RNA–Protein interactions for RNA: ENST00000527680.1

TRAPPC4-208, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 569 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-208ENST00000527680 AKT3Q9Y243 479 aa25.31■■□□□ 1.64
TRAPPC4-208ENST00000527680 HCN4Q9Y3Q4 1203 aa25.31■■□□□ 1.64
TRAPPC4-208ENST00000527680 PCDHB12Q9Y5F1 795 aa25.31■■□□□ 1.64
TRAPPC4-208ENST00000527680 NID2Q14112 1375 aa25.31■■□□□ 1.64
TRAPPC4-208ENST00000527680 ALADP13716 330 aa25.3■■□□□ 1.64
TRAPPC4-208ENST00000527680 USP11P51784 963 aa25.3■■□□□ 1.64
TRAPPC4-208ENST00000527680 DLX2Q07687 328 aaPredicted RBP25.3■■□□□ 1.64
TRAPPC4-208ENST00000527680 CAMK1Q14012 370 aa25.3■■□□□ 1.64
TRAPPC4-208ENST00000527680 MAP7D2Q96T17 732 aa25.3■■□□□ 1.64
TRAPPC4-208ENST00000527680 SH3GLB2Q9NR46 395 aa25.3■■□□□ 1.64
TRAPPC4-208ENST00000527680 CPLX1O14810 134 aa25.29■■□□□ 1.64
TRAPPC4-208ENST00000527680 CHMP2AO43633 222 aa25.29■■□□□ 1.64
TRAPPC4-208ENST00000527680 GAS7O60861 476 aa25.29■■□□□ 1.64
TRAPPC4-208ENST00000527680 DNAJB1P25685 340 aa25.29■■□□□ 1.64
TRAPPC4-208ENST00000527680 NDUFV1P49821 464 aa25.29■■□□□ 1.64
TRAPPC4-208ENST00000527680 CLCN3P51790 818 aa25.29■■□□□ 1.64
TRAPPC4-208ENST00000527680 NLRP11P59045 1033 aaKnown RBP25.29■■□□□ 1.64
TRAPPC4-208ENST00000527680 FAM102BQ5T8I3 360 aa25.29■■□□□ 1.64
TRAPPC4-208ENST00000527680 ATP6V0A4Q9HBG4 840 aa25.29■■□□□ 1.64
TRAPPC4-208ENST00000527680 PRKAG3Q9UGI9 489 aa25.29■■□□□ 1.64
TRAPPC4-208ENST00000527680 CYP46A1Q9Y6A2 500 aa25.29■■□□□ 1.64
TRAPPC4-208ENST00000527680 MSH4O15457 936 aa25.28■■□□□ 1.64
TRAPPC4-208ENST00000527680 LINC01565O15544 149 aa25.28■■□□□ 1.64
TRAPPC4-208ENST00000527680 GPR32O75388 356 aa25.28■■□□□ 1.64
TRAPPC4-208ENST00000527680 EVCP57679 992 aa25.28■■□□□ 1.64
TRAPPC4-208ENST00000527680 ADAM15Q13444 863 aa25.28■■□□□ 1.64
TRAPPC4-208ENST00000527680 RBM23Q86U06 439 aaKnown RBP25.28■■□□□ 1.64
TRAPPC4-208ENST00000527680 FAM228AQ86W67 206 aa25.28■■□□□ 1.64
TRAPPC4-208ENST00000527680 LENG9Q96B70 501 aa25.28■■□□□ 1.64
TRAPPC4-208ENST00000527680 LARP6Q9BRS8 491 aaKnown RBP25.28■■□□□ 1.64
TRAPPC4-208ENST00000527680 TEKT3Q9BXF9 490 aa25.28■■□□□ 1.64
TRAPPC4-208ENST00000527680 C9IYK1 514 aa25.27■■□□□ 1.64
TRAPPC4-208ENST00000527680 ZSCAN20P17040 1043 aaPredicted RBP25.27■■□□□ 1.64
TRAPPC4-208ENST00000527680 IRS1P35568 1242 aa25.27■■□□□ 1.64
TRAPPC4-208ENST00000527680 LRCH2Q5VUJ6 765 aa25.27■■□□□ 1.64
TRAPPC4-208ENST00000527680 ADHFE1Q8IWW8 467 aa25.27■■□□□ 1.64
TRAPPC4-208ENST00000527680 LRRC71Q8N4P6 559 aa25.27■■□□□ 1.64
TRAPPC4-208ENST00000527680 TBCKQ8TEA7 893 aa25.27■■□□□ 1.64
TRAPPC4-208ENST00000527680 SCLT1Q96NL6 688 aa25.27■■□□□ 1.64
TRAPPC4-208ENST00000527680 RIT2Q99578 217 aa25.27■■□□□ 1.64
TRAPPC4-208ENST00000527680 C22orf23Q9BZE7 217 aa25.27■■□□□ 1.64
TRAPPC4-208ENST00000527680 ZSWIM6Q9HCJ5 1215 aa25.27■■□□□ 1.64
TRAPPC4-208ENST00000527680 C11orf16Q9NQ32 467 aa25.27■■□□□ 1.64
TRAPPC4-208ENST00000527680 CD207Q9UJ71 328 aa25.27■■□□□ 1.64
TRAPPC4-208ENST00000527680 ATG2AQ2TAZ0 1938 aa25.27■■□□□ 1.64
TRAPPC4-208ENST00000527680 OATP04181 439 aa25.26■■□□□ 1.63
TRAPPC4-208ENST00000527680 SFNP31947 248 aa25.26■■□□□ 1.63
TRAPPC4-208ENST00000527680 NRIP1P48552 1158 aa25.26■■□□□ 1.63
TRAPPC4-208ENST00000527680 ZP2Q05996 745 aa25.26■■□□□ 1.63
TRAPPC4-208ENST00000527680 TOB2Q14106 344 aaPredicted RBP25.26■■□□□ 1.63
TRAPPC4-208ENST00000527680 CSPP1Q1MSJ5 1256 aa25.26■■□□□ 1.63
TRAPPC4-208ENST00000527680 ZNF668Q96K58 619 aaPredicted RBP25.26■■□□□ 1.63
TRAPPC4-208ENST00000527680 UPF3BQ9BZI7 483 aaKnown RBP25.26■■□□□ 1.63
TRAPPC4-208ENST00000527680 TYW1Q9NV66 732 aaKnown RBP25.26■■□□□ 1.63
TRAPPC4-208ENST00000527680 TMEM161AQ9NX61 479 aa25.26■■□□□ 1.63
TRAPPC4-208ENST00000527680 PCDHA4Q9UN74 947 aa25.26■■□□□ 1.63
TRAPPC4-208ENST00000527680 KIAA1671Q9BY89 1806 aa25.26■■□□□ 1.63
TRAPPC4-208ENST00000527680 MBTPS2O43462 519 aa25.25■■□□□ 1.63
TRAPPC4-208ENST00000527680 FGFR1P11362 822 aa25.25■■□□□ 1.63
TRAPPC4-208ENST00000527680 PLA2G5P39877 138 aa25.25■■□□□ 1.63
TRAPPC4-208ENST00000527680 JAK3P52333 1124 aa25.25■■□□□ 1.63
TRAPPC4-208ENST00000527680 PRKCEQ02156 737 aa25.25■■□□□ 1.63
TRAPPC4-208ENST00000527680 STK3Q13188 491 aa25.25■■□□□ 1.63
TRAPPC4-208ENST00000527680 SMAD2Q15796 467 aaKnown RBP25.25■■□□□ 1.63
TRAPPC4-208ENST00000527680 CPLX2Q6PUV4 134 aaKnown RBP25.25■■□□□ 1.63
TRAPPC4-208ENST00000527680 ADGRD2Q7Z7M1 963 aa25.25■■□□□ 1.63
TRAPPC4-208ENST00000527680 THNSL1Q8IYQ7 743 aa25.25■■□□□ 1.63
TRAPPC4-208ENST00000527680 SLC5A5Q92911 643 aa25.25■■□□□ 1.63
TRAPPC4-208ENST00000527680 GJA10Q969M2 543 aa25.25■■□□□ 1.63
TRAPPC4-208ENST00000527680 TLE6Q9H808 572 aa25.25■■□□□ 1.63
TRAPPC4-208ENST00000527680 ZNF862O60290 1169 aa25.24■■□□□ 1.63
TRAPPC4-208ENST00000527680 TBX10O75333 385 aa25.24■■□□□ 1.63
TRAPPC4-208ENST00000527680 DEXIO95424 95 aa25.24■■□□□ 1.63
TRAPPC4-208ENST00000527680 FAM189BP81408 668 aa25.24■■□□□ 1.63
TRAPPC4-208ENST00000527680 TBC1D8BQ0IIM8 1120 aa25.24■■□□□ 1.63
TRAPPC4-208ENST00000527680 SMAD4Q13485 552 aaKnown RBP25.24■■□□□ 1.63
TRAPPC4-208ENST00000527680 MIER3Q7Z3K6 550 aa25.24■■□□□ 1.63
TRAPPC4-208ENST00000527680 ZNF710Q8N1W2 664 aa25.24■■□□□ 1.63
TRAPPC4-208ENST00000527680 ZNF274Q96GC6 653 aaPredicted RBP25.24■■□□□ 1.63
TRAPPC4-208ENST00000527680 UNC45AQ9H3U1 944 aa25.24■■□□□ 1.63
TRAPPC4-208ENST00000527680 WDR81Q562E7 1941 aa25.24■■□□□ 1.63
TRAPPC4-208ENST00000527680 DCXO43602 365 aa25.23■■□□□ 1.63
TRAPPC4-208ENST00000527680 EDIL3O43854 480 aa25.23■■□□□ 1.63
TRAPPC4-208ENST00000527680 EIF4BP23588 611 aaKnown RBP25.23■■□□□ 1.63
TRAPPC4-208ENST00000527680 ABI1Q8IZP0 508 aa25.23■■□□□ 1.63
TRAPPC4-208ENST00000527680 BLIDQ8IZY5 108 aa25.23■■□□□ 1.63
TRAPPC4-208ENST00000527680 EFHBQ8N7U6 833 aa25.23■■□□□ 1.63
TRAPPC4-208ENST00000527680 POP1Q99575 1024 aaKnown RBP25.23■■□□□ 1.63
TRAPPC4-208ENST00000527680 ELAC1Q9H777 363 aaKnown RBP25.23■■□□□ 1.63
TRAPPC4-208ENST00000527680 FNDC1Q4ZHG4 1894 aaPredicted RBP25.23■■□□□ 1.63
TRAPPC4-208ENST00000527680 EPB41L2O43491 1005 aaKnown RBP25.22■■□□□ 1.63
TRAPPC4-208ENST00000527680 FGF18O76093 207 aa25.22■■□□□ 1.63
TRAPPC4-208ENST00000527680 UBE3AQ05086 875 aa25.22■■□□□ 1.63
TRAPPC4-208ENST00000527680 DSC3Q14574 896 aa25.22■■□□□ 1.63
TRAPPC4-208ENST00000527680 UGCGQ16739 394 aa25.22■■□□□ 1.63
TRAPPC4-208ENST00000527680 Q4G0T1 1027 aa25.22■■□□□ 1.63
TRAPPC4-208ENST00000527680 COLGALT1Q8NBJ5 622 aa25.22■■□□□ 1.63
TRAPPC4-208ENST00000527680 RNF169Q8NCN4 708 aa25.22■■□□□ 1.63
TRAPPC4-208ENST00000527680 NLRP7Q8WX94 980 aa25.22■■□□□ 1.63
TRAPPC4-208ENST00000527680 ADAMTS10Q9H324 1103 aa25.22■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms