredicted RBP20.95■□□□□ 0.94
GMDS-208ENST00000530927 FGFR4P22455 802 aa20.95■□□□□ 0.94
GMDS-208ENST00000530927 GPC3P51654 580 aa20.95■□□□□ 0.94
GMDS-208ENST00000530927 NFX1Q12986 1120 aaKnown RBP20.95■□□□□ 0.94
GMDS-208ENST00000530927 ERVK-5Q9HDB9 667 aa20.95■□□□□ 0.94
GMDS-208ENST00000530927 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.95■□□□□ 0.94
GMDS-208ENST00000530927 TMEM265A0A087WTH1 108 aa20.94■□□□□ 0.94
GMDS-208ENST00000530927 EPOPA6NHQ4 379 aa20.94■□□□□ 0.94
GMDS-208ENST00000530927 PP2D1A8MPX8 630 aa20.94■□□□□ 0.94
GMDS-208ENST00000530927 RFXAPO00287 272 aa20.94■□□□□ 0.94
GMDS-208ENST00000530927 RPS6KA5O75582 802 aa20.94■□□□□ 0.94
GMDS-208ENST00000530927 TMOD1P28289 359 aa20.94■□□□□ 0.94
GMDS-208ENST00000530927 CRYBB1P53674 252 aaPredicted RBP20.94■□□□□ 0.94
GMDS-208ENST00000530927 TAP1Q03518 808 aa20.94■□□□□ 0.94
GMDS-208ENST00000530927 ORC2Q13416 577 aaPredicted RBP20.94■□□□□ 0.94
GMDS-208ENST00000530927 ECM1Q16610 540 aa20.94■□□□□ 0.94
GMDS-208ENST00000530927 XKR9Q5GH70 373 aa20.94■□□□□ 0.94
GMDS-208ENST00000530927 CATSPER3Q86XQ3 398 aa20.94■□□□□ 0.94
GMDS-208ENST00000530927 TMEM143Q96AN5 459 aa20.94■□□□□ 0.94
GMDS-208ENST00000530927 ST3GAL5Q9UNP4 418 aa20.94■□□□□ 0.94
GMDS-208ENST00000530927 REV3LO60673 3130 aa20.93■□□□□ 0.94
GMDS-208ENST00000530927 POTEGQ6S5H5 508 aa20.93■□□□□ 0.94
GMDS-208ENST00000530927 TOP1MTQ969P6 601 aa20.93■□□□□ 0.94
GMDS-208ENST00000530927 SNX21Q969T3 373 aa20.93■□□□□ 0.94
GMDS-208ENST00000530927 DHX33Q9H6R0 707 aaKnown RBP20.93■□□□□ 0.94
GMDS-208ENST00000530927 SUCLA2Q9P2R7 463 aaPredicted RBP20.93■□□□□ 0.94
GMDS-208ENST00000530927 SQORQ9Y6N5 450 aa20.93■□□□□ 0.94
GMDS-208ENST00000530927 PRUNE2Q8WUY3 3088 aa20.92■□□□□ 0.94
GMDS-208ENST00000530927 DKC1O60832 514 aaKnown RBP eCLIP20.92■□□□□ 0.949e-7■■■■■ 52.5
GMDS-208ENST00000530927 SYT1P21579 422 aa20.92■□□□□ 0.94
GMDS-208ENST00000530927 CDC25AP30304 524 aa20.92■□□□□ 0.94
GMDS-208ENST00000530927 POLGP54098 1239 aaPredicted RBP20.92■□□□□ 0.94
GMDS-208ENST00000530927 RHPN2Q8IUC4 686 aa20.92■□□□□ 0.94
GMDS-208ENST00000530927 USP38Q8NB14 1042 aa20.92■□□□□ 0.94
GMDS-208ENST00000530927 NLRP7Q8WX94 980 aa20.92■□□□□ 0.94
GMDS-208ENST00000530927 COL4A6Q14031 1691 aa20.92■□□□□ 0.94
GMDS-208ENST00000530927 A0A087WZ62 844 aa20.91■□□□□ 0.94
GMDS-208ENST00000530927 FXR2P51116 673 aaKnown RBP eCLIP20.91■□□□□ 0.94
GMDS-208ENST00000530927 EMC2Q15006 297 aa20.91■□□□□ 0.94
GMDS-208ENST00000530927 RILPL1Q5EBL4 403 aa20.91■□□□□ 0.94
GMDS-208ENST00000530927 NEK9Q8TD19 979 aa20.91■□□□□ 0.94
GMDS-208ENST00000530927 SCLT1Q96NL6 688 aa20.91■□□□□ 0.94
GMDS-208ENST00000530927 RAD9AQ99638 391 aa20.91■□□□□ 0.94
GMDS-208ENST00000530927 FDXACB1Q9BRP7 624 aaPredicted RBP20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms