RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 LRFN2Q9ULH4 789 aa16.33■□□□□ 0.21
USP47-207ENST00000527733 KCPQ6ZWJ8 1503 aa16.33■□□□□ 0.21
USP47-207ENST00000527733 STK10O94804 968 aaKnown RBP16.33■□□□□ 0.2
USP47-207ENST00000527733 GAS8O95995 478 aa16.33■□□□□ 0.2
USP47-207ENST00000527733 ANKRD40Q6AI12 368 aa16.33■□□□□ 0.2
USP47-207ENST00000527733 HDXQ7Z353 690 aa16.33■□□□□ 0.2
USP47-207ENST00000527733 RDM1Q8NG50 284 aa16.33■□□□□ 0.2
USP47-207ENST00000527733 HPS3Q969F9 1004 aa16.33■□□□□ 0.2
USP47-207ENST00000527733 ZNF653Q96CK0 615 aa16.33■□□□□ 0.2
USP47-207ENST00000527733 POLR3CQ9BUI4 534 aaPredicted RBP16.33■□□□□ 0.2
USP47-207ENST00000527733 IQCGQ9H095 443 aaKnown RBP16.33■□□□□ 0.2
USP47-207ENST00000527733 TLDC2A0PJX2 215 aa16.33■□□□□ 0.2
USP47-207ENST00000527733 SMIM22K7EJ46 135 aa16.33■□□□□ 0.2
USP47-207ENST00000527733 CXCL11O14625 94 aa16.33■□□□□ 0.2
USP47-207ENST00000527733 RNASELQ05823 741 aaKnown RBP16.33■□□□□ 0.2
USP47-207ENST00000527733 C10orf76Q5T2E6 689 aa16.33■□□□□ 0.2
USP47-207ENST00000527733 ELOA2Q8IYF1 753 aaPredicted RBP16.33■□□□□ 0.2
USP47-207ENST00000527733 NPHP3-ACAD11A0A0J9YXS1 232 aa16.33■□□□□ 0.2
USP47-207ENST00000527733 ARHGEF37A1IGU5 675 aa16.33■□□□□ 0.2
USP47-207ENST00000527733 E7EVH7 732 aa16.33■□□□□ 0.2
USP47-207ENST00000527733 VAMP7P51809 220 aa16.33■□□□□ 0.2
USP47-207ENST00000527733 STK4Q13043 487 aa16.33■□□□□ 0.2
USP47-207ENST00000527733 MAP1SQ66K74 1059 aaPredicted RBP16.33■□□□□ 0.2
USP47-207ENST00000527733 SCYL2Q6P3W7 929 aa16.33■□□□□ 0.2
USP47-207ENST00000527733 RAB20Q9NX57 234 aa16.33■□□□□ 0.2
USP47-207ENST00000527733 CEP72Q9P209 647 aa16.33■□□□□ 0.2
USP47-207ENST00000527733 DNAJC12Q9UKB3 198 aa16.33■□□□□ 0.2
USP47-207ENST00000527733 COMMD10Q9Y6G5 202 aa16.33■□□□□ 0.2
USP47-207ENST00000527733 CD58P19256 250 aa16.32■□□□□ 0.2
USP47-207ENST00000527733 GCLCP48506 637 aaPredicted RBP16.32■□□□□ 0.2
USP47-207ENST00000527733 EHHADHQ08426 723 aa16.32■□□□□ 0.2
USP47-207ENST00000527733 MKL1Q969V6 931 aa16.32■□□□□ 0.2
USP47-207ENST00000527733 DYNC1LI2O43237 492 aaPredicted RBP16.32■□□□□ 0.2
USP47-207ENST00000527733 CYP2B6P20813 491 aa16.32■□□□□ 0.2
USP47-207ENST00000527733 KIF11P52732 1056 aa16.32■□□□□ 0.2
USP47-207ENST00000527733 PTPROQ16827 1216 aa16.32■□□□□ 0.2
USP47-207ENST00000527733 ZNF667Q5HYK9 610 aa16.32■□□□□ 0.2
USP47-207ENST00000527733 METTL23Q86XA0 190 aa16.32■□□□□ 0.2
USP47-207ENST00000527733 ACRBPQ8NEB7 543 aa16.32■□□□□ 0.2
USP47-207ENST00000527733 GCOM2Q9BZD3 368 aaPredicted RBP16.32■□□□□ 0.2
USP47-207ENST00000527733 ADAMTS1Q9UHI8 967 aa16.32■□□□□ 0.2
USP47-207ENST00000527733 PITPNM2Q9BZ72 1349 aa16.32■□□□□ 0.2
USP47-207ENST00000527733 MED7O43513 233 aa16.32■□□□□ 0.2
USP47-207ENST00000527733 SREBF2Q12772 1141 aa16.32■□□□□ 0.2
USP47-207ENST00000527733 ELF2Q15723 593 aa16.32■□□□□ 0.2
USP47-207ENST00000527733 USP50Q70EL3 339 aaPredicted RBP16.32■□□□□ 0.2
USP47-207ENST00000527733 SLC35F6Q8N357 371 aa16.32■□□□□ 0.2
USP47-207ENST00000527733 PROCA1Q8NCQ7 364 aaPredicted RBP16.32■□□□□ 0.2
USP47-207ENST00000527733 MROH8Q9H579 483 aa16.32■□□□□ 0.2
USP47-207ENST00000527733 BAZ2BQ9UIF8 2168 aaKnown RBP16.32■□□□□ 0.2
USP47-207ENST00000527733 AHDC1Q5TGY3 1603 aaPredicted RBP16.32■□□□□ 0.2
USP47-207ENST00000527733 MESDQ14696 234 aa16.31■□□□□ 0.2
USP47-207ENST00000527733 CATSPER3Q86XQ3 398 aa16.31■□□□□ 0.2
USP47-207ENST00000527733 RNF149Q8NC42 400 aa16.31■□□□□ 0.2
USP47-207ENST00000527733 SPTLC3Q9NUV7 552 aa16.31■□□□□ 0.2
USP47-207ENST00000527733 TXNDC16Q9P2K2 825 aa16.31■□□□□ 0.2
USP47-207ENST00000527733 PRKCEQ02156 737 aa16.31■□□□□ 0.2
USP47-207ENST00000527733 CYP27A1Q02318 531 aa16.31■□□□□ 0.2
USP47-207ENST00000527733 TWF2Q6IBS0 349 aaKnown RBP16.31■□□□□ 0.2
USP47-207ENST00000527733 ZNF668Q96K58 619 aaPredicted RBP16.31■□□□□ 0.2
USP47-207ENST00000527733 PCDHAC2Q9Y5I4 1007 aa16.31■□□□□ 0.2
USP47-207ENST00000527733 IQCB1Q15051 598 aa16.31■□□□□ 0.2
USP47-207ENST00000527733 ALKBH5Q6P6C2 394 aaKnown RBP16.31■□□□□ 0.2
USP47-207ENST00000527733 RASGRP2Q7LDG7 609 aa16.31■□□□□ 0.2
USP47-207ENST00000527733 UBLCP1Q8WVY7 318 aaPredicted RBP16.31■□□□□ 0.2
USP47-207ENST00000527733 IL17RAQ96F46 866 aa16.31■□□□□ 0.2
USP47-207ENST00000527733 ANKEF1Q9NU02 776 aa16.31■□□□□ 0.2
USP47-207ENST00000527733 ADM5C9JUS6 153 aa16.31■□□□□ 0.2
USP47-207ENST00000527733 KRIT1O00522 736 aa16.31■□□□□ 0.2
USP47-207ENST00000527733 NFIBO00712 420 aa16.31■□□□□ 0.2
USP47-207ENST00000527733 PAK2Q13177 524 aa16.31■□□□□ 0.2
USP47-207ENST00000527733 ZNF746Q6NUN9 644 aaPredicted RBP16.31■□□□□ 0.2
USP47-207ENST00000527733 FRMD5Q7Z6J6 570 aa16.31■□□□□ 0.2
USP47-207ENST00000527733 GLIS2Q9BZE0 524 aaPredicted RBP16.31■□□□□ 0.2
USP47-207ENST00000527733 TEX33O43247 280 aa16.3■□□□□ 0.2
USP47-207ENST00000527733 DSG3P32926 999 aa16.3■□□□□ 0.2
USP47-207ENST00000527733 CCDC14Q49A88 953 aa16.3■□□□□ 0.2
USP47-207ENST00000527733 OTUD6BQ8N6M0 293 aa16.3■□□□□ 0.2
USP47-207ENST00000527733 RAET1EQ8TD07 263 aa16.3■□□□□ 0.2
USP47-207ENST00000527733 OPTNQ96CV9 577 aa16.3■□□□□ 0.2
USP47-207ENST00000527733 SAAL1Q96ER3 474 aa16.3■□□□□ 0.2
USP47-207ENST00000527733 NUDT12Q9BQG2 462 aa16.3■□□□□ 0.2
USP47-207ENST00000527733 AGO2Q9UKV8 859 aaKnown RBP16.3■□□□□ 0.2
USP47-207ENST00000527733 MXD4Q14582 209 aaPredicted RBP16.3■□□□□ 0.2
USP47-207ENST00000527733 KRT39Q6A163 491 aa16.3■□□□□ 0.2
USP47-207ENST00000527733 ARFGAP2Q8N6H7 521 aa16.3■□□□□ 0.2
USP47-207ENST00000527733 A0A1W2PQC6 194 aa16.29■□□□□ 0.2
USP47-207ENST00000527733 CYTH3O43739 400 aa16.29■□□□□ 0.2
USP47-207ENST00000527733 PLS3P13797 630 aa16.29■□□□□ 0.2
USP47-207ENST00000527733 RAB17Q9H0T7 212 aa16.29■□□□□ 0.2
USP47-207ENST00000527733 MRPL47Q9HD33 250 aaKnown RBP16.29■□□□□ 0.2
USP47-207ENST00000527733 ABHD10Q9NUJ1 306 aa16.29■□□□□ 0.2
USP47-207ENST00000527733 MAGEB2O15479 319 aa16.29■□□□□ 0.2
USP47-207ENST00000527733 FMR1Q06787 632 aaKnown RBP eCLIP16.29■□□□□ 0.21e-9■■■■■ 27.7
USP47-207ENST00000527733 PPFIA1Q13136 1202 aa16.29■□□□□ 0.2
USP47-207ENST00000527733 KRT81Q14533 505 aa16.29■□□□□ 0.2
USP47-207ENST00000527733 ARID5BQ14865 1188 aa16.29■□□□□ 0.2
USP47-207ENST00000527733 SCARA5Q6ZMJ2 495 aa16.29■□□□□ 0.2
USP47-207ENST00000527733 GPD1LQ8N335 351 aa16.29■□□□□ 0.2
USP47-207ENST00000527733 PPP1R14CQ8TAE6 165 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms