RNA–Protein interactions for RNA: ENST00000529476.1

USF1-209, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-209ENST00000529476 SLC26A4O43511 780 aa15.62■□□□□ 0.09
USF1-209ENST00000529476 PLCG1P19174 1290 aa15.62■□□□□ 0.09
USF1-209ENST00000529476 TXLNAP40222 546 aa15.62■□□□□ 0.09
USF1-209ENST00000529476 TBC1D8BQ0IIM8 1120 aa15.62■□□□□ 0.09
USF1-209ENST00000529476 TRIM71Q2Q1W2 868 aaKnown RBP15.62■□□□□ 0.09
USF1-209ENST00000529476 LRRC15Q8TF66 581 aa15.62■□□□□ 0.09
USF1-209ENST00000529476 NOC4LQ9BVI4 516 aaKnown RBP15.62■□□□□ 0.09
USF1-209ENST00000529476 NT5C3AQ9H0P0 336 aa15.62■□□□□ 0.09
USF1-209ENST00000529476 FAM49AQ9H0Q0 323 aaPredicted RBP15.62■□□□□ 0.09
USF1-209ENST00000529476 BMP2KQ9NSY1 1161 aaPredicted RBP15.62■□□□□ 0.09
USF1-209ENST00000529476 DNM3Q9UQ16 869 aa15.62■□□□□ 0.09
USF1-209ENST00000529476 A0A087X0B3 334 aa15.61■□□□□ 0.09
USF1-209ENST00000529476 KIAA0355O15063 1070 aa15.61■□□□□ 0.09
USF1-209ENST00000529476 MAGEB2O15479 319 aa15.61■□□□□ 0.09
USF1-209ENST00000529476 EYA4O95677 639 aa15.61■□□□□ 0.09
USF1-209ENST00000529476 CLCN3P51790 818 aa15.61■□□□□ 0.09
USF1-209ENST00000529476 TPRNQ4KMQ1 711 aa15.61■□□□□ 0.09
USF1-209ENST00000529476 RESP18Q5W5W9 173 aa15.61■□□□□ 0.09
USF1-209ENST00000529476 FAM109BQ6ICB4 259 aaPredicted RBP15.61■□□□□ 0.09
USF1-209ENST00000529476 EFCAB12Q6NXP0 572 aa15.61■□□□□ 0.09
USF1-209ENST00000529476 TAF2Q6P1X5 1199 aa15.61■□□□□ 0.09
USF1-209ENST00000529476 LRRC71Q8N4P6 559 aa15.61■□□□□ 0.09
USF1-209ENST00000529476 METTL13Q8N6R0 699 aa15.61■□□□□ 0.09
USF1-209ENST00000529476 DNAJB3Q8WWF6 145 aa15.61■□□□□ 0.09
USF1-209ENST00000529476 CCDC43Q96MW1 224 aaKnown RBP15.61■□□□□ 0.09
USF1-209ENST00000529476 PANK2Q9BZ23 570 aa15.61■□□□□ 0.09
USF1-209ENST00000529476 PPP1R12CQ9BZL4 782 aa15.61■□□□□ 0.09
USF1-209ENST00000529476 BHMT2Q9H2M3 363 aa15.61■□□□□ 0.09
USF1-209ENST00000529476 HIPK3Q9H422 1215 aa15.61■□□□□ 0.09
USF1-209ENST00000529476 SUGCTQ9HAC7 445 aa15.61■□□□□ 0.09
USF1-209ENST00000529476 CCDC39Q9UFE4 941 aa15.61■□□□□ 0.09
USF1-209ENST00000529476 UMODL1Q5DID0 1318 aa15.61■□□□□ 0.09
USF1-209ENST00000529476 LTBP2Q14767 1821 aa15.61■□□□□ 0.09
USF1-209ENST00000529476 IGKV6-21A0A0C4DH24 114 aa15.6■□□□□ 0.09
USF1-209ENST00000529476 SMIM35A0A1B0GVV1 85 aa15.6■□□□□ 0.09
USF1-209ENST00000529476 ARHGEF35A5YM69 484 aa15.6■□□□□ 0.09
USF1-209ENST00000529476 USO1O60763 962 aaKnown RBP15.6■□□□□ 0.09
USF1-209ENST00000529476 MAFO75444 373 aaPredicted RBP15.6■□□□□ 0.09
USF1-209ENST00000529476 ITGB8P26012 769 aa15.6■□□□□ 0.09
USF1-209ENST00000529476 CYP2C18P33260 490 aa15.6■□□□□ 0.09
USF1-209ENST00000529476 THPOP40225 353 aa15.6■□□□□ 0.09
USF1-209ENST00000529476 RFC5P40937 340 aa15.6■□□□□ 0.09
USF1-209ENST00000529476 POLGP54098 1239 aaPredicted RBP15.6■□□□□ 0.09
USF1-209ENST00000529476 MKRN4PQ13434 485 aaPredicted RBP15.6■□□□□ 0.09
USF1-209ENST00000529476 DRP2Q13474 957 aa15.6■□□□□ 0.09
USF1-209ENST00000529476 EMC2Q15006 297 aa15.6■□□□□ 0.09
USF1-209ENST00000529476 RRAGBQ5VZM2 374 aa15.6■□□□□ 0.09
USF1-209ENST00000529476 ADALQ6DHV7 355 aa15.6■□□□□ 0.09
USF1-209ENST00000529476 KIAA0319LQ8IZA0 1049 aa15.6■□□□□ 0.09
USF1-209ENST00000529476 LINC01465Q8N7H1 131 aa15.6■□□□□ 0.09
USF1-209ENST00000529476 PDILTQ8N807 584 aa15.6■□□□□ 0.09
USF1-209ENST00000529476 RETREG2Q8NC44 543 aa15.6■□□□□ 0.09
USF1-209ENST00000529476 SLC7A3Q8WY07 619 aa15.6■□□□□ 0.09
USF1-209ENST00000529476 DHX33Q9H6R0 707 aaKnown RBP15.6■□□□□ 0.09
USF1-209ENST00000529476 BLOC1S4Q9NUP1 217 aa15.6■□□□□ 0.09
USF1-209ENST00000529476 PRKAG2Q9UGJ0 569 aa15.6■□□□□ 0.09
USF1-209ENST00000529476 PPME1Q9Y570 386 aa15.6■□□□□ 0.09
USF1-209ENST00000529476 TANC1Q9C0D5 1861 aa15.6■□□□□ 0.09
USF1-209ENST00000529476 SPTBN5Q9NRC6 3674 aaKnown RBP15.6■□□□□ 0.09
USF1-209ENST00000529476 SIP14410 1827 aa15.59■□□□□ 0.09
USF1-209ENST00000529476 RBAK-RBAKDNI3L0D1 243 aa15.59■□□□□ 0.09
USF1-209ENST00000529476 SSBP05455 408 aaKnown RBP eCLIP15.59■□□□□ 0.09
USF1-209ENST00000529476 CKBP12277 381 aa15.59■□□□□ 0.09
USF1-209ENST00000529476 RAG1P15918 1043 aa15.59■□□□□ 0.09
USF1-209ENST00000529476 MDM2Q00987 491 aaPredicted RBP15.59■□□□□ 0.09
USF1-209ENST00000529476 RBL2Q08999 1139 aa15.59■□□□□ 0.09
USF1-209ENST00000529476 BFSP2Q13515 415 aa15.59■□□□□ 0.09
USF1-209ENST00000529476 ZNF618Q5T7W0 954 aa15.59■□□□□ 0.09
USF1-209ENST00000529476 PADI6Q6TGC4 694 aa15.59■□□□□ 0.09
USF1-209ENST00000529476 KCTD17Q8N5Z5 321 aa15.59■□□□□ 0.09
USF1-209ENST00000529476 CCDC155Q8N6L0 562 aa15.59■□□□□ 0.09
USF1-209ENST00000529476 CAGE1Q8TC20 777 aa15.59■□□□□ 0.09
USF1-209ENST00000529476 RAD54LQ92698 747 aa15.59■□□□□ 0.09
USF1-209ENST00000529476 XPNPEP1Q9NQW7 623 aa15.59■□□□□ 0.09
USF1-209ENST00000529476 FAM13BQ9NYF5 915 aa15.59■□□□□ 0.09
USF1-209ENST00000529476 SCN5AQ14524 2016 aa15.58■□□□□ 0.09
USF1-209ENST00000529476 PITPNM1O00562 1244 aa15.58■□□□□ 0.08
USF1-209ENST00000529476 DGAT1O75907 488 aa15.58■□□□□ 0.08
USF1-209ENST00000529476 TIMP1P01033 207 aa15.58■□□□□ 0.08
USF1-209ENST00000529476 VTNP04004 478 aa15.58■□□□□ 0.08
USF1-209ENST00000529476 CTSHP09668 335 aa15.58■□□□□ 0.08
USF1-209ENST00000529476 PLA2G4BP0C869 781 aa15.58■□□□□ 0.08
USF1-209ENST00000529476 CMA1P23946 247 aa15.58■□□□□ 0.08
USF1-209ENST00000529476 TMOD1P28289 359 aa15.58■□□□□ 0.08
USF1-209ENST00000529476 STAT6P42226 847 aa15.58■□□□□ 0.08
USF1-209ENST00000529476 CCL23P55773 120 aa15.58■□□□□ 0.08
USF1-209ENST00000529476 TMEM62Q0P6H9 643 aa15.58■□□□□ 0.08
USF1-209ENST00000529476 DHX8Q14562 1220 aaKnown RBP15.58■□□□□ 0.08
USF1-209ENST00000529476 MCM6Q14566 821 aa15.58■□□□□ 0.08
USF1-209ENST00000529476 NAALADL2Q58DX5 795 aa15.58■□□□□ 0.08
USF1-209ENST00000529476 TRAF7Q6Q0C0 670 aa15.58■□□□□ 0.08
USF1-209ENST00000529476 CCDC73Q6ZRK6 1079 aa15.58■□□□□ 0.08
USF1-209ENST00000529476 RPAINQ86UA6 219 aa15.58■□□□□ 0.08
USF1-209ENST00000529476 RSPH3Q86UC2 560 aa15.58■□□□□ 0.08
USF1-209ENST00000529476 TMEM143Q96AN5 459 aa15.58■□□□□ 0.08
USF1-209ENST00000529476 PPP1R16BQ96T49 567 aa15.58■□□□□ 0.08
USF1-209ENST00000529476 MTRQ99707 1265 aa15.58■□□□□ 0.08
USF1-209ENST00000529476 JPH2Q9BR39 696 aaPredicted RBP15.58■□□□□ 0.08
USF1-209ENST00000529476 RUSC1Q9BVN2 902 aa15.58■□□□□ 0.08
USF1-209ENST00000529476 WNT8AQ9H1J5 351 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms