RNA–Protein interactions for RNA: ENST00000530004.5

TTC39A-216, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 1 (best) BASIC

Gene TTC39A, Length 1,780 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-216ENST00000530004 CCSAPQ6IQ19 270 aaPredicted RBP15.96■□□□□ 0.15
TTC39A-216ENST00000530004 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.96■□□□□ 0.15
TTC39A-216ENST00000530004 RNF180Q86T96 592 aa15.96■□□□□ 0.15
TTC39A-216ENST00000530004 SPC24Q8NBT2 197 aa15.96■□□□□ 0.15
TTC39A-216ENST00000530004 MRFAP1L1Q96HT8 127 aa15.96■□□□□ 0.15
TTC39A-216ENST00000530004 DHTKD1Q96HY7 919 aaPredicted RBP15.96■□□□□ 0.15
TTC39A-216ENST00000530004 ZNF302Q9NR11 478 aa15.96■□□□□ 0.15
TTC39A-216ENST00000530004 IFNKQ9P0W0 207 aa15.96■□□□□ 0.15
TTC39A-216ENST00000530004 GABBR1Q9UBS5 961 aa15.96■□□□□ 0.15
TTC39A-216ENST00000530004 EMSYQ7Z589 1322 aa15.96■□□□□ 0.15
TTC39A-216ENST00000530004 FRMD3A2A2Y4 597 aa15.95■□□□□ 0.14
TTC39A-216ENST00000530004 SERPINC1P01008 464 aa15.95■□□□□ 0.14
TTC39A-216ENST00000530004 LGALS2P05162 132 aa15.95■□□□□ 0.14
TTC39A-216ENST00000530004 GJB1P08034 283 aa15.95■□□□□ 0.14
TTC39A-216ENST00000530004 CDK11BP21127 795 aaKnown RBP15.95■□□□□ 0.14
TTC39A-216ENST00000530004 CDC25BP30305 580 aa15.95■□□□□ 0.14
TTC39A-216ENST00000530004 STAT5BP51692 787 aa15.95■□□□□ 0.14
TTC39A-216ENST00000530004 GIT2Q14161 759 aa15.95■□□□□ 0.14
TTC39A-216ENST00000530004 LRRC41Q15345 812 aa15.95■□□□□ 0.14
TTC39A-216ENST00000530004 UGCGQ16739 394 aa15.95■□□□□ 0.14
TTC39A-216ENST00000530004 RINT1Q6NUQ1 792 aa15.95■□□□□ 0.14
TTC39A-216ENST00000530004 TRIM50Q86XT4 487 aa15.95■□□□□ 0.14
TTC39A-216ENST00000530004 DRC7Q8IY82 874 aa15.95■□□□□ 0.14
TTC39A-216ENST00000530004 AFAP1L1Q8TED9 768 aa15.95■□□□□ 0.14
TTC39A-216ENST00000530004 REEP2Q9BRK0 252 aa15.95■□□□□ 0.14
TTC39A-216ENST00000530004 C16orf70Q9BSU1 422 aa15.95■□□□□ 0.14
TTC39A-216ENST00000530004 XPO4Q9C0E2 1151 aaKnown RBP15.95■□□□□ 0.14
TTC39A-216ENST00000530004 AZI2Q9H6S1 392 aa15.95■□□□□ 0.14
TTC39A-216ENST00000530004 MAFBQ9Y5Q3 323 aaPredicted RBP15.95■□□□□ 0.14
TTC39A-216ENST00000530004 IGSF9BQ9UPX0 1349 aa15.95■□□□□ 0.14
TTC39A-216ENST00000530004 TRIM49BA6NDI0 452 aa15.95■□□□□ 0.14
TTC39A-216ENST00000530004 ZEB2O60315 1214 aa15.95■□□□□ 0.14
TTC39A-216ENST00000530004 SGPL1O95470 568 aa15.95■□□□□ 0.14
TTC39A-216ENST00000530004 MYCNP04198 464 aaPredicted RBP15.95■□□□□ 0.14
TTC39A-216ENST00000530004 PSMC5P62195 406 aa15.95■□□□□ 0.14
TTC39A-216ENST00000530004 HERC4Q5GLZ8 1057 aaPredicted RBP15.95■□□□□ 0.14
TTC39A-216ENST00000530004 FAM26FQ5R3K3 315 aa15.95■□□□□ 0.14
TTC39A-216ENST00000530004 FAM160B1Q5W0V3 765 aa15.95■□□□□ 0.14
TTC39A-216ENST00000530004 ARRDC4Q8NCT1 418 aa15.95■□□□□ 0.14
TTC39A-216ENST00000530004 U2AF1L4Q8WU68 220 aaKnown RBP15.95■□□□□ 0.14
TTC39A-216ENST00000530004 GLG1Q92896 1179 aa15.95■□□□□ 0.14
TTC39A-216ENST00000530004 ATP6V0A1Q93050 837 aa15.95■□□□□ 0.14
TTC39A-216ENST00000530004 ZHX3Q9H4I2 956 aa15.95■□□□□ 0.14
TTC39A-216ENST00000530004 SMARCAD1Q9H4L7 1026 aa15.95■□□□□ 0.14
TTC39A-216ENST00000530004 OGDHLQ9ULD0 1010 aa15.95■□□□□ 0.14
TTC39A-216ENST00000530004 ARHGEF35A5YM69 484 aa15.94■□□□□ 0.14
TTC39A-216ENST00000530004 MYL3P08590 195 aa15.94■□□□□ 0.14
TTC39A-216ENST00000530004 ZNF286BP0CG31 522 aa15.94■□□□□ 0.14
TTC39A-216ENST00000530004 PMS1P54277 932 aaKnown RBP15.94■□□□□ 0.14
TTC39A-216ENST00000530004 PURAQ00577 322 aaKnown RBP15.94■□□□□ 0.14
TTC39A-216ENST00000530004 KCNA10Q16322 511 aa15.94■□□□□ 0.14
TTC39A-216ENST00000530004 PLPPR4Q7Z2D5 763 aa15.94■□□□□ 0.14
TTC39A-216ENST00000530004 PCSK9Q8NBP7 692 aaKnown RBP15.94■□□□□ 0.14
TTC39A-216ENST00000530004 CRISPLD2Q9H0B8 497 aa15.94■□□□□ 0.14
TTC39A-216ENST00000530004 ZNF862O60290 1169 aa15.93■□□□□ 0.14
TTC39A-216ENST00000530004 KPNA6O60684 536 aa15.93■□□□□ 0.14
TTC39A-216ENST00000530004 LYPLA2O95372 231 aa15.93■□□□□ 0.14
TTC39A-216ENST00000530004 ASGR1P07306 291 aa15.93■□□□□ 0.14
TTC39A-216ENST00000530004 CCNE1P24864 410 aa15.93■□□□□ 0.14
TTC39A-216ENST00000530004 UBASH3AP57075 661 aa15.93■□□□□ 0.14
TTC39A-216ENST00000530004 CDKAL1Q5VV42 579 aa15.93■□□□□ 0.14
TTC39A-216ENST00000530004 C1orf186Q6ZWK4 172 aa15.93■□□□□ 0.14
TTC39A-216ENST00000530004 C4orf19Q8IY42 314 aa15.93■□□□□ 0.14
TTC39A-216ENST00000530004 GUF1Q8N442 669 aaKnown RBP15.93■□□□□ 0.14
TTC39A-216ENST00000530004 GLIS3Q8NEA6 775 aa15.93■□□□□ 0.14
TTC39A-216ENST00000530004 P2RX5Q93086 422 aa15.93■□□□□ 0.14
TTC39A-216ENST00000530004 TBC1D7Q9P0N9 293 aa15.93■□□□□ 0.14
TTC39A-216ENST00000530004 BICDL2A1A5D9 508 aa15.92■□□□□ 0.14
TTC39A-216ENST00000530004 RSPH10B2B2RC85 870 aa15.92■□□□□ 0.14
TTC39A-216ENST00000530004 H3BRB1 525 aa15.92■□□□□ 0.14
TTC39A-216ENST00000530004 CBFA2T2O43439 604 aa15.92■□□□□ 0.14
TTC39A-216ENST00000530004 DKC1O60832 514 aaKnown RBP eCLIP15.92■□□□□ 0.14
TTC39A-216ENST00000530004 TBCAO75347 108 aaKnown RBP15.92■□□□□ 0.14
TTC39A-216ENST00000530004 F2P00734 622 aa15.92■□□□□ 0.14
TTC39A-216ENST00000530004 RSPH10BP0C881 870 aa15.92■□□□□ 0.14
TTC39A-216ENST00000530004 ATP4AP20648 1035 aa15.92■□□□□ 0.14
TTC39A-216ENST00000530004 YWHABP31946 246 aaKnown RBP15.92■□□□□ 0.14
TTC39A-216ENST00000530004 GJA8P48165 433 aa15.92■□□□□ 0.14
TTC39A-216ENST00000530004 SLC26A2P50443 739 aa15.92■□□□□ 0.14
TTC39A-216ENST00000530004 COL13A1Q5TAT6 717 aaPredicted RBP15.92■□□□□ 0.14
TTC39A-216ENST00000530004 TTI2Q6NXR4 508 aa15.92■□□□□ 0.14
TTC39A-216ENST00000530004 CXCL17Q6UXB2 119 aa15.92■□□□□ 0.14
TTC39A-216ENST00000530004 KAT2BQ92831 832 aa15.92■□□□□ 0.14
TTC39A-216ENST00000530004 TSEN34Q9BSV6 310 aaKnown RBP15.92■□□□□ 0.14
TTC39A-216ENST00000530004 TMEM106CQ9BVX2 250 aa15.92■□□□□ 0.14
TTC39A-216ENST00000530004 TUT1Q9H6E5 874 aaKnown RBP15.92■□□□□ 0.14
TTC39A-216ENST00000530004 ERAP1Q9NZ08 941 aa15.92■□□□□ 0.14
TTC39A-216ENST00000530004 KCND2Q9NZV8 630 aa15.92■□□□□ 0.14
TTC39A-216ENST00000530004 DBR1Q9UK59 544 aaKnown RBP15.92■□□□□ 0.14
TTC39A-216ENST00000530004 ZNF215Q9UL58 517 aaPredicted RBP15.92■□□□□ 0.14
TTC39A-216ENST00000530004 PCDHA2Q9Y5H9 948 aa15.92■□□□□ 0.14
TTC39A-216ENST00000530004 BRCA2P51587 3418 aa15.92■□□□□ 0.14
TTC39A-216ENST00000530004 MOXD2PA6NHM9 499 aa15.92■□□□□ 0.14
TTC39A-216ENST00000530004 GOLGA6L6A8MZA4 724 aa15.92■□□□□ 0.14
TTC39A-216ENST00000530004 DNM1LO00429 736 aa15.92■□□□□ 0.14
TTC39A-216ENST00000530004 MARK3P27448 753 aa15.92■□□□□ 0.14
TTC39A-216ENST00000530004 HS1BP3Q53T59 392 aa15.92■□□□□ 0.14
TTC39A-216ENST00000530004 ANKRD40Q6AI12 368 aa15.92■□□□□ 0.14
TTC39A-216ENST00000530004 SFR1Q86XK3 245 aa15.92■□□□□ 0.14
TTC39A-216ENST00000530004 MYOCDQ8IZQ8 938 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms