RNA–Protein interactions for RNA: ENST00000529828.5

PTPRC-213, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 2,336 nt, Biotype non stop decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-213ENST00000529828 CDHR5Q9HBB8 845 aa4.05□□□□□ -1.76
PTPRC-213ENST00000529828 ERAP1Q9NZ08 941 aa4.05□□□□□ -1.76
PTPRC-213ENST00000529828 RABGEF1Q9UJ41 708 aa4.05□□□□□ -1.76
PTPRC-213ENST00000529828 NOC2LQ9Y3T9 749 aaKnown RBP4.05□□□□□ -1.76
PTPRC-213ENST00000529828 LAMA4Q16363 1823 aa4.05□□□□□ -1.76
PTPRC-213ENST00000529828 IGSF9BQ9UPX0 1349 aa4.05□□□□□ -1.76
PTPRC-213ENST00000529828 PNMA6FA0A0J9YX94 578 aa4.05□□□□□ -1.76
PTPRC-213ENST00000529828 hCG_1642624A0A1W2PR95 340 aa4.05□□□□□ -1.76
PTPRC-213ENST00000529828 DENND3A2RUS2 1198 aa4.05□□□□□ -1.76
PTPRC-213ENST00000529828 FSCN2O14926 492 aa4.05□□□□□ -1.76
PTPRC-213ENST00000529828 PI15O43692 258 aa4.05□□□□□ -1.76
PTPRC-213ENST00000529828 NEFLP07196 543 aa4.05□□□□□ -1.76
PTPRC-213ENST00000529828 SRGAP2BP0DMP2 458 aa4.05□□□□□ -1.76
PTPRC-213ENST00000529828 ITGB5P18084 799 aa4.05□□□□□ -1.76
PTPRC-213ENST00000529828 PDE4AP27815 886 aa4.05□□□□□ -1.76
PTPRC-213ENST00000529828 SARSP49591 514 aaKnown RBP4.05□□□□□ -1.76
PTPRC-213ENST00000529828 FOSBP53539 338 aa4.05□□□□□ -1.76
PTPRC-213ENST00000529828 GRM4Q14833 912 aa4.05□□□□□ -1.76
PTPRC-213ENST00000529828 IMMTQ16891 758 aaKnown RBP4.05□□□□□ -1.76
PTPRC-213ENST00000529828 TMEM132AQ24JP5 1023 aa4.05□□□□□ -1.76
PTPRC-213ENST00000529828 RARS2Q5T160 578 aaKnown RBP4.05□□□□□ -1.76
PTPRC-213ENST00000529828 IER5Q5VY09 327 aa4.05□□□□□ -1.76
PTPRC-213ENST00000529828 CWF19L1Q69YN2 538 aaKnown RBP4.05□□□□□ -1.76
PTPRC-213ENST00000529828 B4GALNT3Q6L9W6 998 aa4.05□□□□□ -1.76
PTPRC-213ENST00000529828 TRMT1LQ7Z2T5 733 aaKnown RBP4.05□□□□□ -1.76
PTPRC-213ENST00000529828 NLRX1Q86UT6 975 aa4.05□□□□□ -1.76
PTPRC-213ENST00000529828 RNF169Q8NCN4 708 aa4.05□□□□□ -1.76
PTPRC-213ENST00000529828 KCNG4Q8TDN1 519 aa4.05□□□□□ -1.76
PTPRC-213ENST00000529828 TMEM40Q8WWA1 233 aa4.05□□□□□ -1.76
PTPRC-213ENST00000529828 AUTS2Q8WXX7 1259 aa4.05□□□□□ -1.76
PTPRC-213ENST00000529828 SEPT1Q8WYJ6 367 aa4.05□□□□□ -1.76
PTPRC-213ENST00000529828 ADAM2Q99965 735 aa4.05□□□□□ -1.76
PTPRC-213ENST00000529828 MYL10Q9BUA6 226 aa4.05□□□□□ -1.76
PTPRC-213ENST00000529828 FTHL17Q9BXU8 183 aa4.05□□□□□ -1.76
PTPRC-213ENST00000529828 CELF4Q9BZC1 486 aaKnown RBP4.05□□□□□ -1.76
PTPRC-213ENST00000529828 DIAPH3Q9NSV4 1193 aa4.05□□□□□ -1.76
PTPRC-213ENST00000529828 MAP3K20Q9NYL2 800 aaKnown RBP4.05□□□□□ -1.76
PTPRC-213ENST00000529828 LIMD1Q9UGP4 676 aa4.05□□□□□ -1.76
PTPRC-213ENST00000529828 SORCS3Q9UPU3 1222 aa4.05□□□□□ -1.76
PTPRC-213ENST00000529828 PCDHB7Q9Y5E2 793 aa4.05□□□□□ -1.76
PTPRC-213ENST00000529828 TAF6LQ9Y6J9 622 aa4.05□□□□□ -1.76
PTPRC-213ENST00000529828 CHD6Q8TD26 2715 aa4.04□□□□□ -1.76
PTPRC-213ENST00000529828 NT5C1B-RDH14C9J2C7 533 aa4.04□□□□□ -1.76
PTPRC-213ENST00000529828 DDX39AO00148 427 aaKnown RBP4.04□□□□□ -1.76
PTPRC-213ENST00000529828 IFIT3O14879 490 aaKnown RBP4.04□□□□□ -1.76
PTPRC-213ENST00000529828 RPS6KA5O75582 802 aa4.04□□□□□ -1.76
PTPRC-213ENST00000529828 STAM2O75886 525 aa4.04□□□□□ -1.76
PTPRC-213ENST00000529828 KRT37O76014 449 aa4.04□□□□□ -1.76
PTPRC-213ENST00000529828 MFAP1P55081 439 aaKnown RBP4.04□□□□□ -1.76
PTPRC-213ENST00000529828 KRT76Q01546 638 aa4.04□□□□□ -1.76
PTPRC-213ENST00000529828 UBE3AQ05086 875 aa4.04□□□□□ -1.76
PTPRC-213ENST00000529828 KCNC3Q14003 757 aa4.04□□□□□ -1.76
PTPRC-213ENST00000529828 KIZQ2M2Z5 673 aa4.04□□□□□ -1.76
PTPRC-213ENST00000529828 PCNX4Q63HM2 1172 aa4.04□□□□□ -1.76
PTPRC-213ENST00000529828 ERMP1Q7Z2K6 904 aa4.04□□□□□ -1.76
PTPRC-213ENST00000529828 TMC7Q7Z402 723 aa4.04□□□□□ -1.76
PTPRC-213ENST00000529828 RAB11FIP4Q86YS3 637 aa4.04□□□□□ -1.76
PTPRC-213ENST00000529828 KIAA2013Q8IYS2 634 aa4.04□□□□□ -1.76
PTPRC-213ENST00000529828 CMTR1Q8N1G2 835 aaKnown RBP4.04□□□□□ -1.76
PTPRC-213ENST00000529828 TDRD5Q8NAT2 981 aaKnown RBP4.04□□□□□ -1.76
PTPRC-213ENST00000529828 RIN2Q8WYP3 895 aaPredicted RBP4.04□□□□□ -1.76
PTPRC-213ENST00000529828 MRPS27Q92552 414 aaKnown RBP4.04□□□□□ -1.76
PTPRC-213ENST00000529828 CUL5Q93034 780 aa4.04□□□□□ -1.76
PTPRC-213ENST00000529828 RMDN1Q96DB5 314 aa4.04□□□□□ -1.76
PTPRC-213ENST00000529828 PGBD1Q96JS3 809 aa4.04□□□□□ -1.76
PTPRC-213ENST00000529828 ZNF668Q96K58 619 aaPredicted RBP4.04□□□□□ -1.76
PTPRC-213ENST00000529828 CDCA3Q99618 268 aaPredicted RBP4.04□□□□□ -1.76
PTPRC-213ENST00000529828 SENP7Q9BQF6 1050 aa4.04□□□□□ -1.76
PTPRC-213ENST00000529828 KRT23Q9C075 422 aa4.04□□□□□ -1.76
PTPRC-213ENST00000529828 SMARCAD1Q9H4L7 1026 aa4.04□□□□□ -1.76
PTPRC-213ENST00000529828 RIOX1Q9H6W3 641 aa4.04□□□□□ -1.76
PTPRC-213ENST00000529828 CWH43Q9H720 699 aa4.04□□□□□ -1.76
PTPRC-213ENST00000529828 ERVK-5Q9HDB9 667 aa4.04□□□□□ -1.76
PTPRC-213ENST00000529828 AAASQ9NRG9 546 aa4.04□□□□□ -1.76
PTPRC-213ENST00000529828 ST3GAL5Q9UNP4 418 aa4.04□□□□□ -1.76
PTPRC-213ENST00000529828 NR2E1Q9Y466 385 aa4.04□□□□□ -1.76
PTPRC-213ENST00000529828 HCFC2Q9Y5Z7 792 aa4.04□□□□□ -1.76
PTPRC-213ENST00000529828 R4GN57 208 aa4.04□□□□□ -1.76
PTPRC-213ENST00000529828 KMT2BQ9UMN6 2715 aaPredicted RBP4.04□□□□□ -1.76
PTPRC-213ENST00000529828 MEIS2O14770 477 aa4.04□□□□□ -1.76
PTPRC-213ENST00000529828 PLEKHA8P1O95397 391 aa4.04□□□□□ -1.76
PTPRC-213ENST00000529828 CENPBP07199 599 aaPredicted RBP4.04□□□□□ -1.76
PTPRC-213ENST00000529828 EPCAMP16422 314 aa4.04□□□□□ -1.76
PTPRC-213ENST00000529828 RXRAP19793 462 aa4.04□□□□□ -1.76
PTPRC-213ENST00000529828 MTMR1Q13613 665 aa4.04□□□□□ -1.76
PTPRC-213ENST00000529828 MCTP2Q6DN12 878 aa4.04□□□□□ -1.76
PTPRC-213ENST00000529828 MTHFD1LQ6UB35 978 aa4.04□□□□□ -1.76
PTPRC-213ENST00000529828 TMC5Q6UXY8 1006 aa4.04□□□□□ -1.76
PTPRC-213ENST00000529828 LRRC55Q6ZSA7 311 aa4.04□□□□□ -1.76
PTPRC-213ENST00000529828 FAM228AQ86W67 206 aa4.04□□□□□ -1.76
PTPRC-213ENST00000529828 UBALD2Q8IYN6 164 aa4.04□□□□□ -1.76
PTPRC-213ENST00000529828 GIMAP8Q8ND71 665 aaPredicted RBP4.04□□□□□ -1.76
PTPRC-213ENST00000529828 OXER1Q8TDS5 423 aa4.04□□□□□ -1.76
PTPRC-213ENST00000529828 ZDHHC16Q969W1 377 aa4.04□□□□□ -1.76
PTPRC-213ENST00000529828 GPRASP2Q96D09 838 aa4.04□□□□□ -1.76
PTPRC-213ENST00000529828 OSMRQ99650 979 aa4.04□□□□□ -1.76
PTPRC-213ENST00000529828 HINFPQ9BQA5 517 aa4.04□□□□□ -1.76
PTPRC-213ENST00000529828 AZI2Q9H6S1 392 aa4.04□□□□□ -1.76
PTPRC-213ENST00000529828 CNNM2Q9H8M5 875 aa4.04□□□□□ -1.76
PTPRC-213ENST00000529828 ATP6V0A4Q9HBG4 840 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms