RNA–Protein interactions for RNA: ENST00000530906.1

PCF11-205, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-205ENST00000530906 ADAMTS3O15072 1205 aa6.18□□□□□ -1.42
PCF11-205ENST00000530906 PPP1R11O60927 126 aaPredicted RBP6.18□□□□□ -1.42
PCF11-205ENST00000530906 SLU7O95391 586 aaKnown RBP6.18□□□□□ -1.42
PCF11-205ENST00000530906 GNA14O95837 355 aa6.18□□□□□ -1.42
PCF11-205ENST00000530906 NDUFB10O96000 172 aa6.18□□□□□ -1.42
PCF11-205ENST00000530906 RPS12P25398 132 aaKnown RBP6.18□□□□□ -1.42
PCF11-205ENST00000530906 SREBF1P36956 1147 aa6.18□□□□□ -1.42
PCF11-205ENST00000530906 ADH7P40394 386 aa6.18□□□□□ -1.42
PCF11-205ENST00000530906 TECP42680 631 aa6.18□□□□□ -1.42
PCF11-205ENST00000530906 TXKP42681 527 aa6.18□□□□□ -1.42
PCF11-205ENST00000530906 STAT2P52630 851 aa6.18□□□□□ -1.42
PCF11-205ENST00000530906 EIF6P56537 245 aaKnown RBP6.18□□□□□ -1.42
PCF11-205ENST00000530906 STX17P56962 302 aa6.18□□□□□ -1.42
PCF11-205ENST00000530906 PSMA6P60900 246 aaKnown RBP6.18□□□□□ -1.42
PCF11-205ENST00000530906 CDK17Q00537 523 aa6.18□□□□□ -1.42
PCF11-205ENST00000530906 ATP2B2Q01814 1243 aa6.18□□□□□ -1.42
PCF11-205ENST00000530906 PPP2R3AQ06190 1150 aa6.18□□□□□ -1.42
PCF11-205ENST00000530906 EHHADHQ08426 723 aa6.18□□□□□ -1.42
PCF11-205ENST00000530906 GRB10Q13322 594 aa6.18□□□□□ -1.42
PCF11-205ENST00000530906 TNFAIP1Q13829 316 aa6.18□□□□□ -1.42
PCF11-205ENST00000530906 CYP26C1Q6V0L0 522 aa6.18□□□□□ -1.42
PCF11-205ENST00000530906 ZNF662Q6ZS27 426 aa6.18□□□□□ -1.42
PCF11-205ENST00000530906 RASGRP2Q7LDG7 609 aa6.18□□□□□ -1.42
PCF11-205ENST00000530906 TRIM50Q86XT4 487 aa6.18□□□□□ -1.42
PCF11-205ENST00000530906 CCDC65Q8IXS2 484 aa6.18□□□□□ -1.42
PCF11-205ENST00000530906 NIM1KQ8IY84 436 aa6.18□□□□□ -1.42
PCF11-205ENST00000530906 TXLNBQ8N3L3 684 aa6.18□□□□□ -1.42
PCF11-205ENST00000530906 LARGE2Q8N3Y3 721 aa6.18□□□□□ -1.42
PCF11-205ENST00000530906 CSGALNACT2Q8N6G5 542 aa6.18□□□□□ -1.42
PCF11-205ENST00000530906 ZNF280CQ8ND82 737 aa6.18□□□□□ -1.42
PCF11-205ENST00000530906 SNX29Q8TEQ0 813 aa6.18□□□□□ -1.42
PCF11-205ENST00000530906 ANKRD7Q92527 254 aa6.18□□□□□ -1.42
PCF11-205ENST00000530906 COA7Q96BR5 231 aa6.18□□□□□ -1.42
PCF11-205ENST00000530906 HOOK2Q96ED9 719 aa6.18□□□□□ -1.42
PCF11-205ENST00000530906 HSH2DQ96JZ2 352 aa6.18□□□□□ -1.42
PCF11-205ENST00000530906 ERGIC2Q96RQ1 377 aa6.18□□□□□ -1.42
PCF11-205ENST00000530906 TSG101Q99816 390 aa6.18□□□□□ -1.42
PCF11-205ENST00000530906 MXD3Q9BW11 206 aa6.18□□□□□ -1.42
PCF11-205ENST00000530906 ANO3Q9BYT9 981 aa6.18□□□□□ -1.42
PCF11-205ENST00000530906 TSPAN10Q9H1Z9 355 aaPredicted RBP6.18□□□□□ -1.42
PCF11-205ENST00000530906 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.18□□□□□ -1.42
PCF11-205ENST00000530906 BLOC1S4Q9NUP1 217 aa6.18□□□□□ -1.42
PCF11-205ENST00000530906 MAP3K20Q9NYL2 800 aaKnown RBP6.18□□□□□ -1.42
PCF11-205ENST00000530906 CGNQ9P2M7 1197 aaKnown RBP6.18□□□□□ -1.42
PCF11-205ENST00000530906 DNAI1Q9UI46 699 aa6.18□□□□□ -1.42
PCF11-205ENST00000530906 ZNRF3Q9ULT6 936 aa6.18□□□□□ -1.42
PCF11-205ENST00000530906 LOXHD1Q8IVV2 1947 aa6.18□□□□□ -1.42
PCF11-205ENST00000530906 USP27XA6NNY8 438 aa6.17□□□□□ -1.42
PCF11-205ENST00000530906 YDJCA8MPS7 323 aa6.17□□□□□ -1.42
PCF11-205ENST00000530906 PP2D1A8MPX8 630 aa6.17□□□□□ -1.42
PCF11-205ENST00000530906 SLC37A4O43826 429 aa6.17□□□□□ -1.42
PCF11-205ENST00000530906 IPO7O95373 1038 aaKnown RBP6.17□□□□□ -1.42
PCF11-205ENST00000530906 TDP2O95551 362 aa6.17□□□□□ -1.42
PCF11-205ENST00000530906 GH2P01242 217 aa6.17□□□□□ -1.42
PCF11-205ENST00000530906 GYPCP04921 128 aa6.17□□□□□ -1.42
PCF11-205ENST00000530906 ASNSP08243 561 aa6.17□□□□□ -1.42
PCF11-205ENST00000530906 CHRNA5P30532 468 aa6.17□□□□□ -1.42
PCF11-205ENST00000530906 ARHGAP4P98171 946 aa6.17□□□□□ -1.42
PCF11-205ENST00000530906 UBXN1Q04323 297 aa6.17□□□□□ -1.42
PCF11-205ENST00000530906 TCP10Q12799 353 aa6.17□□□□□ -1.42
PCF11-205ENST00000530906 TNIP1Q15025 636 aa6.17□□□□□ -1.42
PCF11-205ENST00000530906 EZH2Q15910 746 aaKnown RBP6.17□□□□□ -1.42
PCF11-205ENST00000530906 FKBP15Q5T1M5 1219 aa6.17□□□□□ -1.42
PCF11-205ENST00000530906 TTBK2Q6IQ55 1244 aa6.17□□□□□ -1.42
PCF11-205ENST00000530906 KCTD1Q719H9 257 aa6.17□□□□□ -1.42
PCF11-205ENST00000530906 RAB44Q7Z6P3 723 aaPredicted RBP6.17□□□□□ -1.42
PCF11-205ENST00000530906 SIAH1Q8IUQ4 282 aa6.17□□□□□ -1.42
PCF11-205ENST00000530906 REXO1L1PQ8IX06 675 aa6.17□□□□□ -1.42
PCF11-205ENST00000530906 CCDC170Q8IYT3 715 aa6.17□□□□□ -1.42
PCF11-205ENST00000530906 MB21D1Q8N884 522 aa6.17□□□□□ -1.42
PCF11-205ENST00000530906 ZNF397Q8NF99 534 aaPredicted RBP6.17□□□□□ -1.42
PCF11-205ENST00000530906 OR8K1Q8NGG5 319 aa6.17□□□□□ -1.42
PCF11-205ENST00000530906 LPAR1Q92633 364 aa6.17□□□□□ -1.42
PCF11-205ENST00000530906 STAMQ92783 540 aa6.17□□□□□ -1.42
PCF11-205ENST00000530906 HAS1Q92839 578 aa6.17□□□□□ -1.42
PCF11-205ENST00000530906 PRMT6Q96LA8 375 aaPredicted RBP6.17□□□□□ -1.42
PCF11-205ENST00000530906 CEP63Q96MT8 703 aa6.17□□□□□ -1.42
PCF11-205ENST00000530906 UCN2Q96RP3 112 aa6.17□□□□□ -1.42
PCF11-205ENST00000530906 DNAJC7Q99615 494 aa6.17□□□□□ -1.42
PCF11-205ENST00000530906 TUBGCP2Q9BSJ2 902 aa6.17□□□□□ -1.42
PCF11-205ENST00000530906 PHACTR1Q9C0D0 580 aa6.17□□□□□ -1.42
PCF11-205ENST00000530906 CPVLQ9H3G5 476 aa6.17□□□□□ -1.42
PCF11-205ENST00000530906 TDRD3Q9H7E2 651 aaKnown RBP6.17□□□□□ -1.42
PCF11-205ENST00000530906 BRD7Q9NPI1 651 aa6.17□□□□□ -1.42
PCF11-205ENST00000530906 KCNQ5Q9NR82 932 aa6.17□□□□□ -1.42
PCF11-205ENST00000530906 ABHD10Q9NUJ1 306 aa6.17□□□□□ -1.42
PCF11-205ENST00000530906 TMEM260Q9NX78 707 aa6.17□□□□□ -1.42
PCF11-205ENST00000530906 TRMT1Q9NXH9 659 aaKnown RBP6.17□□□□□ -1.42
PCF11-205ENST00000530906 KCND2Q9NZV8 630 aa6.17□□□□□ -1.42
PCF11-205ENST00000530906 ZNF70Q9UC06 446 aaPredicted RBP6.17□□□□□ -1.42
PCF11-205ENST00000530906 FEM1BQ9UK73 627 aa6.17□□□□□ -1.42
PCF11-205ENST00000530906 CAPN11Q9UMQ6 739 aa6.17□□□□□ -1.42
PCF11-205ENST00000530906 GDAQ9Y2T3 454 aa6.17□□□□□ -1.42
PCF11-205ENST00000530906 LUC7L2Q9Y383 392 aaKnown RBP6.17□□□□□ -1.42
PCF11-205ENST00000530906 MRPL11Q9Y3B7 192 aaKnown RBP6.17□□□□□ -1.42
PCF11-205ENST00000530906 HCN4Q9Y3Q4 1203 aa6.17□□□□□ -1.42
PCF11-205ENST00000530906 LTBP3Q9NS15 1303 aa6.17□□□□□ -1.42
PCF11-205ENST00000530906 FER1L6Q2WGJ9 1857 aa6.16□□□□□ -1.42
PCF11-205ENST00000530906 FRMD3A2A2Y4 597 aa6.16□□□□□ -1.42
PCF11-205ENST00000530906 POM121CA8CG34 1229 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms