RNA–Protein interactions for RNA: ENST00000528001.1

CNKSR1-211, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

TSL 4

Gene CNKSR1, Length 553 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-211ENST00000528001 USP28Q96RU2 1077 aa14.59□□□□□ -0.07
CNKSR1-211ENST00000528001 MMTAG2Q9BU76 263 aaKnown RBP14.59□□□□□ -0.07
CNKSR1-211ENST00000528001 FAM49AQ9H0Q0 323 aaPredicted RBP14.59□□□□□ -0.07
CNKSR1-211ENST00000528001 CLIC4Q9Y696 253 aa14.59□□□□□ -0.07
CNKSR1-211ENST00000528001 CDY2AQ9Y6F7 541 aa14.59□□□□□ -0.07
CNKSR1-211ENST00000528001 RANBP2P49792 3224 aaKnown RBP14.58□□□□□ -0.08
CNKSR1-211ENST00000528001 ASAP2O43150 1006 aa14.58□□□□□ -0.08
CNKSR1-211ENST00000528001 GPR32O75388 356 aa14.58□□□□□ -0.08
CNKSR1-211ENST00000528001 DDIT3P35638 169 aa14.58□□□□□ -0.08
CNKSR1-211ENST00000528001 POLGP54098 1239 aaPredicted RBP14.58□□□□□ -0.08
CNKSR1-211ENST00000528001 POU5F1BQ06416 359 aa14.58□□□□□ -0.08
CNKSR1-211ENST00000528001 SHHQ15465 462 aa14.58□□□□□ -0.08
CNKSR1-211ENST00000528001 XKR9Q5GH70 373 aa14.58□□□□□ -0.08
CNKSR1-211ENST00000528001 PLA2G4FQ68DD2 849 aa14.58□□□□□ -0.08
CNKSR1-211ENST00000528001 ZNF410Q86VK4 478 aa14.58□□□□□ -0.08
CNKSR1-211ENST00000528001 LINC00301Q8NCQ3 95 aa14.58□□□□□ -0.08
CNKSR1-211ENST00000528001 PHOSPHO2Q8TCD6 241 aa14.58□□□□□ -0.08
CNKSR1-211ENST00000528001 SEPT8Q92599 483 aa14.58□□□□□ -0.08
CNKSR1-211ENST00000528001 CCSER1Q9C0I3 900 aa14.58□□□□□ -0.08
CNKSR1-211ENST00000528001 FBXO2Q9UK22 296 aaPredicted RBP14.58□□□□□ -0.08
CNKSR1-211ENST00000528001 CFAP45Q9UL16 551 aa14.58□□□□□ -0.08
CNKSR1-211ENST00000528001 EYA4O95677 639 aa14.57□□□□□ -0.08
CNKSR1-211ENST00000528001 CTSHP09668 335 aa14.57□□□□□ -0.08
CNKSR1-211ENST00000528001 ACRP10323 421 aa14.57□□□□□ -0.08
CNKSR1-211ENST00000528001 CLCN3P51790 818 aa14.57□□□□□ -0.08
CNKSR1-211ENST00000528001 NPEPPSP55786 919 aa14.57□□□□□ -0.08
CNKSR1-211ENST00000528001 NUCB2P80303 420 aa14.57□□□□□ -0.08
CNKSR1-211ENST00000528001 MKRN4PQ13434 485 aaPredicted RBP14.57□□□□□ -0.08
CNKSR1-211ENST00000528001 PKP1Q13835 747 aa14.57□□□□□ -0.08
CNKSR1-211ENST00000528001 IKBKEQ14164 716 aa14.57□□□□□ -0.08
CNKSR1-211ENST00000528001 HABP4Q5JVS0 413 aaKnown RBP14.57□□□□□ -0.08
CNKSR1-211ENST00000528001 C9orf50Q5SZB4 431 aa14.57□□□□□ -0.08
CNKSR1-211ENST00000528001 FAM173BQ6P4H8 233 aa14.57□□□□□ -0.08
CNKSR1-211ENST00000528001 POTEGQ6S5H5 508 aa14.57□□□□□ -0.08
CNKSR1-211ENST00000528001 TRMT1LQ7Z2T5 733 aaKnown RBP14.57□□□□□ -0.08
CNKSR1-211ENST00000528001 DEFB128Q7Z7B8 93 aa14.57□□□□□ -0.08
CNKSR1-211ENST00000528001 ZNF579Q8NAF0 562 aaKnown RBP14.57□□□□□ -0.08
CNKSR1-211ENST00000528001 SPRYD3Q8NCJ5 442 aa14.57□□□□□ -0.08
CNKSR1-211ENST00000528001 MCPH1Q8NEM0 835 aa14.57□□□□□ -0.08
CNKSR1-211ENST00000528001 ZBTB10Q96DT7 871 aa14.57□□□□□ -0.08
CNKSR1-211ENST00000528001 RNPC3Q96LT9 517 aaKnown RBP14.57□□□□□ -0.08
CNKSR1-211ENST00000528001 CCDC43Q96MW1 224 aaKnown RBP14.57□□□□□ -0.08
CNKSR1-211ENST00000528001 MTRQ99707 1265 aa14.57□□□□□ -0.08
CNKSR1-211ENST00000528001 FTHL17Q9BXU8 183 aa14.57□□□□□ -0.08
CNKSR1-211ENST00000528001 IFIH1Q9BYX4 1025 aaKnown RBP14.57□□□□□ -0.08
CNKSR1-211ENST00000528001 FTOQ9C0B1 505 aaKnown RBP eCLIP14.57□□□□□ -0.08
CNKSR1-211ENST00000528001 ADAMTS10Q9H324 1103 aa14.57□□□□□ -0.08
CNKSR1-211ENST00000528001 ATP6V0A4Q9HBG4 840 aa14.57□□□□□ -0.08
CNKSR1-211ENST00000528001 DAXXQ9UER7 740 aaPredicted RBP14.57□□□□□ -0.08
CNKSR1-211ENST00000528001 DNM3Q9UQ16 869 aa14.57□□□□□ -0.08
CNKSR1-211ENST00000528001 AKT3Q9Y243 479 aa14.57□□□□□ -0.08
CNKSR1-211ENST00000528001 MYH15Q9Y2K3 1946 aa14.56□□□□□ -0.08
CNKSR1-211ENST00000528001 TMEM150BA6NC51 233 aa14.56□□□□□ -0.08
CNKSR1-211ENST00000528001 ZBTB39O15060 712 aa14.56□□□□□ -0.08
CNKSR1-211ENST00000528001 UBA7P41226 1012 aa14.56□□□□□ -0.08
CNKSR1-211ENST00000528001 GPC3P51654 580 aa14.56□□□□□ -0.08
CNKSR1-211ENST00000528001 MXD4Q14582 209 aaPredicted RBP14.56□□□□□ -0.08
CNKSR1-211ENST00000528001 LPIN1Q14693 890 aa14.56□□□□□ -0.08
CNKSR1-211ENST00000528001 EMC2Q15006 297 aa14.56□□□□□ -0.08
CNKSR1-211ENST00000528001 PCBP1Q15365 356 aaKnown RBP eCLIP14.56□□□□□ -0.08
CNKSR1-211ENST00000528001 ECM1Q16610 540 aa14.56□□□□□ -0.08
CNKSR1-211ENST00000528001 GPR153Q6NV75 609 aa14.56□□□□□ -0.08
CNKSR1-211ENST00000528001 LRRC71Q8N4P6 559 aa14.56□□□□□ -0.08
CNKSR1-211ENST00000528001 KRI1Q8N9T8 703 aaKnown RBP14.56□□□□□ -0.08
CNKSR1-211ENST00000528001 KCNG4Q8TDN1 519 aa14.56□□□□□ -0.08
CNKSR1-211ENST00000528001 PIGOQ8TEQ8 1089 aa14.56□□□□□ -0.08
CNKSR1-211ENST00000528001 PSPC1Q8WXF1 523 aaKnown RBP14.56□□□□□ -0.08
CNKSR1-211ENST00000528001 SLC9A7Q96T83 725 aa14.56□□□□□ -0.08
CNKSR1-211ENST00000528001 TIPINQ9BVW5 301 aa14.56□□□□□ -0.08
CNKSR1-211ENST00000528001 INO80BQ9C086 356 aaPredicted RBP14.56□□□□□ -0.08
CNKSR1-211ENST00000528001 SUGCTQ9HAC7 445 aa14.56□□□□□ -0.08
CNKSR1-211ENST00000528001 KCND2Q9NZV8 630 aa14.56□□□□□ -0.08
CNKSR1-211ENST00000528001 SUCLA2Q9P2R7 463 aaPredicted RBP14.56□□□□□ -0.08
CNKSR1-211ENST00000528001 KIAA1024Q9UPX6 916 aa14.56□□□□□ -0.08
CNKSR1-211ENST00000528001 ZDHHC9Q9Y397 364 aa14.56□□□□□ -0.08
CNKSR1-211ENST00000528001 ARID2Q68CP9 1835 aa14.56□□□□□ -0.08
CNKSR1-211ENST00000528001 LOXHD1Q8IVV2 1947 aa14.56□□□□□ -0.08
CNKSR1-211ENST00000528001 GPR182O15218 404 aa14.55□□□□□ -0.08
CNKSR1-211ENST00000528001 SPTLC2O15270 562 aa14.55□□□□□ -0.08
CNKSR1-211ENST00000528001 CYP11B2P19099 503 aa14.55□□□□□ -0.08
CNKSR1-211ENST00000528001 ANP32AP39687 249 aaKnown RBP14.55□□□□□ -0.08
CNKSR1-211ENST00000528001 NLRP11P59045 1033 aaKnown RBP14.55□□□□□ -0.08
CNKSR1-211ENST00000528001 SMAD3P84022 425 aaKnown RBP14.55□□□□□ -0.08
CNKSR1-211ENST00000528001 STK38Q15208 465 aa14.55□□□□□ -0.08
CNKSR1-211ENST00000528001 TMEM119Q4V9L6 283 aa14.55□□□□□ -0.08
CNKSR1-211ENST00000528001 CABP7Q86V35 215 aa14.55□□□□□ -0.08
CNKSR1-211ENST00000528001 IFNLR1Q8IU57 520 aaPredicted RBP14.55□□□□□ -0.08
CNKSR1-211ENST00000528001 DBF4BQ8NFT6 615 aa14.55□□□□□ -0.08
CNKSR1-211ENST00000528001 CALML4Q96GE6 196 aa14.55□□□□□ -0.08
CNKSR1-211ENST00000528001 NFKBIZQ9BYH8 718 aa14.55□□□□□ -0.08
CNKSR1-211ENST00000528001 XPNPEP1Q9NQW7 623 aa14.55□□□□□ -0.08
CNKSR1-211ENST00000528001 DDX19AQ9NUU7 478 aaKnown RBP14.55□□□□□ -0.08
CNKSR1-211ENST00000528001 CIZ1Q9ULV3 898 aaPredicted RBP14.55□□□□□ -0.08
CNKSR1-211ENST00000528001 SIP14410 1827 aa14.55□□□□□ -0.08
CNKSR1-211ENST00000528001 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.54□□□□□ -0.08
CNKSR1-211ENST00000528001 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.54□□□□□ -0.08
CNKSR1-211ENST00000528001 ARHGEF35A5YM69 484 aa14.54□□□□□ -0.08
CNKSR1-211ENST00000528001 PP2D1A8MPX8 630 aa14.54□□□□□ -0.08
CNKSR1-211ENST00000528001 VTNP04004 478 aa14.54□□□□□ -0.08
CNKSR1-211ENST00000528001 GHRP10912 638 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms