RNA–Protein interactions for RNA: ENST00000529553.1

AMBRA1-207, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-207ENST00000529553 DSC3Q14574 896 aa13.33□□□□□ -0.28
AMBRA1-207ENST00000529553 NONOQ15233 471 aaKnown RBP eCLIP13.33□□□□□ -0.28
AMBRA1-207ENST00000529553 IMMTQ16891 758 aaKnown RBP13.33□□□□□ -0.28
AMBRA1-207ENST00000529553 KIAA0319Q5VV43 1072 aa13.33□□□□□ -0.28
AMBRA1-207ENST00000529553 GPR149Q86SP6 731 aa13.33□□□□□ -0.28
AMBRA1-207ENST00000529553 PPFIBP1Q86W92 1011 aa13.33□□□□□ -0.28
AMBRA1-207ENST00000529553 KIAA0319LQ8IZA0 1049 aa13.33□□□□□ -0.28
AMBRA1-207ENST00000529553 SLC39A11Q8N1S5 342 aa13.33□□□□□ -0.28
AMBRA1-207ENST00000529553 C12orf76Q8N812 135 aaPredicted RBP13.33□□□□□ -0.28
AMBRA1-207ENST00000529553 TMEM87AQ8NBN3 555 aa13.33□□□□□ -0.28
AMBRA1-207ENST00000529553 SLC22A17Q8WUG5 538 aa13.33□□□□□ -0.28
AMBRA1-207ENST00000529553 CDHR5Q9HBB8 845 aa13.33□□□□□ -0.28
AMBRA1-207ENST00000529553 JADE2Q9NQC1 790 aa13.33□□□□□ -0.28
AMBRA1-207ENST00000529553 UBIAD1Q9Y5Z9 338 aa13.33□□□□□ -0.28
AMBRA1-207ENST00000529553 ACACBO00763 2458 aa13.32□□□□□ -0.28
AMBRA1-207ENST00000529553 SP9P0CG40 484 aa13.32□□□□□ -0.28
AMBRA1-207ENST00000529553 ARP10275 920 aa13.32□□□□□ -0.28
AMBRA1-207ENST00000529553 ALDH7A1P49419 539 aaKnown RBP13.32□□□□□ -0.28
AMBRA1-207ENST00000529553 POLGP54098 1239 aaPredicted RBP13.32□□□□□ -0.28
AMBRA1-207ENST00000529553 PHLDB3Q6NSJ2 640 aa13.32□□□□□ -0.28
AMBRA1-207ENST00000529553 USP17L6PQ6QN14 398 aa13.32□□□□□ -0.28
AMBRA1-207ENST00000529553 CCDC149Q6ZUS6 474 aa13.32□□□□□ -0.28
AMBRA1-207ENST00000529553 CABP7Q86V35 215 aa13.32□□□□□ -0.28
AMBRA1-207ENST00000529553 ABI1Q8IZP0 508 aa13.32□□□□□ -0.28
AMBRA1-207ENST00000529553 SUMF1Q8NBK3 374 aa13.32□□□□□ -0.28
AMBRA1-207ENST00000529553 TMEM40Q8WWA1 233 aa13.32□□□□□ -0.28
AMBRA1-207ENST00000529553 RSPH1Q8WYR4 309 aa13.32□□□□□ -0.28
AMBRA1-207ENST00000529553 NXPE3Q969Y0 559 aa13.32□□□□□ -0.28
AMBRA1-207ENST00000529553 JPH1Q9HDC5 661 aaPredicted RBP13.32□□□□□ -0.28
AMBRA1-207ENST00000529553 SLC9A2Q9UBY0 812 aa13.32□□□□□ -0.28
AMBRA1-207ENST00000529553 RCAN3Q9UKA8 241 aa13.32□□□□□ -0.28
AMBRA1-207ENST00000529553 FRYLO94915 3013 aa13.31□□□□□ -0.28
AMBRA1-207ENST00000529553 PRR5-ARHGAP8B1AHC4 643 aa13.31□□□□□ -0.28
AMBRA1-207ENST00000529553 HBP1O60381 514 aa13.31□□□□□ -0.28
AMBRA1-207ENST00000529553 ARHGAP8P85298 464 aa13.31□□□□□ -0.28
AMBRA1-207ENST00000529553 C1orf210Q8IVY1 113 aa13.31□□□□□ -0.28
AMBRA1-207ENST00000529553 ZNF710Q8N1W2 664 aa13.31□□□□□ -0.28
AMBRA1-207ENST00000529553 DCLK2Q8N568 766 aa13.31□□□□□ -0.28
AMBRA1-207ENST00000529553 TRAPPC12Q8WVT3 735 aa13.31□□□□□ -0.28
AMBRA1-207ENST00000529553 DSCC1Q9BVC3 393 aa13.31□□□□□ -0.28
AMBRA1-207ENST00000529553 SFXN1Q9H9B4 322 aa13.31□□□□□ -0.28
AMBRA1-207ENST00000529553 RNF19AQ9NV58 838 aa13.31□□□□□ -0.28
AMBRA1-207ENST00000529553 GINS2Q9Y248 185 aa13.31□□□□□ -0.28
AMBRA1-207ENST00000529553 CEP250Q9BV73 2442 aa13.3□□□□□ -0.28
AMBRA1-207ENST00000529553 KRBA1A5PL33 1030 aa13.3□□□□□ -0.28
AMBRA1-207ENST00000529553 ATG7O95352 703 aa13.3□□□□□ -0.28
AMBRA1-207ENST00000529553 EPCAMP16422 314 aa13.3□□□□□ -0.28
AMBRA1-207ENST00000529553 ZSCAN20P17040 1043 aaPredicted RBP13.3□□□□□ -0.28
AMBRA1-207ENST00000529553 SDSP20132 328 aa13.3□□□□□ -0.28
AMBRA1-207ENST00000529553 RFX1P22670 979 aa13.3□□□□□ -0.28
AMBRA1-207ENST00000529553 SMARCA1P28370 1054 aa13.3□□□□□ -0.28
AMBRA1-207ENST00000529553 PBX3P40426 434 aa13.3□□□□□ -0.28
AMBRA1-207ENST00000529553 ATXN1P54253 815 aaKnown RBP13.3□□□□□ -0.28
AMBRA1-207ENST00000529553 TROAPQ12815 778 aa13.3□□□□□ -0.28
AMBRA1-207ENST00000529553 ST3GAL2Q16842 350 aa13.3□□□□□ -0.28
AMBRA1-207ENST00000529553 ZNF528Q3MIS6 628 aa13.3□□□□□ -0.28
AMBRA1-207ENST00000529553 ZNF484Q5JVG2 852 aa13.3□□□□□ -0.28
AMBRA1-207ENST00000529553 KANK3Q6NY19 840 aa13.3□□□□□ -0.28
AMBRA1-207ENST00000529553 TMC5Q6UXY8 1006 aa13.3□□□□□ -0.28
AMBRA1-207ENST00000529553 CYP26C1Q6V0L0 522 aa13.3□□□□□ -0.28
AMBRA1-207ENST00000529553 C15orf39Q6ZRI6 1047 aa13.3□□□□□ -0.28
AMBRA1-207ENST00000529553 FAM228AQ86W67 206 aa13.3□□□□□ -0.28
AMBRA1-207ENST00000529553 VPS52Q8N1B4 723 aa13.3□□□□□ -0.28
AMBRA1-207ENST00000529553 RIN2Q8WYP3 895 aaPredicted RBP13.3□□□□□ -0.28
AMBRA1-207ENST00000529553 TMEM169Q96HH4 297 aa13.3□□□□□ -0.28
AMBRA1-207ENST00000529553 DLGAP2Q9P1A6 1054 aa13.3□□□□□ -0.28
AMBRA1-207ENST00000529553 STK39Q9UEW8 545 aa13.3□□□□□ -0.28
AMBRA1-207ENST00000529553 SIT1Q9Y3P8 196 aa13.3□□□□□ -0.28
AMBRA1-207ENST00000529553 MYH6P13533 1939 aa13.3□□□□□ -0.28
AMBRA1-207ENST00000529553 NFASCO94856 1347 aa13.3□□□□□ -0.28
AMBRA1-207ENST00000529553 COL1A2P08123 1366 aa13.3□□□□□ -0.28
AMBRA1-207ENST00000529553 FNDC1Q4ZHG4 1894 aaPredicted RBP13.29□□□□□ -0.28
AMBRA1-207ENST00000529553 OTOGLQ3ZCN5 2332 aa13.29□□□□□ -0.28
AMBRA1-207ENST00000529553 IGKV6D-21A0A0A0MT36 114 aa13.29□□□□□ -0.28
AMBRA1-207ENST00000529553 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.29□□□□□ -0.28
AMBRA1-207ENST00000529553 KINO60870 393 aaKnown RBP13.29□□□□□ -0.28
AMBRA1-207ENST00000529553 CTSAP10619 480 aa13.29□□□□□ -0.28
AMBRA1-207ENST00000529553 ACTR2P61160 394 aa13.29□□□□□ -0.28
AMBRA1-207ENST00000529553 LETM2Q2VYF4 491 aa13.29□□□□□ -0.28
AMBRA1-207ENST00000529553 ANKRD45Q5TZF3 282 aa13.29□□□□□ -0.28
AMBRA1-207ENST00000529553 DDX53Q86TM3 631 aaKnown RBP13.29□□□□□ -0.28
AMBRA1-207ENST00000529553 ECHDC2Q86YB7 292 aa13.29□□□□□ -0.28
AMBRA1-207ENST00000529553 SDF4Q9BRK5 362 aa13.29□□□□□ -0.28
AMBRA1-207ENST00000529553 MRPL9Q9BYD2 267 aaKnown RBP13.29□□□□□ -0.28
AMBRA1-207ENST00000529553 RHOBTB2Q9BYZ6 727 aa13.29□□□□□ -0.28
AMBRA1-207ENST00000529553 ZBP1Q9H171 429 aa13.29□□□□□ -0.28
AMBRA1-207ENST00000529553 PSTPIP2Q9H939 334 aa13.29□□□□□ -0.28
AMBRA1-207ENST00000529553 PCDHB15Q9Y5E8 787 aa13.29□□□□□ -0.28
AMBRA1-207ENST00000529553 A0A0U1RQF3 1178 aa13.28□□□□□ -0.28
AMBRA1-207ENST00000529553 GPR32O75388 356 aa13.28□□□□□ -0.28
AMBRA1-207ENST00000529553 CFHP08603 1231 aa13.28□□□□□ -0.28
AMBRA1-207ENST00000529553 SRFP11831 508 aa13.28□□□□□ -0.28
AMBRA1-207ENST00000529553 CA8P35219 290 aa13.28□□□□□ -0.28
AMBRA1-207ENST00000529553 BCAR1P56945 870 aa13.28□□□□□ -0.28
AMBRA1-207ENST00000529553 KIZQ2M2Z5 673 aa13.28□□□□□ -0.28
AMBRA1-207ENST00000529553 VARS2Q5ST30 1063 aaKnown RBP13.28□□□□□ -0.28
AMBRA1-207ENST00000529553 SLC44A3Q8N4M1 653 aa13.28□□□□□ -0.28
AMBRA1-207ENST00000529553 RRP36Q96EU6 259 aaKnown RBP13.28□□□□□ -0.28
AMBRA1-207ENST00000529553 MAP3K14Q99558 947 aa13.28□□□□□ -0.28
AMBRA1-207ENST00000529553 RTKNQ9BST9 563 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms