RNA–Protein interactions for RNA: ENST00000529214.5

ATPAF1-209, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-209ENST00000529214 FANCCQ00597 558 aa7.06□□□□□ -1.28
ATPAF1-209ENST00000529214 TLE2Q04725 743 aa7.06□□□□□ -1.28
ATPAF1-209ENST00000529214 DMTNQ08495 405 aa7.06□□□□□ -1.28
ATPAF1-209ENST00000529214 ITGB3BPQ13352 177 aaPredicted RBP7.06□□□□□ -1.28
ATPAF1-209ENST00000529214 LETM2Q2VYF4 491 aa7.06□□□□□ -1.28
ATPAF1-209ENST00000529214 C6orf132Q5T0Z8 1188 aa7.06□□□□□ -1.28
ATPAF1-209ENST00000529214 RNF187Q5TA31 235 aaPredicted RBP7.06□□□□□ -1.28
ATPAF1-209ENST00000529214 LARP1BQ659C4 914 aaKnown RBP7.06□□□□□ -1.28
ATPAF1-209ENST00000529214 ANKRD33Q7Z3H0 272 aa7.06□□□□□ -1.28
ATPAF1-209ENST00000529214 RDH13Q8NBN7 331 aa7.06□□□□□ -1.28
ATPAF1-209ENST00000529214 TOX2Q96NM4 488 aa7.06□□□□□ -1.28
ATPAF1-209ENST00000529214 SDF4Q9BRK5 362 aa7.06□□□□□ -1.28
ATPAF1-209ENST00000529214 ZNF577Q9BSK1 485 aa7.06□□□□□ -1.28
ATPAF1-209ENST00000529214 C16orf70Q9BSU1 422 aa7.06□□□□□ -1.28
ATPAF1-209ENST00000529214 TBC1D22BQ9NU19 505 aa7.06□□□□□ -1.28
ATPAF1-209ENST00000529214 PKD2L1Q9P0L9 805 aa7.06□□□□□ -1.28
ATPAF1-209ENST00000529214 CXXC1Q9P0U4 656 aaPredicted RBP7.06□□□□□ -1.28
ATPAF1-209ENST00000529214 SLC9A2Q9UBY0 812 aa7.06□□□□□ -1.28
ATPAF1-209ENST00000529214 TNRC18O15417 2968 aaPredicted RBP7.06□□□□□ -1.28
ATPAF1-209ENST00000529214 HAS3O00219 553 aa7.05□□□□□ -1.28
ATPAF1-209ENST00000529214 CCNT1O60563 726 aaKnown RBP7.05□□□□□ -1.28
ATPAF1-209ENST00000529214 F2P00734 622 aa7.05□□□□□ -1.28
ATPAF1-209ENST00000529214 FBXO45P0C2W1 286 aa7.05□□□□□ -1.28
ATPAF1-209ENST00000529214 GCFC2P16383 781 aaKnown RBP7.05□□□□□ -1.28
ATPAF1-209ENST00000529214 PAX3P23760 479 aa7.05□□□□□ -1.28
ATPAF1-209ENST00000529214 TCF7P36402 384 aaPredicted RBP7.05□□□□□ -1.28
ATPAF1-209ENST00000529214 PSMC6P62333 389 aa7.05□□□□□ -1.28
ATPAF1-209ENST00000529214 FAAP100Q0VG06 881 aa7.05□□□□□ -1.28
ATPAF1-209ENST00000529214 TRIM60Q495X7 471 aa7.05□□□□□ -1.28
ATPAF1-209ENST00000529214 FRMPD3Q5JV73 1810 aa7.05□□□□□ -1.28
ATPAF1-209ENST00000529214 ZNF746Q6NUN9 644 aaPredicted RBP7.05□□□□□ -1.28
ATPAF1-209ENST00000529214 NFRKBQ6P4R8 1299 aa7.05□□□□□ -1.28
ATPAF1-209ENST00000529214 CACTIN-AS1Q8N1I8 211 aa7.05□□□□□ -1.28
ATPAF1-209ENST00000529214 SLC5A5Q92911 643 aa7.05□□□□□ -1.28
ATPAF1-209ENST00000529214 UIMC1Q96RL1 719 aa7.05□□□□□ -1.28
ATPAF1-209ENST00000529214 RIT2Q99578 217 aa7.05□□□□□ -1.28
ATPAF1-209ENST00000529214 NAP1L4Q99733 375 aaKnown RBP7.05□□□□□ -1.28
ATPAF1-209ENST00000529214 OSBPL2Q9H1P3 480 aa7.05□□□□□ -1.28
ATPAF1-209ENST00000529214 ACBD3Q9H3P7 528 aa7.05□□□□□ -1.28
ATPAF1-209ENST00000529214 JPH1Q9HDC5 661 aaPredicted RBP7.05□□□□□ -1.28
ATPAF1-209ENST00000529214 DDX25Q9UHL0 483 aaKnown RBP7.05□□□□□ -1.28
ATPAF1-209ENST00000529214 ATP11BQ9Y2G3 1177 aa7.05□□□□□ -1.28
ATPAF1-209ENST00000529214 NR2E3Q9Y5X4 410 aa7.05□□□□□ -1.28
ATPAF1-209ENST00000529214 MROH7Q68CQ1 1323 aa7.05□□□□□ -1.28
ATPAF1-209ENST00000529214 IGKV6D-21A0A0A0MT36 114 aa7.04□□□□□ -1.28
ATPAF1-209ENST00000529214 DCDC2CA8MYV0 355 aa7.04□□□□□ -1.28
ATPAF1-209ENST00000529214 KIF28PB7ZC32 967 aa7.04□□□□□ -1.28
ATPAF1-209ENST00000529214 H3BQV1 296 aa7.04□□□□□ -1.28
ATPAF1-209ENST00000529214 TBX3O15119 743 aa7.04□□□□□ -1.28
ATPAF1-209ENST00000529214 HRO43593 1189 aa7.04□□□□□ -1.28
ATPAF1-209ENST00000529214 SLC37A4O43826 429 aa7.04□□□□□ -1.28
ATPAF1-209ENST00000529214 LGR5O75473 907 aa7.04□□□□□ -1.28
ATPAF1-209ENST00000529214 PSMD10O75832 226 aa7.04□□□□□ -1.28
ATPAF1-209ENST00000529214 CCNE2O96020 404 aa7.04□□□□□ -1.28
ATPAF1-209ENST00000529214 CD4P01730 458 aa7.04□□□□□ -1.28
ATPAF1-209ENST00000529214 LGALS2P05162 132 aa7.04□□□□□ -1.28
ATPAF1-209ENST00000529214 DNAJB2P25686 324 aa7.04□□□□□ -1.28
ATPAF1-209ENST00000529214 PSEN2P49810 448 aa7.04□□□□□ -1.28
ATPAF1-209ENST00000529214 ACTR2P61160 394 aa7.04□□□□□ -1.28
ATPAF1-209ENST00000529214 SP4Q02446 784 aa7.04□□□□□ -1.28
ATPAF1-209ENST00000529214 GUCA2AQ02747 115 aa7.04□□□□□ -1.28
ATPAF1-209ENST00000529214 PTPN11Q06124 597 aaPredicted RBP7.04□□□□□ -1.28
ATPAF1-209ENST00000529214 RBL2Q08999 1139 aa7.04□□□□□ -1.28
ATPAF1-209ENST00000529214 KIAA0753Q2KHM9 967 aa7.04□□□□□ -1.28
ATPAF1-209ENST00000529214 B3GNT9Q6UX72 402 aa7.04□□□□□ -1.28
ATPAF1-209ENST00000529214 ABHD15Q6UXT9 468 aa7.04□□□□□ -1.28
ATPAF1-209ENST00000529214 SESTD1Q86VW0 696 aa7.04□□□□□ -1.28
ATPAF1-209ENST00000529214 JAZF1Q86VZ6 243 aa7.04□□□□□ -1.28
ATPAF1-209ENST00000529214 NOSTRINQ8IVI9 506 aa7.04□□□□□ -1.28
ATPAF1-209ENST00000529214 HSCBQ8IWL3 235 aa7.04□□□□□ -1.28
ATPAF1-209ENST00000529214 FAM126BQ8IXS8 530 aa7.04□□□□□ -1.28
ATPAF1-209ENST00000529214 ETNPPLQ8TBG4 499 aa7.04□□□□□ -1.28
ATPAF1-209ENST00000529214 RNF217Q8TC41 542 aa7.04□□□□□ -1.28
ATPAF1-209ENST00000529214 HAS1Q92839 578 aa7.04□□□□□ -1.28
ATPAF1-209ENST00000529214 KCTD12Q96CX2 325 aaKnown RBP7.04□□□□□ -1.28
ATPAF1-209ENST00000529214 FAM20AQ96MK3 541 aa7.04□□□□□ -1.28
ATPAF1-209ENST00000529214 PCYT2Q99447 389 aa7.04□□□□□ -1.28
ATPAF1-209ENST00000529214 KATNAL1Q9BW62 490 aa7.04□□□□□ -1.28
ATPAF1-209ENST00000529214 RNPEPQ9H4A4 650 aa7.04□□□□□ -1.28
ATPAF1-209ENST00000529214 SMARCAD1Q9H4L7 1026 aa7.04□□□□□ -1.28
ATPAF1-209ENST00000529214 KCNMB3Q9NPA1 279 aa7.04□□□□□ -1.28
ATPAF1-209ENST00000529214 MYH7BA7E2Y1 1941 aa7.04□□□□□ -1.28
ATPAF1-209ENST00000529214 TRIM43BA6NCK2 446 aa7.04□□□□□ -1.28
ATPAF1-209ENST00000529214 DDX39AO00148 427 aaKnown RBP7.04□□□□□ -1.28
ATPAF1-209ENST00000529214 WNT7AO00755 349 aa7.04□□□□□ -1.28
ATPAF1-209ENST00000529214 CREB3O43889 395 aa7.04□□□□□ -1.28
ATPAF1-209ENST00000529214 B4GALT4O60513 344 aa7.04□□□□□ -1.28
ATPAF1-209ENST00000529214 PQBP1O60828 265 aaKnown RBP7.04□□□□□ -1.28
ATPAF1-209ENST00000529214 CLTBP09497 229 aa7.04□□□□□ -1.28
ATPAF1-209ENST00000529214 SUPT20HL2P0C7V6 817 aa7.04□□□□□ -1.28
ATPAF1-209ENST00000529214 ZNF286BP0CG31 522 aa7.04□□□□□ -1.28
ATPAF1-209ENST00000529214 PDCP20941 246 aa7.04□□□□□ -1.28
ATPAF1-209ENST00000529214 SYT1P21579 422 aa7.04□□□□□ -1.28
ATPAF1-209ENST00000529214 HSD3B2P26439 372 aa7.04□□□□□ -1.28
ATPAF1-209ENST00000529214 TRAPPC10P48553 1259 aa7.04□□□□□ -1.28
ATPAF1-209ENST00000529214 TOB1P50616 345 aaPredicted RBP7.04□□□□□ -1.28
ATPAF1-209ENST00000529214 STAT5BP51692 787 aa7.04□□□□□ -1.28
ATPAF1-209ENST00000529214 KRT76Q01546 638 aa7.04□□□□□ -1.28
ATPAF1-209ENST00000529214 ECM1Q16610 540 aa7.04□□□□□ -1.28
ATPAF1-209ENST00000529214 OCLNQ16625 522 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms