RNA–Protein interactions for RNA: ENST00000529046.5

CSDE1-212, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-212ENST00000529046 CRY1Q16526 586 aa6.67□□□□□ -1.34
CSDE1-212ENST00000529046 FIGNQ5HY92 759 aa6.67□□□□□ -1.34
CSDE1-212ENST00000529046 CREB3L3Q68CJ9 461 aa6.67□□□□□ -1.34
CSDE1-212ENST00000529046 TEPPQ6URK8 271 aa6.67□□□□□ -1.34
CSDE1-212ENST00000529046 ARHGAP36Q6ZRI8 547 aa6.67□□□□□ -1.34
CSDE1-212ENST00000529046 OSTM1Q86WC4 334 aa6.67□□□□□ -1.34
CSDE1-212ENST00000529046 AHI1Q8N157 1196 aa6.67□□□□□ -1.34
CSDE1-212ENST00000529046 CHST14Q8NCH0 376 aa6.67□□□□□ -1.34
CSDE1-212ENST00000529046 B4GALT6Q9UBX8 382 aa6.67□□□□□ -1.34
CSDE1-212ENST00000529046 DSEQ9UL01 958 aa6.67□□□□□ -1.34
CSDE1-212ENST00000529046 ZNF335Q9H4Z2 1342 aaPredicted RBP6.67□□□□□ -1.34
CSDE1-212ENST00000529046 ARHGAP31Q2M1Z3 1444 aa6.67□□□□□ -1.34
CSDE1-212ENST00000529046 CPS1P31327 1500 aa6.66□□□□□ -1.34
CSDE1-212ENST00000529046 PRICKLE3O43900 615 aaPredicted RBP6.66□□□□□ -1.34
CSDE1-212ENST00000529046 CLASP2O75122 1294 aaKnown RBP6.66□□□□□ -1.34
CSDE1-212ENST00000529046 F2P00734 622 aa6.66□□□□□ -1.34
CSDE1-212ENST00000529046 APPP05067 770 aa6.66□□□□□ -1.34
CSDE1-212ENST00000529046 CELA3BP08861 270 aa6.66□□□□□ -1.34
CSDE1-212ENST00000529046 ST5P78524 1137 aa6.66□□□□□ -1.34
CSDE1-212ENST00000529046 DSG1Q02413 1049 aa6.66□□□□□ -1.34
CSDE1-212ENST00000529046 RTP5Q14D33 572 aa6.66□□□□□ -1.34
CSDE1-212ENST00000529046 PCBP1Q15365 356 aaKnown RBP eCLIP6.66□□□□□ -1.34
CSDE1-212ENST00000529046 CFAP100Q494V2 611 aa6.66□□□□□ -1.34
CSDE1-212ENST00000529046 UBXN11Q5T124 520 aa6.66□□□□□ -1.34
CSDE1-212ENST00000529046 ZFYVE27Q5T4F4 411 aa6.66□□□□□ -1.34
CSDE1-212ENST00000529046 PIK3R6Q5UE93 754 aa6.66□□□□□ -1.34
CSDE1-212ENST00000529046 UBE2R2Q712K3 238 aaPredicted RBP6.66□□□□□ -1.34
CSDE1-212ENST00000529046 KCTD1Q719H9 257 aa6.66□□□□□ -1.34
CSDE1-212ENST00000529046 TRIM48Q8IWZ4 208 aa6.66□□□□□ -1.34
CSDE1-212ENST00000529046 NLGN4XQ8N0W4 816 aa6.66□□□□□ -1.34
CSDE1-212ENST00000529046 AFAP1L2Q8N4X5 818 aa6.66□□□□□ -1.34
CSDE1-212ENST00000529046 CLEC4DQ8WXI8 215 aa6.66□□□□□ -1.34
CSDE1-212ENST00000529046 DLG3Q92796 817 aa6.66□□□□□ -1.34
CSDE1-212ENST00000529046 BRINP2Q9C0B6 783 aa6.66□□□□□ -1.34
CSDE1-212ENST00000529046 CAAP1Q9H8G2 361 aa6.66□□□□□ -1.34
CSDE1-212ENST00000529046 NUB1Q9Y5A7 615 aa6.66□□□□□ -1.34
CSDE1-212ENST00000529046 SPATA31D1Q6ZQQ2 1576 aa6.65□□□□□ -1.34
CSDE1-212ENST00000529046 DEPDC5O75140 1603 aa6.65□□□□□ -1.34
CSDE1-212ENST00000529046 RNF17Q9BXT8 1623 aaKnown RBP6.65□□□□□ -1.34
CSDE1-212ENST00000529046 EIF2AK4Q9P2K8 1649 aaKnown RBP6.65□□□□□ -1.34
CSDE1-212ENST00000529046 M0R2C6 588 aa6.65□□□□□ -1.34
CSDE1-212ENST00000529046 SLC27A2O14975 620 aa6.65□□□□□ -1.34
CSDE1-212ENST00000529046 LRG1P02750 347 aa6.65□□□□□ -1.34
CSDE1-212ENST00000529046 ADAM9Q13443 819 aa6.65□□□□□ -1.34
CSDE1-212ENST00000529046 DHCR24Q15392 516 aa6.65□□□□□ -1.34
CSDE1-212ENST00000529046 ARHGAP44Q17R89 818 aa6.65□□□□□ -1.34
CSDE1-212ENST00000529046 RGL3Q3MIN7 710 aa6.65□□□□□ -1.34
CSDE1-212ENST00000529046 FAM26FQ5R3K3 315 aa6.65□□□□□ -1.34
CSDE1-212ENST00000529046 PRR31Q5SQ13 230 aa6.65□□□□□ -1.34
CSDE1-212ENST00000529046 PKN3Q6P5Z2 889 aa6.65□□□□□ -1.34
CSDE1-212ENST00000529046 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.65□□□□□ -1.34
CSDE1-212ENST00000529046 FERMT3Q86UX7 667 aa6.65□□□□□ -1.34
CSDE1-212ENST00000529046 WNK4Q96J92 1243 aa6.65□□□□□ -1.34
CSDE1-212ENST00000529046 ZSWIM3Q96MP5 696 aa6.65□□□□□ -1.34
CSDE1-212ENST00000529046 CLIC6Q96NY7 704 aa6.65□□□□□ -1.34
CSDE1-212ENST00000529046 BDH2Q9BUT1 245 aa6.65□□□□□ -1.34
CSDE1-212ENST00000529046 SPC25Q9HBM1 224 aa6.65□□□□□ -1.34
CSDE1-212ENST00000529046 CATSPERZQ9NTU4 200 aa6.65□□□□□ -1.34
CSDE1-212ENST00000529046 B3GALT1Q9Y5Z6 326 aa6.65□□□□□ -1.34
CSDE1-212ENST00000529046 SHANK2Q9UPX8 1470 aa6.65□□□□□ -1.35
CSDE1-212ENST00000529046 DUOX2Q9NRD8 1548 aa6.65□□□□□ -1.35
CSDE1-212ENST00000529046 UGGT1Q9NYU2 1555 aa6.65□□□□□ -1.35
CSDE1-212ENST00000529046 ZC3H13Q5T200 1668 aaKnown RBP6.65□□□□□ -1.35
CSDE1-212ENST00000529046 TOM1O60784 492 aa6.64□□□□□ -1.35
CSDE1-212ENST00000529046 CNR2P34972 360 aa6.64□□□□□ -1.35
CSDE1-212ENST00000529046 DNM2P50570 870 aa6.64□□□□□ -1.35
CSDE1-212ENST00000529046 TUSC3Q13454 348 aa6.64□□□□□ -1.35
CSDE1-212ENST00000529046 SKOR2Q2VWA4 1001 aaPredicted RBP6.64□□□□□ -1.35
CSDE1-212ENST00000529046 PRAMEF18Q5VWM3 479 aa6.64□□□□□ -1.35
CSDE1-212ENST00000529046 FSTL4Q6MZW2 842 aa6.64□□□□□ -1.35
CSDE1-212ENST00000529046 PTRH1Q86Y79 214 aaKnown RBP6.64□□□□□ -1.35
CSDE1-212ENST00000529046 WRNIP1Q96S55 665 aa6.64□□□□□ -1.35
CSDE1-212ENST00000529046 TMEM209Q96SK2 561 aa6.64□□□□□ -1.35
CSDE1-212ENST00000529046 IFT57Q9NWB7 429 aa6.64□□□□□ -1.35
CSDE1-212ENST00000529046 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.64□□□□□ -1.35
CSDE1-212ENST00000529046 ERBINQ96RT1 1412 aa6.64□□□□□ -1.35
CSDE1-212ENST00000529046 ABCC3O15438 1527 aa6.64□□□□□ -1.35
CSDE1-212ENST00000529046 NEURL4Q96JN8 1562 aa6.64□□□□□ -1.35
CSDE1-212ENST00000529046 FAM90A27PA6NNH2 459 aa6.63□□□□□ -1.35
CSDE1-212ENST00000529046 ACOT7O00154 380 aa6.63□□□□□ -1.35
CSDE1-212ENST00000529046 DDX3XO00571 662 aaKnown RBP eCLIP6.63□□□□□ -1.356e-27■■■□□ 16.5
CSDE1-212ENST00000529046 DNAJC6O75061 913 aa6.63□□□□□ -1.35
CSDE1-212ENST00000529046 NPHP4O75161 1426 aaPredicted RBP6.63□□□□□ -1.35
CSDE1-212ENST00000529046 CYP7B1O75881 506 aa6.63□□□□□ -1.35
CSDE1-212ENST00000529046 BPIP17213 487 aa6.63□□□□□ -1.35
CSDE1-212ENST00000529046 GJA4P35212 333 aa6.63□□□□□ -1.35
CSDE1-212ENST00000529046 SEC23AQ15436 765 aa6.63□□□□□ -1.35
CSDE1-212ENST00000529046 RNF187Q5TA31 235 aaPredicted RBP6.63□□□□□ -1.35
CSDE1-212ENST00000529046 MCTP2Q6DN12 878 aa6.63□□□□□ -1.35
CSDE1-212ENST00000529046 CNNM4Q6P4Q7 775 aa6.63□□□□□ -1.35
CSDE1-212ENST00000529046 PROSER1Q86XN7 944 aa6.63□□□□□ -1.35
CSDE1-212ENST00000529046 CISD2Q8N5K1 135 aaKnown RBP6.63□□□□□ -1.35
CSDE1-212ENST00000529046 CHAC2Q8WUX2 184 aa6.63□□□□□ -1.35
CSDE1-212ENST00000529046 BOCQ9BWV1 1114 aa6.63□□□□□ -1.35
CSDE1-212ENST00000529046 CD244Q9BZW8 370 aa6.63□□□□□ -1.35
CSDE1-212ENST00000529046 DISP3Q9P2K9 1392 aa6.63□□□□□ -1.35
CSDE1-212ENST00000529046 DUSP10Q9Y6W6 482 aa6.63□□□□□ -1.35
CSDE1-212ENST00000529046 ERVK-7P63135 1459 aa6.62□□□□□ -1.35
CSDE1-212ENST00000529046 ABCC5O15440 1437 aa6.62□□□□□ -1.35
CSDE1-212ENST00000529046 SLC12A8A0AV02 714 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms