RNA–Protein interactions for RNA: ENST00000529372.5

PSMD13-209, Transcript of proteasome 26S subunit, non-ATPase 13, human

TSL 5

Gene PSMD13, Length 612 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD13-209	ENST00000529372	SPEM2	Q0P670	501 aa		13.62	□□□□□ -0.23
PSMD13-209	ENST00000529372	TMEM40	Q8WWA1	233 aa		13.62	□□□□□ -0.23
PSMD13-209	ENST00000529372	ATRIP	Q8WXE1	791 aa		13.62	□□□□□ -0.23
PSMD13-209	ENST00000529372	AUTS2	Q8WXX7	1259 aa		13.62	□□□□□ -0.23
PSMD13-209	ENST00000529372	TTC14	Q96N46	770 aa		13.62	□□□□□ -0.23
PSMD13-209	ENST00000529372	TMEM117	Q9H0C3	514 aa		13.62	□□□□□ -0.23
PSMD13-209	ENST00000529372	C1orf112	Q9NSG2	853 aa		13.62	□□□□□ -0.23
PSMD13-209	ENST00000529372	ECHDC1	Q9NTX5	307 aa		13.62	□□□□□ -0.23
PSMD13-209	ENST00000529372	TMEM161A	Q9NX61	479 aa		13.62	□□□□□ -0.23
PSMD13-209	ENST00000529372	EPS15L1	Q9UBC2	864 aa		13.62	□□□□□ -0.23
PSMD13-209	ENST00000529372	FRMPD4	Q14CM0	1322 aa		13.62	□□□□□ -0.23
PSMD13-209	ENST00000529372	C1QTNF9B	B2RNN3	333 aa		13.61	□□□□□ -0.23
PSMD13-209	ENST00000529372	TBC1D4	O60343	1298 aa		13.61	□□□□□ -0.23
PSMD13-209	ENST00000529372	CXCL14	O95715	111 aa		13.61	□□□□□ -0.23
PSMD13-209	ENST00000529372	C1QTNF9	P0C862	333 aa		13.61	□□□□□ -0.23
PSMD13-209	ENST00000529372	MARK3	P27448	753 aa		13.61	□□□□□ -0.23
PSMD13-209	ENST00000529372	TCF7	P36402	384 aa	Predicted RBP	13.61	□□□□□ -0.23
PSMD13-209	ENST00000529372	SP4	Q02446	784 aa		13.61	□□□□□ -0.23
PSMD13-209	ENST00000529372	WTAP	Q15007	396 aa		13.61	□□□□□ -0.23
PSMD13-209	ENST00000529372	ZMYM1	Q5SVZ6	1142 aa		13.61	□□□□□ -0.23
PSMD13-209	ENST00000529372	VPS53	Q5VIR6	699 aa		13.61	□□□□□ -0.23
PSMD13-209	ENST00000529372	TSHZ3	Q63HK5	1081 aa		13.61	□□□□□ -0.23
PSMD13-209	ENST00000529372	DCLRE1A	Q6PJP8	1040 aa		13.61	□□□□□ -0.23
PSMD13-209	ENST00000529372	FTSJ3	Q8IY81	847 aa	Known RBP	13.61	□□□□□ -0.23
PSMD13-209	ENST00000529372	KDF1	Q8NAX2	398 aa	Predicted RBP	13.61	□□□□□ -0.23
PSMD13-209	ENST00000529372	MYADM	Q96S97	322 aa		13.61	□□□□□ -0.23
PSMD13-209	ENST00000529372	DDX23	Q9BUQ8	820 aa	Known RBP	13.61	□□□□□ -0.23
PSMD13-209	ENST00000529372	ZBP1	Q9H171	429 aa		13.61	□□□□□ -0.23
PSMD13-209	ENST00000529372	SFXN1	Q9H9B4	322 aa		13.61	□□□□□ -0.23
PSMD13-209	ENST00000529372	CDHR5	Q9HBB8	845 aa		13.61	□□□□□ -0.23
PSMD13-209	ENST00000529372	SLC2A4RG	Q9NR83	387 aa		13.61	□□□□□ -0.23
PSMD13-209	ENST00000529372	MAP3K20	Q9NYL2	800 aa	Known RBP	13.61	□□□□□ -0.23
PSMD13-209	ENST00000529372	NOC2L	Q9Y3T9	749 aa	Known RBP	13.61	□□□□□ -0.23
PSMD13-209	ENST00000529372	MTF2	Q9Y483	593 aa	Predicted RBP	13.61	□□□□□ -0.23
PSMD13-209	ENST00000529372	LAMA4	Q16363	1823 aa		13.61	□□□□□ -0.23
PSMD13-209	ENST00000529372	GSTTP1	A0A1W2PQM5	241 aa		13.6	□□□□□ -0.23
PSMD13-209	ENST00000529372	TM4SF5	O14894	197 aa		13.6	□□□□□ -0.23
PSMD13-209	ENST00000529372	LAMTOR5	O43504	91 aa		13.6	□□□□□ -0.23
PSMD13-209	ENST00000529372	SMARCA5	O60264	1052 aa	Predicted RBP	13.6	□□□□□ -0.23
PSMD13-209	ENST00000529372	GDF9	O60383	454 aa		13.6	□□□□□ -0.23
PSMD13-209	ENST00000529372	RPLP2	P05387	115 aa	Known RBP	13.6	□□□□□ -0.23
PSMD13-209	ENST00000529372	INSRR	P14616	1297 aa		13.6	□□□□□ -0.23
PSMD13-209	ENST00000529372	NFX1	Q12986	1120 aa	Known RBP	13.6	□□□□□ -0.23
PSMD13-209	ENST00000529372	CABP7	Q86V35	215 aa		13.6	□□□□□ -0.23
PSMD13-209	ENST00000529372	TMEM173	Q86WV6	379 aa	Predicted RBP	13.6	□□□□□ -0.23
PSMD13-209	ENST00000529372	GLG1	Q92896	1179 aa		13.6	□□□□□ -0.23
PSMD13-209	ENST00000529372	TMEM121B	Q9BXQ6	578 aa	Predicted RBP	13.6	□□□□□ -0.23
PSMD13-209	ENST00000529372	ELAC1	Q9H777	363 aa	Known RBP	13.6	□□□□□ -0.23
PSMD13-209	ENST00000529372	ATP6V0A4	Q9HBG4	840 aa		13.6	□□□□□ -0.23
PSMD13-209	ENST00000529372	SPATA6	Q9NWH7	488 aa	Predicted RBP	13.6	□□□□□ -0.23
PSMD13-209	ENST00000529372	PCDHA1	Q9Y5I3	950 aa		13.6	□□□□□ -0.23
PSMD13-209	ENST00000529372	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	13.59	□□□□□ -0.23
PSMD13-209	ENST00000529372	ZNF316	A6NFI3	1004 aa	Predicted RBP	13.59	□□□□□ -0.23
PSMD13-209	ENST00000529372	FIBP	O43427	364 aa		13.59	□□□□□ -0.23
PSMD13-209	ENST00000529372	IGBP1	P78318	339 aa		13.59	□□□□□ -0.23
PSMD13-209	ENST00000529372	DSC3	Q14574	896 aa		13.59	□□□□□ -0.23
PSMD13-209	ENST00000529372	PTPN14	Q15678	1187 aa		13.59	□□□□□ -0.23
PSMD13-209	ENST00000529372	RRP12	Q5JTH9	1297 aa	Known RBP	13.59	□□□□□ -0.23
PSMD13-209	ENST00000529372	TSSK4	Q6SA08	328 aa		13.59	□□□□□ -0.23
PSMD13-209	ENST00000529372	LRSAM1	Q6UWE0	723 aa		13.59	□□□□□ -0.23
PSMD13-209	ENST00000529372	C15orf39	Q6ZRI6	1047 aa		13.59	□□□□□ -0.23
PSMD13-209	ENST00000529372	FAM43B	Q6ZT52	329 aa	Predicted RBP	13.59	□□□□□ -0.23
PSMD13-209	ENST00000529372	LRRC43	Q8N309	656 aa		13.59	□□□□□ -0.23
PSMD13-209	ENST00000529372	MAP4K1	Q92918	833 aa		13.59	□□□□□ -0.23
PSMD13-209	ENST00000529372	SENP7	Q9BQF6	1050 aa		13.59	□□□□□ -0.23
PSMD13-209	ENST00000529372	ERAP1	Q9NZ08	941 aa		13.59	□□□□□ -0.23
PSMD13-209	ENST00000529372	PCDHA2	Q9Y5H9	948 aa		13.59	□□□□□ -0.23
PSMD13-209	ENST00000529372	FREM2	Q5SZK8	3169 aa		13.59	□□□□□ -0.23
PSMD13-209	ENST00000529372	DENND3	A2RUS2	1198 aa		13.58	□□□□□ -0.24
PSMD13-209	ENST00000529372	ANHX	E9PGG2	379 aa		13.58	□□□□□ -0.24
PSMD13-209	ENST00000529372	ZIC2	O95409	532 aa	Predicted RBP	13.58	□□□□□ -0.24
PSMD13-209	ENST00000529372	TDGF1	P13385	188 aa		13.58	□□□□□ -0.24
PSMD13-209	ENST00000529372	KRT76	Q01546	638 aa		13.58	□□□□□ -0.24
PSMD13-209	ENST00000529372	NONO	Q15233	471 aa	Known RBP eCLIP	13.58	□□□□□ -0.24
PSMD13-209	ENST00000529372	GNPTAB	Q3T906	1256 aa		13.58	□□□□□ -0.24
PSMD13-209	ENST00000529372	UNQ6494/PRO21346	Q6UXR6	183 aa		13.58	□□□□□ -0.24
PSMD13-209	ENST00000529372	VPS52	Q8N1B4	723 aa		13.58	□□□□□ -0.24
PSMD13-209	ENST00000529372	TRAPPC12	Q8WVT3	735 aa		13.58	□□□□□ -0.24
PSMD13-209	ENST00000529372	NXPE3	Q969Y0	559 aa		13.58	□□□□□ -0.24
PSMD13-209	ENST00000529372	MTMR8	Q96EF0	704 aa		13.58	□□□□□ -0.24
PSMD13-209	ENST00000529372	PCYT2	Q99447	389 aa		13.58	□□□□□ -0.24
PSMD13-209	ENST00000529372	AMN	Q9BXJ7	453 aa		13.58	□□□□□ -0.24
PSMD13-209	ENST00000529372	PRMT8	Q9NR22	394 aa	Predicted RBP	13.58	□□□□□ -0.24
PSMD13-209	ENST00000529372	RTEL1	Q9NZ71	1219 aa		13.58	□□□□□ -0.24
PSMD13-209	ENST00000529372	GMEB2	Q9UKD1	530 aa		13.58	□□□□□ -0.24
PSMD13-209	ENST00000529372	ST3GAL5	Q9UNP4	418 aa		13.58	□□□□□ -0.24
PSMD13-209	ENST00000529372	F5	P12259	2224 aa		13.58	□□□□□ -0.24
PSMD13-209	ENST00000529372	LAMA1	P25391	3075 aa		13.57	□□□□□ -0.24
PSMD13-209	ENST00000529372	KANSL1L	A0AUZ9	987 aa		13.57	□□□□□ -0.24
PSMD13-209	ENST00000529372	RRN3P2	A6NIE6	340 aa		13.57	□□□□□ -0.24
PSMD13-209	ENST00000529372	NT5C1B-RDH14	C9J2C7	533 aa		13.57	□□□□□ -0.24
PSMD13-209	ENST00000529372	LRP3	O75074	770 aa		13.57	□□□□□ -0.24
PSMD13-209	ENST00000529372	ATP9A	O75110	1047 aa		13.57	□□□□□ -0.24
PSMD13-209	ENST00000529372	CTSA	P10619	480 aa		13.57	□□□□□ -0.24
PSMD13-209	ENST00000529372	HTR4	Q13639	388 aa		13.57	□□□□□ -0.24
PSMD13-209	ENST00000529372	CLLU1OS	Q5K130	101 aa		13.57	□□□□□ -0.24
PSMD13-209	ENST00000529372	PRR23C	Q6ZRP0	262 aa		13.57	□□□□□ -0.24
PSMD13-209	ENST00000529372	FCHSD1	Q86WN1	690 aa		13.57	□□□□□ -0.24
PSMD13-209	ENST00000529372	SAMD3	Q8N6K7	520 aa		13.57	□□□□□ -0.24
PSMD13-209	ENST00000529372	BCL7C	Q8WUZ0	217 aa	Predicted RBP	13.57	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms