RNA–Protein interactions for RNA: ENST00000529472.1

CHD7-209, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 3

Gene CHD7, Length 788 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-209ENST00000529472 PPP1R12CQ9BZL4 782 aa12.71□□□□□ -0.37
CHD7-209ENST00000529472 HIPK3Q9H422 1215 aa12.71□□□□□ -0.37
CHD7-209ENST00000529472 TBX21Q9UL17 535 aa12.71□□□□□ -0.37
CHD7-209ENST00000529472 PPME1Q9Y570 386 aa12.71□□□□□ -0.37
CHD7-209ENST00000529472 PCDHA2Q9Y5H9 948 aa12.71□□□□□ -0.37
CHD7-209ENST00000529472 RANBP2P49792 3224 aaKnown RBP12.71□□□□□ -0.38
CHD7-209ENST00000529472 TRIM43BA6NCK2 446 aa12.7□□□□□ -0.38
CHD7-209ENST00000529472 POLR2DO15514 142 aaKnown RBP12.7□□□□□ -0.38
CHD7-209ENST00000529472 MAFO75444 373 aaPredicted RBP12.7□□□□□ -0.38
CHD7-209ENST00000529472 CTSHP09668 335 aa12.7□□□□□ -0.38
CHD7-209ENST00000529472 PFKFB1P16118 471 aa12.7□□□□□ -0.38
CHD7-209ENST00000529472 CMA1P23946 247 aa12.7□□□□□ -0.38
CHD7-209ENST00000529472 RGS19P49795 217 aa12.7□□□□□ -0.38
CHD7-209ENST00000529472 TMEM62Q0P6H9 643 aa12.7□□□□□ -0.38
CHD7-209ENST00000529472 DRP2Q13474 957 aa12.7□□□□□ -0.38
CHD7-209ENST00000529472 PADI6Q6TGC4 694 aa12.7□□□□□ -0.38
CHD7-209ENST00000529472 MAEAQ7L5Y9 396 aa12.7□□□□□ -0.38
CHD7-209ENST00000529472 CCDC155Q8N6L0 562 aa12.7□□□□□ -0.38
CHD7-209ENST00000529472 MRPS27Q92552 414 aaKnown RBP12.7□□□□□ -0.38
CHD7-209ENST00000529472 RAD54LQ92698 747 aa12.7□□□□□ -0.38
CHD7-209ENST00000529472 TMEM143Q96AN5 459 aa12.7□□□□□ -0.38
CHD7-209ENST00000529472 TRIM43Q96BQ3 446 aaPredicted RBP12.7□□□□□ -0.38
CHD7-209ENST00000529472 PPP1R16BQ96T49 567 aa12.7□□□□□ -0.38
CHD7-209ENST00000529472 MTRQ99707 1265 aa12.7□□□□□ -0.38
CHD7-209ENST00000529472 JPH2Q9BR39 696 aaPredicted RBP12.7□□□□□ -0.38
CHD7-209ENST00000529472 NOC4LQ9BVI4 516 aaKnown RBP12.7□□□□□ -0.38
CHD7-209ENST00000529472 RUSC1Q9BVN2 902 aa12.7□□□□□ -0.38
CHD7-209ENST00000529472 DHX33Q9H6R0 707 aaKnown RBP12.7□□□□□ -0.38
CHD7-209ENST00000529472 ATP6V0A4Q9HBG4 840 aa12.7□□□□□ -0.38
CHD7-209ENST00000529472 BLOC1S4Q9NUP1 217 aa12.7□□□□□ -0.38
CHD7-209ENST00000529472 PRKAG2Q9UGJ0 569 aa12.7□□□□□ -0.38
CHD7-209ENST00000529472 KCNH3Q9ULD8 1083 aa12.7□□□□□ -0.38
CHD7-209ENST00000529472 ZMYND8Q9ULU4 1186 aaPredicted RBP12.7□□□□□ -0.38
CHD7-209ENST00000529472 AKT3Q9Y243 479 aa12.7□□□□□ -0.38
CHD7-209ENST00000529472 UMODL1Q5DID0 1318 aa12.69□□□□□ -0.38
CHD7-209ENST00000529472 SMIM35A0A1B0GVV1 85 aa12.69□□□□□ -0.38
CHD7-209ENST00000529472 A0A1W2PQ27 194 aa12.69□□□□□ -0.38
CHD7-209ENST00000529472 A0A1W2PQ64 194 aa12.69□□□□□ -0.38
CHD7-209ENST00000529472 A0A1W2PQD8 194 aa12.69□□□□□ -0.38
CHD7-209ENST00000529472 KIAA0355O15063 1070 aa12.69□□□□□ -0.38
CHD7-209ENST00000529472 DGAT1O75907 488 aa12.69□□□□□ -0.38
CHD7-209ENST00000529472 VTNP04004 478 aa12.69□□□□□ -0.38
CHD7-209ENST00000529472 CKBP12277 381 aa12.69□□□□□ -0.38
CHD7-209ENST00000529472 SYN1P17600 705 aa12.69□□□□□ -0.38
CHD7-209ENST00000529472 TMOD1P28289 359 aa12.69□□□□□ -0.38
CHD7-209ENST00000529472 CYP2C18P33260 490 aa12.69□□□□□ -0.38
CHD7-209ENST00000529472 NDUFA8P51970 172 aa12.69□□□□□ -0.38
CHD7-209ENST00000529472 SLC12A3P55017 1021 aa12.69□□□□□ -0.38
CHD7-209ENST00000529472 BFSP2Q13515 415 aa12.69□□□□□ -0.38
CHD7-209ENST00000529472 MCM6Q14566 821 aa12.69□□□□□ -0.38
CHD7-209ENST00000529472 TRIM71Q2Q1W2 868 aaKnown RBP12.69□□□□□ -0.38
CHD7-209ENST00000529472 NAALADL2Q58DX5 795 aa12.69□□□□□ -0.38
CHD7-209ENST00000529472 RSPH3Q86UC2 560 aa12.69□□□□□ -0.38
CHD7-209ENST00000529472 EXOC8Q8IYI6 725 aa12.69□□□□□ -0.38
CHD7-209ENST00000529472 KIAA0319LQ8IZA0 1049 aa12.69□□□□□ -0.38
CHD7-209ENST00000529472 TMEM87AQ8NBN3 555 aa12.69□□□□□ -0.38
CHD7-209ENST00000529472 CAGE1Q8TC20 777 aa12.69□□□□□ -0.38
CHD7-209ENST00000529472 LARP4BQ92615 738 aaKnown RBP12.69□□□□□ -0.38
CHD7-209ENST00000529472 GBP4Q96PP9 640 aa12.69□□□□□ -0.38
CHD7-209ENST00000529472 MAP7D2Q96T17 732 aa12.69□□□□□ -0.38
CHD7-209ENST00000529472 GOLPH3LQ9H4A5 285 aa12.69□□□□□ -0.38
CHD7-209ENST00000529472 STK17AQ9UEE5 414 aa12.69□□□□□ -0.38
CHD7-209ENST00000529472 TANC1Q9C0D5 1861 aa12.69□□□□□ -0.38
CHD7-209ENST00000529472 IGKV6-21A0A0C4DH24 114 aa12.68□□□□□ -0.38
CHD7-209ENST00000529472 RBAK-RBAKDNI3L0D1 243 aa12.68□□□□□ -0.38
CHD7-209ENST00000529472 GADD45BO75293 160 aaPredicted RBP12.68□□□□□ -0.38
CHD7-209ENST00000529472 PRPF40AO75400 957 aaKnown RBP12.68□□□□□ -0.38
CHD7-209ENST00000529472 RAG1P15918 1043 aa12.68□□□□□ -0.38
CHD7-209ENST00000529472 DNM2P50570 870 aa12.68□□□□□ -0.38
CHD7-209ENST00000529472 CCL23P55773 120 aa12.68□□□□□ -0.38
CHD7-209ENST00000529472 RAD51AP2Q09MP3 1159 aa12.68□□□□□ -0.38
CHD7-209ENST00000529472 MKRN4PQ13434 485 aaPredicted RBP12.68□□□□□ -0.38
CHD7-209ENST00000529472 E2F4Q16254 413 aa12.68□□□□□ -0.38
CHD7-209ENST00000529472 ZNF618Q5T7W0 954 aa12.68□□□□□ -0.38
CHD7-209ENST00000529472 FAM102BQ5T8I3 360 aa12.68□□□□□ -0.38
CHD7-209ENST00000529472 LRRC8DQ7L1W4 858 aa12.68□□□□□ -0.38
CHD7-209ENST00000529472 GPBP1Q86WP2 473 aa12.68□□□□□ -0.38
CHD7-209ENST00000529472 KCTD17Q8N5Z5 321 aa12.68□□□□□ -0.38
CHD7-209ENST00000529472 LINC01465Q8N7H1 131 aa12.68□□□□□ -0.38
CHD7-209ENST00000529472 SYT2Q8N9I0 419 aaPredicted RBP12.68□□□□□ -0.38
CHD7-209ENST00000529472 IQUBQ8NA54 791 aa12.68□□□□□ -0.38
CHD7-209ENST00000529472 ZNF668Q96K58 619 aaPredicted RBP12.68□□□□□ -0.38
CHD7-209ENST00000529472 GPRC5CQ9NQ84 441 aa12.68□□□□□ -0.38
CHD7-209ENST00000529472 XPNPEP1Q9NQW7 623 aa12.68□□□□□ -0.38
CHD7-209ENST00000529472 SUCLA2Q9P2R7 463 aaPredicted RBP12.68□□□□□ -0.38
CHD7-209ENST00000529472 GINS2Q9Y248 185 aa12.68□□□□□ -0.38
CHD7-209ENST00000529472 HPSEQ9Y251 543 aa12.68□□□□□ -0.38
CHD7-209ENST00000529472 SIP14410 1827 aa12.67□□□□□ -0.38
CHD7-209ENST00000529472 LTBP2Q14767 1821 aa12.67□□□□□ -0.38
CHD7-209ENST00000529472 NPHP3-ACAD11A0A0J9YXS1 232 aa12.67□□□□□ -0.38
CHD7-209ENST00000529472 M0QZ92 97 aa12.67□□□□□ -0.38
CHD7-209ENST00000529472 PITPNM1O00562 1244 aa12.67□□□□□ -0.38
CHD7-209ENST00000529472 GAS2O43903 313 aaKnown RBP12.67□□□□□ -0.38
CHD7-209ENST00000529472 TIMP1P01033 207 aa12.67□□□□□ -0.38
CHD7-209ENST00000529472 KRT18P05783 430 aaKnown RBP12.67□□□□□ -0.38
CHD7-209ENST00000529472 CYP11B2P19099 503 aa12.67□□□□□ -0.38
CHD7-209ENST00000529472 ITGB8P26012 769 aa12.67□□□□□ -0.38
CHD7-209ENST00000529472 SYKP43405 635 aa12.67□□□□□ -0.38
CHD7-209ENST00000529472 MRPS6P82932 125 aaKnown RBP12.67□□□□□ -0.38
CHD7-209ENST00000529472 MLLT1Q03111 559 aaPredicted RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms