RNA–Protein interactions for RNA: ENST00000528611.1

MACF1-228, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 3

Gene MACF1, Length 380 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-228ENST00000528611 CLIC6Q96NY7 704 aa6.92□□□□□ -1.3
MACF1-228ENST00000528611 DEFB118Q96PH6 123 aa6.92□□□□□ -1.3
MACF1-228ENST00000528611 PNMA5Q96PV4 448 aa6.92□□□□□ -1.3
MACF1-228ENST00000528611 GSDMAQ96QA5 445 aa6.92□□□□□ -1.3
MACF1-228ENST00000528611 PCYT2Q99447 389 aa6.92□□□□□ -1.3
MACF1-228ENST00000528611 C7orf25Q9BPX7 421 aa6.92□□□□□ -1.3
MACF1-228ENST00000528611 NTPCRQ9BSD7 190 aaKnown RBP6.92□□□□□ -1.3
MACF1-228ENST00000528611 NFKBIZQ9BYH8 718 aa6.92□□□□□ -1.3
MACF1-228ENST00000528611 PDLIM7Q9NR12 457 aa6.92□□□□□ -1.3
MACF1-228ENST00000528611 CYP26B1Q9NR63 512 aa6.92□□□□□ -1.3
MACF1-228ENST00000528611 RMND1Q9NWS8 449 aa6.92□□□□□ -1.3
MACF1-228ENST00000528611 LARSQ9P2J5 1176 aaKnown RBP6.92□□□□□ -1.3
MACF1-228ENST00000528611 GTF2IRD1Q9UHL9 959 aa6.92□□□□□ -1.3
MACF1-228ENST00000528611 WDR81Q562E7 1941 aa6.91□□□□□ -1.3
MACF1-228ENST00000528611 A0A1B0GVL5 298 aa6.91□□□□□ -1.3
MACF1-228ENST00000528611 ARHGEF35A5YM69 484 aa6.91□□□□□ -1.3
MACF1-228ENST00000528611 DDX39AO00148 427 aaKnown RBP6.91□□□□□ -1.3
MACF1-228ENST00000528611 ARVCFO00192 962 aa6.91□□□□□ -1.3
MACF1-228ENST00000528611 CHMP2AO43633 222 aa6.91□□□□□ -1.3
MACF1-228ENST00000528611 ZNF862O60290 1169 aa6.91□□□□□ -1.3
MACF1-228ENST00000528611 SMC2O95347 1197 aa6.91□□□□□ -1.3
MACF1-228ENST00000528611 CAVIN2O95810 425 aa6.91□□□□□ -1.3
MACF1-228ENST00000528611 PGK1P00558 417 aa6.91□□□□□ -1.3
MACF1-228ENST00000528611 TFRCP02786 760 aaKnown RBP6.91□□□□□ -1.3
MACF1-228ENST00000528611 PLA2G4BP0C869 781 aa6.91□□□□□ -1.3
MACF1-228ENST00000528611 GAP43P17677 238 aa6.91□□□□□ -1.3
MACF1-228ENST00000528611 PLCG1P19174 1290 aa6.91□□□□□ -1.3
MACF1-228ENST00000528611 ATP4AP20648 1035 aa6.91□□□□□ -1.3
MACF1-228ENST00000528611 PSEN2P49810 448 aa6.91□□□□□ -1.3
MACF1-228ENST00000528611 CDK7P50613 346 aa6.91□□□□□ -1.3
MACF1-228ENST00000528611 NDUFA8P51970 172 aa6.91□□□□□ -1.3
MACF1-228ENST00000528611 ZNF131P52739 623 aa6.91□□□□□ -1.3
MACF1-228ENST00000528611 SLC12A3P55017 1021 aa6.91□□□□□ -1.3
MACF1-228ENST00000528611 SNRPFP62306 86 aaKnown RBP6.91□□□□□ -1.3
MACF1-228ENST00000528611 GRIN1Q05586 938 aa6.91□□□□□ -1.3
MACF1-228ENST00000528611 TBC1D8BQ0IIM8 1120 aa6.91□□□□□ -1.3
MACF1-228ENST00000528611 ITGA7Q13683 1181 aa6.91□□□□□ -1.3
MACF1-228ENST00000528611 HSP90AA2PQ14568 343 aaPredicted RBP6.91□□□□□ -1.3
MACF1-228ENST00000528611 KCNB1Q14721 858 aa6.91□□□□□ -1.3
MACF1-228ENST00000528611 KARSQ15046 597 aaKnown RBP6.91□□□□□ -1.3
MACF1-228ENST00000528611 MTFR1Q15390 333 aa6.91□□□□□ -1.3
MACF1-228ENST00000528611 KIAA0753Q2KHM9 967 aa6.91□□□□□ -1.3
MACF1-228ENST00000528611 COBLL1Q53SF7 1204 aa6.91□□□□□ -1.3
MACF1-228ENST00000528611 NAALADL2Q58DX5 795 aa6.91□□□□□ -1.3
MACF1-228ENST00000528611 XKR9Q5GH70 373 aa6.91□□□□□ -1.3
MACF1-228ENST00000528611 ODR4Q5SWX8 454 aa6.91□□□□□ -1.3
MACF1-228ENST00000528611 STXBP4Q6ZWJ1 553 aa6.91□□□□□ -1.3
MACF1-228ENST00000528611 C1orf186Q6ZWK4 172 aa6.91□□□□□ -1.3
MACF1-228ENST00000528611 ANKRD33Q7Z3H0 272 aa6.91□□□□□ -1.3
MACF1-228ENST00000528611 NECAB2Q7Z6G3 386 aa6.91□□□□□ -1.3
MACF1-228ENST00000528611 RSPH3Q86UC2 560 aa6.91□□□□□ -1.3
MACF1-228ENST00000528611 ZNF410Q86VK4 478 aa6.91□□□□□ -1.3
MACF1-228ENST00000528611 IFNLR1Q8IU57 520 aaPredicted RBP6.91□□□□□ -1.3
MACF1-228ENST00000528611 CKAP2LQ8IYA6 745 aa6.91□□□□□ -1.3
MACF1-228ENST00000528611 CCDC155Q8N6L0 562 aa6.91□□□□□ -1.3
MACF1-228ENST00000528611 C7orf31Q8N865 590 aa6.91□□□□□ -1.3
MACF1-228ENST00000528611 USP38Q8NB14 1042 aa6.91□□□□□ -1.3
MACF1-228ENST00000528611 BANK1Q8NDB2 785 aa6.91□□□□□ -1.3
MACF1-228ENST00000528611 CAGE1Q8TC20 777 aa6.91□□□□□ -1.3
MACF1-228ENST00000528611 ZFP91Q96JP5 570 aaPredicted RBP6.91□□□□□ -1.3
MACF1-228ENST00000528611 CEP170P1Q96L14 293 aa6.91□□□□□ -1.3
MACF1-228ENST00000528611 CEP89Q96ST8 783 aa6.91□□□□□ -1.3
MACF1-228ENST00000528611 INO80BQ9C086 356 aaPredicted RBP6.91□□□□□ -1.3
MACF1-228ENST00000528611 ST6GALNAC4Q9H4F1 302 aa6.91□□□□□ -1.3
MACF1-228ENST00000528611 ATP6V0A4Q9HBG4 840 aa6.91□□□□□ -1.3
MACF1-228ENST00000528611 STARD7Q9NQZ5 370 aa6.91□□□□□ -1.3
MACF1-228ENST00000528611 OLFML3Q9NRN5 406 aa6.91□□□□□ -1.3
MACF1-228ENST00000528611 BLOC1S4Q9NUP1 217 aa6.91□□□□□ -1.3
MACF1-228ENST00000528611 RGL1Q9NZL6 768 aa6.91□□□□□ -1.3
MACF1-228ENST00000528611 PKD2L1Q9P0L9 805 aa6.91□□□□□ -1.3
MACF1-228ENST00000528611 PCDHA2Q9Y5H9 948 aa6.91□□□□□ -1.3
MACF1-228ENST00000528611 FRMPD3Q5JV73 1810 aa6.9□□□□□ -1.3
MACF1-228ENST00000528611 A0A1W2PQ45 241 aaPredicted RBP6.9□□□□□ -1.3
MACF1-228ENST00000528611 A0A1W2PQY0 241 aa6.9□□□□□ -1.3
MACF1-228ENST00000528611 FRMD3A2A2Y4 597 aa6.9□□□□□ -1.3
MACF1-228ENST00000528611 C17orf102A2RUQ5 167 aa6.9□□□□□ -1.3
MACF1-228ENST00000528611 TLR3O15455 904 aaKnown RBP6.9□□□□□ -1.3
MACF1-228ENST00000528611 ACTN4O43707 911 aaKnown RBP6.9□□□□□ -1.3
MACF1-228ENST00000528611 GTPBP6O43824 516 aaPredicted RBP6.9□□□□□ -1.3
MACF1-228ENST00000528611 MYL3P08590 195 aa6.9□□□□□ -1.3
MACF1-228ENST00000528611 INSRRP14616 1297 aa6.9□□□□□ -1.3
MACF1-228ENST00000528611 CDC25AP30304 524 aa6.9□□□□□ -1.3
MACF1-228ENST00000528611 EFNA5P52803 228 aa6.9□□□□□ -1.3
MACF1-228ENST00000528611 SMTNP53814 917 aa6.9□□□□□ -1.3
MACF1-228ENST00000528611 MDM2Q00987 491 aaPredicted RBP6.9□□□□□ -1.3
MACF1-228ENST00000528611 CYP4A11Q02928 519 aa6.9□□□□□ -1.3
MACF1-228ENST00000528611 PPFIA1Q13136 1202 aa6.9□□□□□ -1.3
MACF1-228ENST00000528611 PTK7Q13308 1070 aa6.9□□□□□ -1.3
MACF1-228ENST00000528611 TFDP1Q14186 410 aa6.9□□□□□ -1.3
MACF1-228ENST00000528611 CTTNQ14247 550 aaKnown RBP6.9□□□□□ -1.3
MACF1-228ENST00000528611 GRIK4Q16099 956 aa6.9□□□□□ -1.3
MACF1-228ENST00000528611 UTP14CQ5TAP6 766 aaKnown RBP6.9□□□□□ -1.3
MACF1-228ENST00000528611 RINT1Q6NUQ1 792 aa6.9□□□□□ -1.3
MACF1-228ENST00000528611 PADI6Q6TGC4 694 aa6.9□□□□□ -1.3
MACF1-228ENST00000528611 RBM43Q6ZSC3 357 aaKnown RBP6.9□□□□□ -1.3
MACF1-228ENST00000528611 USP49Q70CQ1 688 aa6.9□□□□□ -1.3
MACF1-228ENST00000528611 CCDC65Q8IXS2 484 aa6.9□□□□□ -1.3
MACF1-228ENST00000528611 TMEM174Q8WUU8 243 aa6.9□□□□□ -1.3
MACF1-228ENST00000528611 SPIRE2Q8WWL2 714 aa6.9□□□□□ -1.3
MACF1-228ENST00000528611 RSPH1Q8WYR4 309 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms