RNA–Protein interactions for RNA: ENST00000528280.1

CHD7-208, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-208ENST00000528280 C22orf31O95567 290 aa10.79□□□□□ -0.68
CHD7-208ENST00000528280 MMP1P03956 469 aa10.79□□□□□ -0.68
CHD7-208ENST00000528280 P4HBP07237 508 aaKnown RBP10.79□□□□□ -0.68
CHD7-208ENST00000528280 FDPSP14324 419 aaKnown RBP10.79□□□□□ -0.68
CHD7-208ENST00000528280 QARSP47897 775 aaKnown RBP10.79□□□□□ -0.68
CHD7-208ENST00000528280 HMGN5P82970 282 aaKnown RBP10.79□□□□□ -0.68
CHD7-208ENST00000528280 TMEM62Q0P6H9 643 aa10.79□□□□□ -0.68
CHD7-208ENST00000528280 GRB10Q13322 594 aa10.79□□□□□ -0.68
CHD7-208ENST00000528280 NAALADL2Q58DX5 795 aa10.79□□□□□ -0.68
CHD7-208ENST00000528280 B3GNT9Q6UX72 402 aa10.79□□□□□ -0.68
CHD7-208ENST00000528280 OTUD6AQ7L8S5 288 aa10.79□□□□□ -0.68
CHD7-208ENST00000528280 TRMT1LQ7Z2T5 733 aaKnown RBP10.79□□□□□ -0.68
CHD7-208ENST00000528280 TMCO2Q7Z6W1 182 aaPredicted RBP10.79□□□□□ -0.68
CHD7-208ENST00000528280 NPAS4Q8IUM7 802 aa10.79□□□□□ -0.68
CHD7-208ENST00000528280 TMEM192Q8IY95 271 aa10.79□□□□□ -0.68
CHD7-208ENST00000528280 NSUN7Q8NE18 718 aaKnown RBP10.79□□□□□ -0.68
CHD7-208ENST00000528280 INO80BQ9C086 356 aaPredicted RBP10.79□□□□□ -0.68
CHD7-208ENST00000528280 KCNMB3Q9NPA1 279 aa10.79□□□□□ -0.68
CHD7-208ENST00000528280 LRFN2Q9ULH4 789 aa10.79□□□□□ -0.68
CHD7-208ENST00000528280 PCDHB7Q9Y5E2 793 aa10.79□□□□□ -0.68
CHD7-208ENST00000528280 DENND3A2RUS2 1198 aa10.78□□□□□ -0.68
CHD7-208ENST00000528280 FAM86C2PA6NEL3 165 aa10.78□□□□□ -0.68
CHD7-208ENST00000528280 PI4K2BG5E9Z4 385 aa10.78□□□□□ -0.68
CHD7-208ENST00000528280 H3BNC9 293 aa10.78□□□□□ -0.68
CHD7-208ENST00000528280 NCK2O43639 380 aa10.78□□□□□ -0.68
CHD7-208ENST00000528280 ZNF862O60290 1169 aa10.78□□□□□ -0.68
CHD7-208ENST00000528280 DGKIO75912 1065 aa10.78□□□□□ -0.68
CHD7-208ENST00000528280 ZSCAN20P17040 1043 aaPredicted RBP10.78□□□□□ -0.68
CHD7-208ENST00000528280 EIF4BP23588 611 aaKnown RBP10.78□□□□□ -0.68
CHD7-208ENST00000528280 RBM25P49756 843 aaKnown RBP10.78□□□□□ -0.68
CHD7-208ENST00000528280 PRKCEQ02156 737 aa10.78□□□□□ -0.68
CHD7-208ENST00000528280 BTG3Q14201 252 aaPredicted RBP10.78□□□□□ -0.68
CHD7-208ENST00000528280 EPHA7Q15375 998 aa10.78□□□□□ -0.68
CHD7-208ENST00000528280 SKIV2LQ15477 1246 aaKnown RBP10.78□□□□□ -0.68
CHD7-208ENST00000528280 TARBP2Q15633 366 aaKnown RBP10.78□□□□□ -0.68
CHD7-208ENST00000528280 EPC2Q52LR7 807 aa10.78□□□□□ -0.68
CHD7-208ENST00000528280 SLC24A5Q71RS6 500 aa10.78□□□□□ -0.68
CHD7-208ENST00000528280 RTN4RL1Q86UN2 441 aaPredicted RBP10.78□□□□□ -0.68
CHD7-208ENST00000528280 CMTR2Q8IYT2 770 aaKnown RBP10.78□□□□□ -0.68
CHD7-208ENST00000528280 ZBTB10Q96DT7 871 aa10.78□□□□□ -0.68
CHD7-208ENST00000528280 PLVAPQ9BX97 442 aa10.78□□□□□ -0.68
CHD7-208ENST00000528280 OSBPL7Q9BZF2 842 aa10.78□□□□□ -0.68
CHD7-208ENST00000528280 ERVK-5Q9HDB9 667 aa10.78□□□□□ -0.68
CHD7-208ENST00000528280 RGS18Q9NS28 235 aa10.78□□□□□ -0.68
CHD7-208ENST00000528280 PCDHA12Q9UN75 941 aa10.78□□□□□ -0.68
CHD7-208ENST00000528280 ST3GAL5Q9UNP4 418 aa10.78□□□□□ -0.68
CHD7-208ENST00000528280 AKT3Q9Y243 479 aa10.78□□□□□ -0.68
CHD7-208ENST00000528280 GINS2Q9Y248 185 aa10.78□□□□□ -0.68
CHD7-208ENST00000528280 KIF3AQ9Y496 699 aa10.78□□□□□ -0.68
CHD7-208ENST00000528280 WDFY4Q6ZS81 3184 aa10.77□□□□□ -0.69
CHD7-208ENST00000528280 C5orf67F2Z3F1 127 aa10.77□□□□□ -0.69
CHD7-208ENST00000528280 GAS2O43903 313 aaKnown RBP10.77□□□□□ -0.69
CHD7-208ENST00000528280 ST18O60284 1047 aa10.77□□□□□ -0.69
CHD7-208ENST00000528280 GPR32O75388 356 aa10.77□□□□□ -0.69
CHD7-208ENST00000528280 BMPR1AP36894 532 aa10.77□□□□□ -0.69
CHD7-208ENST00000528280 SARSP49591 514 aaKnown RBP10.77□□□□□ -0.69
CHD7-208ENST00000528280 NLRP11P59045 1033 aaKnown RBP10.77□□□□□ -0.69
CHD7-208ENST00000528280 FAM189BP81408 668 aa10.77□□□□□ -0.69
CHD7-208ENST00000528280 ORC2Q13416 577 aaPredicted RBP10.77□□□□□ -0.69
CHD7-208ENST00000528280 GPM6BQ13491 265 aa10.77□□□□□ -0.69
CHD7-208ENST00000528280 KIZQ2M2Z5 673 aa10.77□□□□□ -0.69
CHD7-208ENST00000528280 KRT40Q6A162 431 aa10.77□□□□□ -0.69
CHD7-208ENST00000528280 C4orf19Q8IY42 314 aa10.77□□□□□ -0.69
CHD7-208ENST00000528280 DIS3L2Q8IYB7 885 aaKnown RBP10.77□□□□□ -0.69
CHD7-208ENST00000528280 MICALL1Q8N3F8 863 aa10.77□□□□□ -0.69
CHD7-208ENST00000528280 FAM184AQ8NB25 1140 aa10.77□□□□□ -0.69
CHD7-208ENST00000528280 OXER1Q8TDS5 423 aa10.77□□□□□ -0.69
CHD7-208ENST00000528280 CLP1Q92989 425 aaKnown RBP10.77□□□□□ -0.69
CHD7-208ENST00000528280 HLA-CQ95604 372 aa10.77□□□□□ -0.69
CHD7-208ENST00000528280 ZNF689Q96CS4 500 aaPredicted RBP10.77□□□□□ -0.69
CHD7-208ENST00000528280 MRPL38Q96DV4 380 aaKnown RBP10.77□□□□□ -0.69
CHD7-208ENST00000528280 C11orf84Q9BUA3 381 aaPredicted RBP10.77□□□□□ -0.69
CHD7-208ENST00000528280 GCOM2Q9BZD3 368 aaPredicted RBP10.77□□□□□ -0.69
CHD7-208ENST00000528280 LMAN2LQ9H0V9 348 aa10.77□□□□□ -0.69
CHD7-208ENST00000528280 ELAC1Q9H777 363 aaKnown RBP10.77□□□□□ -0.69
CHD7-208ENST00000528280 ZSWIM4Q9H7M6 989 aa10.77□□□□□ -0.69
CHD7-208ENST00000528280 AAASQ9NRG9 546 aa10.77□□□□□ -0.69
CHD7-208ENST00000528280 SEPT9Q9UHD8 586 aaPredicted RBP10.77□□□□□ -0.69
CHD7-208ENST00000528280 MTUS1Q9ULD2 1270 aa10.77□□□□□ -0.69
CHD7-208ENST00000528280 NOC2LQ9Y3T9 749 aaKnown RBP10.77□□□□□ -0.69
CHD7-208ENST00000528280 MICAL3Q7RTP6 2002 aa10.77□□□□□ -0.69
CHD7-208ENST00000528280 EPOPA6NHQ4 379 aa10.76□□□□□ -0.69
CHD7-208ENST00000528280 PRR33A8MZF0 331 aa10.76□□□□□ -0.69
CHD7-208ENST00000528280 BTBD18B2RXH4 712 aa10.76□□□□□ -0.69
CHD7-208ENST00000528280 ASAP2O43150 1006 aa10.76□□□□□ -0.69
CHD7-208ENST00000528280 HOXA2O43364 376 aa10.76□□□□□ -0.69
CHD7-208ENST00000528280 SLC37A4O43826 429 aa10.76□□□□□ -0.69
CHD7-208ENST00000528280 LPXNO60711 386 aa10.76□□□□□ -0.69
CHD7-208ENST00000528280 MAFO75444 373 aaPredicted RBP10.76□□□□□ -0.69
CHD7-208ENST00000528280 ARHGEF15O94989 841 aa10.76□□□□□ -0.69
CHD7-208ENST00000528280 VTNP04004 478 aa10.76□□□□□ -0.69
CHD7-208ENST00000528280 SKIP12755 728 aa10.76□□□□□ -0.69
CHD7-208ENST00000528280 XRCC6P12956 609 aaKnown RBP eCLIP10.76□□□□□ -0.69
CHD7-208ENST00000528280 RFC5P40937 340 aa10.76□□□□□ -0.69
CHD7-208ENST00000528280 MCM2P49736 904 aa10.76□□□□□ -0.69
CHD7-208ENST00000528280 NHLH1Q02575 133 aa10.76□□□□□ -0.69
CHD7-208ENST00000528280 NR5A1Q13285 461 aa10.76□□□□□ -0.69
CHD7-208ENST00000528280 RABEP1Q15276 862 aa10.76□□□□□ -0.69
CHD7-208ENST00000528280 CALCRLQ16602 461 aa10.76□□□□□ -0.69
CHD7-208ENST00000528280 C8orf34Q49A92 452 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms