RNA–Protein interactions for RNA: ENST00000528165.5

CAPN1-214, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 2,828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-214ENST00000528165 ITGB4P16144 1822 aa15.89■□□□□ 0.14
CAPN1-214ENST00000528165 IGF2BP3O00425 579 aaKnown RBP eCLIP15.89■□□□□ 0.13
CAPN1-214ENST00000528165 DDX3XO00571 662 aaKnown RBP eCLIP15.89■□□□□ 0.13
CAPN1-214ENST00000528165 CAMTA2O94983 1202 aa15.89■□□□□ 0.13
CAPN1-214ENST00000528165 HIBADHP31937 336 aaKnown RBP15.89■□□□□ 0.13
CAPN1-214ENST00000528165 ADCY7P51828 1080 aa15.89■□□□□ 0.13
CAPN1-214ENST00000528165 CAPRIN2Q6IMN6 1127 aaKnown RBP15.89■□□□□ 0.13
CAPN1-214ENST00000528165 DPY19L2P1Q6NXN4 242 aa15.89■□□□□ 0.13
CAPN1-214ENST00000528165 ZC3H3Q8IXZ2 948 aaKnown RBP15.89■□□□□ 0.13
CAPN1-214ENST00000528165 MICAL1Q8TDZ2 1067 aa15.89■□□□□ 0.13
CAPN1-214ENST00000528165 DYDC1Q8WWB3 177 aa15.89■□□□□ 0.13
CAPN1-214ENST00000528165 KLHL29Q96CT2 875 aa15.89■□□□□ 0.13
CAPN1-214ENST00000528165 TFCP2L1Q9NZI6 479 aa15.89■□□□□ 0.13
CAPN1-214ENST00000528165 JAG2Q9Y219 1238 aa15.89■□□□□ 0.13
CAPN1-214ENST00000528165 ATAD5Q96QE3 1844 aa15.89■□□□□ 0.13
CAPN1-214ENST00000528165 KRT18P05783 430 aaKnown RBP15.89■□□□□ 0.13
CAPN1-214ENST00000528165 XRCC5P13010 732 aaKnown RBP15.89■□□□□ 0.13
CAPN1-214ENST00000528165 GALCP54803 685 aa15.89■□□□□ 0.13
CAPN1-214ENST00000528165 DHX34Q14147 1143 aaKnown RBP15.89■□□□□ 0.13
CAPN1-214ENST00000528165 DCAF17Q5H9S7 520 aaPredicted RBP15.89■□□□□ 0.13
CAPN1-214ENST00000528165 TAOK1Q7L7X3 1001 aa15.89■□□□□ 0.13
CAPN1-214ENST00000528165 FRMD5Q7Z6J6 570 aa15.89■□□□□ 0.13
CAPN1-214ENST00000528165 JAMLQ86YT9 394 aa15.89■□□□□ 0.13
CAPN1-214ENST00000528165 GBP7Q8N8V2 638 aaPredicted RBP15.89■□□□□ 0.13
CAPN1-214ENST00000528165 CEP120Q8N960 986 aa15.89■□□□□ 0.13
CAPN1-214ENST00000528165 NT5C3AQ9H0P0 336 aa15.89■□□□□ 0.13
CAPN1-214ENST00000528165 OSGEPQ9NPF4 335 aa15.89■□□□□ 0.13
CAPN1-214ENST00000528165 CNOT7Q9UIV1 285 aaKnown RBP15.89■□□□□ 0.13
CAPN1-214ENST00000528165 USP15Q9Y4E8 981 aaPredicted RBP15.89■□□□□ 0.13
CAPN1-214ENST00000528165 NPHP3-ACAD11A0A0J9YXS1 232 aa15.88■□□□□ 0.13
CAPN1-214ENST00000528165 KRT13P13646 458 aa15.88■□□□□ 0.13
CAPN1-214ENST00000528165 SLCO1A2P46721 670 aa15.88■□□□□ 0.13
CAPN1-214ENST00000528165 TNNI2P48788 182 aa15.88■□□□□ 0.13
CAPN1-214ENST00000528165 AEBP2Q6ZN18 517 aaPredicted RBP15.88■□□□□ 0.13
CAPN1-214ENST00000528165 GPBP1Q86WP2 473 aa15.88■□□□□ 0.13
CAPN1-214ENST00000528165 UHMK1Q8TAS1 419 aaKnown RBP15.88■□□□□ 0.13
CAPN1-214ENST00000528165 EPS8L3Q8TE67 593 aaKnown RBP15.88■□□□□ 0.13
CAPN1-214ENST00000528165 IFT74Q96LB3 600 aa15.88■□□□□ 0.13
CAPN1-214ENST00000528165 ROBO3Q96MS0 1386 aa15.88■□□□□ 0.13
CAPN1-214ENST00000528165 CCDC87Q9NVE4 849 aa15.88■□□□□ 0.13
CAPN1-214ENST00000528165 PPP1R9AQ9ULJ8 1098 aa15.88■□□□□ 0.13
CAPN1-214ENST00000528165 KDM3AQ9Y4C1 1321 aa15.88■□□□□ 0.13
CAPN1-214ENST00000528165 E9PMD0 336 aa15.88■□□□□ 0.13
CAPN1-214ENST00000528165 SUN1O94901 812 aa15.88■□□□□ 0.13
CAPN1-214ENST00000528165 TCERG1LQ5VWI1 586 aa15.88■□□□□ 0.13
CAPN1-214ENST00000528165 PRCCQ92733 491 aaPredicted RBP15.88■□□□□ 0.13
CAPN1-214ENST00000528165 UBA5Q9GZZ9 404 aa15.88■□□□□ 0.13
CAPN1-214ENST00000528165 CARD9Q9H257 536 aa15.88■□□□□ 0.13
CAPN1-214ENST00000528165 ERVK-5Q9HDB9 667 aa15.88■□□□□ 0.13
CAPN1-214ENST00000528165 SPATS2LQ9NUQ6 558 aaKnown RBP15.88■□□□□ 0.13
CAPN1-214ENST00000528165 MTRF1LQ9UGC7 380 aaKnown RBP15.88■□□□□ 0.13
CAPN1-214ENST00000528165 KIAA0391O15091 583 aaKnown RBP15.87■□□□□ 0.13
CAPN1-214ENST00000528165 DDX3YO15523 660 aaKnown RBP15.87■□□□□ 0.13
CAPN1-214ENST00000528165 PLA2G4BP0C869 781 aa15.87■□□□□ 0.13
CAPN1-214ENST00000528165 RASA1P20936 1047 aa15.87■□□□□ 0.13
CAPN1-214ENST00000528165 PEX19P40855 299 aa15.87■□□□□ 0.13
CAPN1-214ENST00000528165 COPS2P61201 443 aa15.87■□□□□ 0.13
CAPN1-214ENST00000528165 MAP2K1Q02750 393 aaPredicted RBP15.87■□□□□ 0.13
CAPN1-214ENST00000528165 MAPK7Q13164 816 aa15.87■□□□□ 0.13
CAPN1-214ENST00000528165 CNGA2Q16280 664 aa15.87■□□□□ 0.13
CAPN1-214ENST00000528165 C11orf91Q3C1V1 193 aa15.87■□□□□ 0.13
CAPN1-214ENST00000528165 DCAF12L1Q5VU92 463 aa15.87■□□□□ 0.13
CAPN1-214ENST00000528165 ZDHHC24Q6UX98 284 aa15.87■□□□□ 0.13
CAPN1-214ENST00000528165 SLC35G2Q8TBE7 412 aa15.87■□□□□ 0.13
CAPN1-214ENST00000528165 SH3RF3Q8TEJ3 882 aaPredicted RBP15.87■□□□□ 0.13
CAPN1-214ENST00000528165 ZNF483Q8TF39 744 aaPredicted RBP15.87■□□□□ 0.13
CAPN1-214ENST00000528165 SAAL1Q96ER3 474 aa15.87■□□□□ 0.13
CAPN1-214ENST00000528165 ACSBG1Q96GR2 724 aa15.87■□□□□ 0.13
CAPN1-214ENST00000528165 SEMA4AQ9H3S1 761 aa15.87■□□□□ 0.13
CAPN1-214ENST00000528165 KIF9Q9HAQ2 790 aa15.87■□□□□ 0.13
CAPN1-214ENST00000528165 HOMER3Q9NSC5 361 aa15.87■□□□□ 0.13
CAPN1-214ENST00000528165 DDX25Q9UHL0 483 aaKnown RBP15.87■□□□□ 0.13
CAPN1-214ENST00000528165 KIAA1024Q9UPX6 916 aa15.87■□□□□ 0.13
CAPN1-214ENST00000528165 RPTORQ8N122 1335 aa15.87■□□□□ 0.13
CAPN1-214ENST00000528165 RASGRF2O14827 1237 aa15.87■□□□□ 0.13
CAPN1-214ENST00000528165 FERP16591 822 aa15.87■□□□□ 0.13
CAPN1-214ENST00000528165 SMARCA1P28370 1054 aa15.87■□□□□ 0.13
CAPN1-214ENST00000528165 DRG2P55039 364 aaKnown RBP15.87■□□□□ 0.13
CAPN1-214ENST00000528165 SARNPP82979 210 aaKnown RBP15.87■□□□□ 0.13
CAPN1-214ENST00000528165 CLUL1Q15846 466 aa15.87■□□□□ 0.13
CAPN1-214ENST00000528165 INTS5Q6P9B9 1019 aaKnown RBP15.87■□□□□ 0.13
CAPN1-214ENST00000528165 RFFLQ8WZ73 363 aa15.87■□□□□ 0.13
CAPN1-214ENST00000528165 GJA10Q969M2 543 aa15.87■□□□□ 0.13
CAPN1-214ENST00000528165 COA7Q96BR5 231 aa15.87■□□□□ 0.13
CAPN1-214ENST00000528165 ZNF287Q9HBT7 754 aa15.87■□□□□ 0.13
CAPN1-214ENST00000528165 SLC5A4Q9NY91 659 aa15.87■□□□□ 0.13
CAPN1-214ENST00000528165 PCDHA12Q9UN75 941 aa15.87■□□□□ 0.13
CAPN1-214ENST00000528165 STK38LQ9Y2H1 464 aa15.87■□□□□ 0.13
CAPN1-214ENST00000528165 hCG_1984214I3L0E3 225 aa15.86■□□□□ 0.13
CAPN1-214ENST00000528165 EDIL3O43854 480 aa15.86■□□□□ 0.13
CAPN1-214ENST00000528165 GFPT2O94808 682 aa15.86■□□□□ 0.13
CAPN1-214ENST00000528165 CDC25CP30307 473 aa15.86■□□□□ 0.13
CAPN1-214ENST00000528165 LACTBP83111 547 aaPredicted RBP15.86■□□□□ 0.13
CAPN1-214ENST00000528165 ZNF211Q13398 564 aaPredicted RBP15.86■□□□□ 0.13
CAPN1-214ENST00000528165 GALNTL6Q49A17 601 aa15.86■□□□□ 0.13
CAPN1-214ENST00000528165 SPTY2D1Q68D10 685 aaPredicted RBP15.86■□□□□ 0.13
CAPN1-214ENST00000528165 BTNL9Q6UXG8 535 aa15.86■□□□□ 0.13
CAPN1-214ENST00000528165 KIF2BQ8N4N8 673 aa15.86■□□□□ 0.13
CAPN1-214ENST00000528165 ZNF713Q8N859 430 aaPredicted RBP15.86■□□□□ 0.13
CAPN1-214ENST00000528165 CTNNBL1Q8WYA6 563 aaPredicted RBP15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms