RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 ZNF579Q8NAF0 562 aaKnown RBP14.18□□□□□ -0.14
CCDC90B-216ENST00000529856 ERMNQ8TAM6 284 aa14.18□□□□□ -0.14
CCDC90B-216ENST00000529856 APBB2Q92870 758 aa14.18□□□□□ -0.14
CCDC90B-216ENST00000529856 CEP170P1Q96L14 293 aa14.18□□□□□ -0.14
CCDC90B-216ENST00000529856 SLC9A7Q96T83 725 aa14.18□□□□□ -0.14
CCDC90B-216ENST00000529856 POLR3CQ9BUI4 534 aaPredicted RBP14.18□□□□□ -0.14
CCDC90B-216ENST00000529856 IFIH1Q9BYX4 1025 aaKnown RBP14.18□□□□□ -0.14
CCDC90B-216ENST00000529856 AGO3Q9H9G7 860 aaKnown RBP14.18□□□□□ -0.14
CCDC90B-216ENST00000529856 CDHR5Q9HBB8 845 aa14.18□□□□□ -0.14
CCDC90B-216ENST00000529856 MTMR6Q9Y217 621 aa14.18□□□□□ -0.14
CCDC90B-216ENST00000529856 LOXHD1Q8IVV2 1947 aa14.17□□□□□ -0.14
CCDC90B-216ENST00000529856 MED24O75448 989 aa14.17□□□□□ -0.14
CCDC90B-216ENST00000529856 RPA1P27694 616 aa14.17□□□□□ -0.14
CCDC90B-216ENST00000529856 PBX2P40425 430 aa14.17□□□□□ -0.14
CCDC90B-216ENST00000529856 DNM2P50570 870 aa14.17□□□□□ -0.14
CCDC90B-216ENST00000529856 CRYBB1P53674 252 aaPredicted RBP14.17□□□□□ -0.14
CCDC90B-216ENST00000529856 ATP2C1P98194 919 aaPredicted RBP14.17□□□□□ -0.14
CCDC90B-216ENST00000529856 DRP2Q13474 957 aa14.17□□□□□ -0.14
CCDC90B-216ENST00000529856 IL17AQ16552 155 aa14.17□□□□□ -0.14
CCDC90B-216ENST00000529856 KIZQ2M2Z5 673 aa14.17□□□□□ -0.14
CCDC90B-216ENST00000529856 DTHD1Q6ZMT9 781 aa14.17□□□□□ -0.14
CCDC90B-216ENST00000529856 CATSPER3Q86XQ3 398 aa14.17□□□□□ -0.14
CCDC90B-216ENST00000529856 EXOC8Q8IYI6 725 aa14.17□□□□□ -0.14
CCDC90B-216ENST00000529856 IGSF22Q8N9C0 903 aa14.17□□□□□ -0.14
CCDC90B-216ENST00000529856 MAP7D2Q96T17 732 aa14.17□□□□□ -0.14
CCDC90B-216ENST00000529856 JPH2Q9BR39 696 aaPredicted RBP14.17□□□□□ -0.14
CCDC90B-216ENST00000529856 PBX4Q9BYU1 374 aa14.17□□□□□ -0.14
CCDC90B-216ENST00000529856 DHX33Q9H6R0 707 aaKnown RBP14.17□□□□□ -0.14
CCDC90B-216ENST00000529856 TUFT1Q9NNX1 390 aa14.17□□□□□ -0.14
CCDC90B-216ENST00000529856 ANKEF1Q9NU02 776 aa14.17□□□□□ -0.14
CCDC90B-216ENST00000529856 LRWD1Q9UFC0 647 aa14.17□□□□□ -0.14
CCDC90B-216ENST00000529856 AKT3Q9Y243 479 aa14.17□□□□□ -0.14
CCDC90B-216ENST00000529856 SZT2Q5T011 3432 aa14.16□□□□□ -0.14
CCDC90B-216ENST00000529856 MICAL3Q7RTP6 2002 aa14.16□□□□□ -0.14
CCDC90B-216ENST00000529856 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.16□□□□□ -0.14
CCDC90B-216ENST00000529856 STX6O43752 255 aa14.16□□□□□ -0.14
CCDC90B-216ENST00000529856 CD52P31358 61 aa14.16□□□□□ -0.14
CCDC90B-216ENST00000529856 RFC5P40937 340 aa14.16□□□□□ -0.14
CCDC90B-216ENST00000529856 RABGGTBP53611 331 aa14.16□□□□□ -0.14
CCDC90B-216ENST00000529856 NLRP11P59045 1033 aaKnown RBP14.16□□□□□ -0.14
CCDC90B-216ENST00000529856 DEFB103AP81534 67 aa14.16□□□□□ -0.14
CCDC90B-216ENST00000529856 RESTQ13127 1097 aa14.16□□□□□ -0.14
CCDC90B-216ENST00000529856 RAB30Q15771 203 aa14.16□□□□□ -0.14
CCDC90B-216ENST00000529856 XKR9Q5GH70 373 aa14.16□□□□□ -0.14
CCDC90B-216ENST00000529856 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.16□□□□□ -0.147e-9■■■■■ 34.2
CCDC90B-216ENST00000529856 HERC6Q8IVU3 1022 aa14.16□□□□□ -0.14
CCDC90B-216ENST00000529856 SLC7A3Q8WY07 619 aa14.16□□□□□ -0.14
CCDC90B-216ENST00000529856 RAB34Q9BZG1 259 aa14.16□□□□□ -0.14
CCDC90B-216ENST00000529856 ADAMTS10Q9H324 1103 aa14.16□□□□□ -0.14
CCDC90B-216ENST00000529856 MSRAQ9UJ68 235 aa14.16□□□□□ -0.14
CCDC90B-216ENST00000529856 PADI3Q9ULW8 664 aa14.16□□□□□ -0.14
CCDC90B-216ENST00000529856 GINS2Q9Y248 185 aa14.16□□□□□ -0.14
CCDC90B-216ENST00000529856 PCDHA11Q9Y5I1 949 aa14.16□□□□□ -0.14
CCDC90B-216ENST00000529856 A0A087WWV3 80 aa14.15□□□□□ -0.14
CCDC90B-216ENST00000529856 HSP90AA1P07900 732 aaKnown RBP14.15□□□□□ -0.14
CCDC90B-216ENST00000529856 MUTP22033 750 aa14.15□□□□□ -0.14
CCDC90B-216ENST00000529856 DNAJB2P25686 324 aa14.15□□□□□ -0.14
CCDC90B-216ENST00000529856 RARRES1P49788 294 aa14.15□□□□□ -0.14
CCDC90B-216ENST00000529856 GPC3P51654 580 aa14.15□□□□□ -0.14
CCDC90B-216ENST00000529856 POLGP54098 1239 aaPredicted RBP14.15□□□□□ -0.14
CCDC90B-216ENST00000529856 CDC42EP1Q00587 391 aa14.15□□□□□ -0.14
CCDC90B-216ENST00000529856 PAK2Q13177 524 aa14.15□□□□□ -0.14
CCDC90B-216ENST00000529856 ARL6IP4Q66PJ3 421 aaKnown RBP14.15□□□□□ -0.14
CCDC90B-216ENST00000529856 FAM43BQ6ZT52 329 aaPredicted RBP14.15□□□□□ -0.14
CCDC90B-216ENST00000529856 Q7L0L9 218 aa14.15□□□□□ -0.14
CCDC90B-216ENST00000529856 PIGOQ8TEQ8 1089 aa14.15□□□□□ -0.14
CCDC90B-216ENST00000529856 TMEM40Q8WWA1 233 aa14.15□□□□□ -0.14
CCDC90B-216ENST00000529856 TIFAQ96CG3 184 aa14.15□□□□□ -0.14
CCDC90B-216ENST00000529856 NACC1Q96RE7 527 aa14.15□□□□□ -0.14
CCDC90B-216ENST00000529856 PPP1R16BQ96T49 567 aa14.15□□□□□ -0.14
CCDC90B-216ENST00000529856 OSMRQ99650 979 aa14.15□□□□□ -0.14
CCDC90B-216ENST00000529856 SUCLA2Q9P2R7 463 aaPredicted RBP14.15□□□□□ -0.14
CCDC90B-216ENST00000529856 NOC2LQ9Y3T9 749 aaKnown RBP14.15□□□□□ -0.14
CCDC90B-216ENST00000529856 STK24Q9Y6E0 443 aa14.15□□□□□ -0.14
CCDC90B-216ENST00000529856 PTPRSQ13332 1948 aa14.15□□□□□ -0.14
CCDC90B-216ENST00000529856 GBF1Q92538 1859 aa14.14□□□□□ -0.15
CCDC90B-216ENST00000529856 TMEM265A0A087WTH1 108 aa14.14□□□□□ -0.15
CCDC90B-216ENST00000529856 ENPP3O14638 875 aa14.14□□□□□ -0.15
CCDC90B-216ENST00000529856 RPS6KA5O75582 802 aa14.14□□□□□ -0.15
CCDC90B-216ENST00000529856 BMP15O95972 392 aa14.14□□□□□ -0.15
CCDC90B-216ENST00000529856 AMHP03971 560 aa14.14□□□□□ -0.15
CCDC90B-216ENST00000529856 PDIA4P13667 645 aaKnown RBP14.14□□□□□ -0.15
CCDC90B-216ENST00000529856 CCT6AP40227 531 aaKnown RBP14.14□□□□□ -0.15
CCDC90B-216ENST00000529856 ODR4Q5SWX8 454 aa14.14□□□□□ -0.15
CCDC90B-216ENST00000529856 ZNF697Q5TEC3 545 aa14.14□□□□□ -0.15
CCDC90B-216ENST00000529856 HAUS3Q68CZ6 603 aa14.14□□□□□ -0.15
CCDC90B-216ENST00000529856 TMCO2Q7Z6W1 182 aaPredicted RBP14.14□□□□□ -0.15
CCDC90B-216ENST00000529856 RTN4RL1Q86UN2 441 aaPredicted RBP14.14□□□□□ -0.15
CCDC90B-216ENST00000529856 DEFB123Q8N688 67 aa14.14□□□□□ -0.15
CCDC90B-216ENST00000529856 TOP1MTQ969P6 601 aa14.14□□□□□ -0.15
CCDC90B-216ENST00000529856 FTHL17Q9BXU8 183 aa14.14□□□□□ -0.15
CCDC90B-216ENST00000529856 SEMA6BQ9H3T3 888 aa14.14□□□□□ -0.15
CCDC90B-216ENST00000529856 ZSCAN16Q9H4T2 348 aaPredicted RBP14.14□□□□□ -0.15
CCDC90B-216ENST00000529856 ERVK-5Q9HDB9 667 aa14.14□□□□□ -0.15
CCDC90B-216ENST00000529856 DBR1Q9UK59 544 aaKnown RBP14.14□□□□□ -0.15
CCDC90B-216ENST00000529856 ST3GAL5Q9UNP4 418 aa14.14□□□□□ -0.15
CCDC90B-216ENST00000529856 YBX2Q9Y2T7 364 aaKnown RBP14.14□□□□□ -0.15
CCDC90B-216ENST00000529856 GPR182O15218 404 aa14.13□□□□□ -0.15
CCDC90B-216ENST00000529856 GAS2O43903 313 aaKnown RBP14.13□□□□□ -0.15
CCDC90B-216ENST00000529856 DGAT1O75907 488 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms