RNA–Protein interactions for RNA: ENST00000530094.5

CTNND1-225, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,814 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-225ENST00000530094 RECQLP46063 649 aaPredicted RBP9.09□□□□□ -0.95
CTNND1-225ENST00000530094 VPS41P49754 854 aa9.09□□□□□ -0.95
CTNND1-225ENST00000530094 EPHB4P54760 987 aa9.09□□□□□ -0.95
CTNND1-225ENST00000530094 ARPP19P56211 112 aa9.09□□□□□ -0.95
CTNND1-225ENST00000530094 SEMA3FQ13275 785 aa9.09□□□□□ -0.95
CTNND1-225ENST00000530094 NECTIN1Q15223 517 aa9.09□□□□□ -0.95
CTNND1-225ENST00000530094 BEST2Q8NFU1 509 aa9.09□□□□□ -0.95
CTNND1-225ENST00000530094 SPDYE1Q8NFV5 336 aaPredicted RBP9.09□□□□□ -0.95
CTNND1-225ENST00000530094 CHMP6Q96FZ7 201 aa9.09□□□□□ -0.95
CTNND1-225ENST00000530094 EFHD1Q9BUP0 239 aa9.09□□□□□ -0.95
CTNND1-225ENST00000530094 CAPS2Q9BXY5 557 aa9.09□□□□□ -0.95
CTNND1-225ENST00000530094 DRC3Q9H069 523 aa9.09□□□□□ -0.95
CTNND1-225ENST00000530094 STK36Q9NRP7 1315 aa9.09□□□□□ -0.95
CTNND1-225ENST00000530094 MEIS1O00470 390 aa9.09□□□□□ -0.95
CTNND1-225ENST00000530094 PRELPP51888 382 aa9.09□□□□□ -0.95
CTNND1-225ENST00000530094 EHHADHQ08426 723 aa9.09□□□□□ -0.95
CTNND1-225ENST00000530094 TTLL4Q14679 1199 aa9.09□□□□□ -0.95
CTNND1-225ENST00000530094 ZNF667Q5HYK9 610 aa9.09□□□□□ -0.95
CTNND1-225ENST00000530094 EXOC4Q96A65 974 aa9.09□□□□□ -0.95
CTNND1-225ENST00000530094 CPSF2Q9P2I0 782 aaKnown RBP9.09□□□□□ -0.95
CTNND1-225ENST00000530094 ZBED6P86452 979 aa9.09□□□□□ -0.95
CTNND1-225ENST00000530094 CDR2Q01850 454 aa9.09□□□□□ -0.95
CTNND1-225ENST00000530094 FBXO33Q7Z6M2 555 aa9.09□□□□□ -0.95
CTNND1-225ENST00000530094 MMP19Q99542 508 aa9.09□□□□□ -0.95
CTNND1-225ENST00000530094 RABEP2Q9H5N1 569 aa9.09□□□□□ -0.95
CTNND1-225ENST00000530094 CNOT10Q9H9A5 744 aaKnown RBP9.09□□□□□ -0.95
CTNND1-225ENST00000530094 GOLGA8SH3BPF8 625 aa9.09□□□□□ -0.95
CTNND1-225ENST00000530094 MAP3K7O43318 606 aa9.09□□□□□ -0.95
CTNND1-225ENST00000530094 CLNS1AP54105 237 aaKnown RBP9.09□□□□□ -0.95
CTNND1-225ENST00000530094 KRT33BQ14525 404 aa9.09□□□□□ -0.95
CTNND1-225ENST00000530094 HHIPL2Q6UWX4 724 aa9.09□□□□□ -0.95
CTNND1-225ENST00000530094 ENAHQ8N8S7 591 aaPredicted RBP9.09□□□□□ -0.95
CTNND1-225ENST00000530094 NSUN6Q8TEA1 469 aaKnown RBP9.09□□□□□ -0.95
CTNND1-225ENST00000530094 TRPV6Q9H1D0 765 aa9.09□□□□□ -0.95
CTNND1-225ENST00000530094 NXF1Q9UBU9 619 aaKnown RBP9.09□□□□□ -0.95
CTNND1-225ENST00000530094 ZNF212Q9UDV6 495 aa9.09□□□□□ -0.95
CTNND1-225ENST00000530094 CDC23Q9UJX2 597 aa9.09□□□□□ -0.95
CTNND1-225ENST00000530094 STRIP2Q9ULQ0 834 aa9.09□□□□□ -0.95
CTNND1-225ENST00000530094 FAM170AA1A519 330 aa9.08□□□□□ -0.96
CTNND1-225ENST00000530094 USP17L15C9J2P7 530 aa9.08□□□□□ -0.96
CTNND1-225ENST00000530094 USP17L13C9JLJ4 530 aa9.08□□□□□ -0.96
CTNND1-225ENST00000530094 USP17L11C9JVI0 530 aa9.08□□□□□ -0.96
CTNND1-225ENST00000530094 USP17L18D6R9N7 530 aa9.08□□□□□ -0.96
CTNND1-225ENST00000530094 USP17L22D6RA61 530 aa9.08□□□□□ -0.96
CTNND1-225ENST00000530094 USP17L17D6RBQ6 530 aa9.08□□□□□ -0.96
CTNND1-225ENST00000530094 USP17L19D6RCP7 530 aa9.08□□□□□ -0.96
CTNND1-225ENST00000530094 USP17L20D6RJB6 530 aa9.08□□□□□ -0.96
CTNND1-225ENST00000530094 ZBTB5O15062 677 aa9.08□□□□□ -0.96
CTNND1-225ENST00000530094 DDNO94850 711 aaPredicted RBP9.08□□□□□ -0.96
CTNND1-225ENST00000530094 TAC1P20366 129 aa9.08□□□□□ -0.96
CTNND1-225ENST00000530094 SLC8A1P32418 973 aa9.08□□□□□ -0.96
CTNND1-225ENST00000530094 PAPOLAP51003 745 aaKnown RBP9.08□□□□□ -0.96
CTNND1-225ENST00000530094 AP3M2P53677 418 aa9.08□□□□□ -0.96
CTNND1-225ENST00000530094 CDC42EP1Q00587 391 aa9.08□□□□□ -0.96
CTNND1-225ENST00000530094 USP17L24Q0WX57 530 aa9.08□□□□□ -0.96
CTNND1-225ENST00000530094 CLEC10AQ8IUN9 316 aa9.08□□□□□ -0.96
CTNND1-225ENST00000530094 C7orf31Q8N865 590 aa9.08□□□□□ -0.96
CTNND1-225ENST00000530094 TTC13Q8NBP0 860 aa9.08□□□□□ -0.96
CTNND1-225ENST00000530094 AGBL3Q8NEM8 1001 aa9.08□□□□□ -0.96
CTNND1-225ENST00000530094 ENOX1Q8TC92 643 aaKnown RBP9.08□□□□□ -0.96
CTNND1-225ENST00000530094 RAET1EQ8TD07 263 aa9.08□□□□□ -0.96
CTNND1-225ENST00000530094 FAM20AQ96MK3 541 aa9.08□□□□□ -0.96
CTNND1-225ENST00000530094 IRAK4Q9NWZ3 460 aa9.08□□□□□ -0.96
CTNND1-225ENST00000530094 TMEM63CQ9P1W3 806 aa9.08□□□□□ -0.96
CTNND1-225ENST00000530094 GSTA4O15217 222 aa9.08□□□□□ -0.96
CTNND1-225ENST00000530094 CASP14P31944 242 aa9.08□□□□□ -0.96
CTNND1-225ENST00000530094 EPHX2P34913 555 aa9.08□□□□□ -0.96
CTNND1-225ENST00000530094 TMTC3Q6ZXV5 915 aa9.08□□□□□ -0.96
CTNND1-225ENST00000530094 PCGF5Q86SE9 256 aa9.08□□□□□ -0.96
CTNND1-225ENST00000530094 ERICH1Q86X53 443 aa9.08□□□□□ -0.96
CTNND1-225ENST00000530094 RABGGTAQ92696 567 aa9.08□□□□□ -0.96
CTNND1-225ENST00000530094 GBP5Q96PP8 586 aa9.08□□□□□ -0.96
CTNND1-225ENST00000530094 FAM49AQ9H0Q0 323 aaPredicted RBP9.08□□□□□ -0.96
CTNND1-225ENST00000530094 HPCAL4Q9UM19 191 aa9.08□□□□□ -0.96
CTNND1-225ENST00000530094 PCDHA5Q9Y5H7 936 aa9.08□□□□□ -0.96
CTNND1-225ENST00000530094 DPYSL4O14531 572 aa9.08□□□□□ -0.96
CTNND1-225ENST00000530094 DNAJC8O75937 253 aaPredicted RBP9.08□□□□□ -0.96
CTNND1-225ENST00000530094 FCER1AP12319 257 aa9.08□□□□□ -0.96
CTNND1-225ENST00000530094 STAT3P40763 770 aa9.08□□□□□ -0.96
CTNND1-225ENST00000530094 PROM2Q8N271 834 aa9.08□□□□□ -0.96
CTNND1-225ENST00000530094 GTF3C2Q8WUA4 911 aaPredicted RBP9.08□□□□□ -0.96
CTNND1-225ENST00000530094 TRIM15Q9C019 465 aa9.08□□□□□ -0.96
CTNND1-225ENST00000530094 FTOQ9C0B1 505 aaKnown RBP eCLIP9.08□□□□□ -0.962e-18■□□□□ 11.2
CTNND1-225ENST00000530094 SPDYE2BA6NHP3 402 aa9.08□□□□□ -0.96
CTNND1-225ENST00000530094 UBE2Q2LH0YL09 131 aa9.08□□□□□ -0.96
CTNND1-225ENST00000530094 LUC7L3O95232 432 aaKnown RBP9.08□□□□□ -0.96
CTNND1-225ENST00000530094 SPDYE6P0CI01 402 aa9.08□□□□□ -0.96
CTNND1-225ENST00000530094 SNAPC2Q13487 334 aa9.08□□□□□ -0.96
CTNND1-225ENST00000530094 MTMR1Q13613 665 aa9.08□□□□□ -0.96
CTNND1-225ENST00000530094 C12orf60Q5U649 245 aa9.08□□□□□ -0.96
CTNND1-225ENST00000530094 USP17L6PQ6QN14 398 aa9.08□□□□□ -0.96
CTNND1-225ENST00000530094 MICAL1Q8TDZ2 1067 aa9.08□□□□□ -0.96
CTNND1-225ENST00000530094 FAM151AQ8WW52 585 aa9.08□□□□□ -0.96
CTNND1-225ENST00000530094 VPS39Q96JC1 886 aa9.08□□□□□ -0.96
CTNND1-225ENST00000530094 DESI2Q9BSY9 194 aa9.08□□□□□ -0.96
CTNND1-225ENST00000530094 PCIF1Q9H4Z3 704 aa9.08□□□□□ -0.96
CTNND1-225ENST00000530094 MAN1B1Q9UKM7 699 aa9.08□□□□□ -0.96
CTNND1-225ENST00000530094 KIF1AQ12756 1690 aa9.08□□□□□ -0.96
CTNND1-225ENST00000530094 IQANK1A0A1B0GTG1 560 aa9.07□□□□□ -0.96
CTNND1-225ENST00000530094 TMEM247A6NEH6 219 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms