RNA–Protein interactions for RNA: ENST00000527421.5

UBXN1-208, Transcript of UBX domain protein 1, humanhuman

TSL 5

Gene UBXN1, Length 1,085 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-208ENST00000527421 HTRA4P83105 476 aaPredicted RBP20.93■□□□□ 0.94
UBXN1-208ENST00000527421 TMEM266Q2M3C6 531 aa20.93■□□□□ 0.94
UBXN1-208ENST00000527421 ODR4Q5SWX8 454 aa20.93■□□□□ 0.94
UBXN1-208ENST00000527421 ZNF710Q8N1W2 664 aa20.93■□□□□ 0.94
UBXN1-208ENST00000527421 ARNTL2Q8WYA1 636 aa20.93■□□□□ 0.94
UBXN1-208ENST00000527421 YME1L1Q96TA2 773 aa20.93■□□□□ 0.94
UBXN1-208ENST00000527421 OSMRQ99650 979 aa20.93■□□□□ 0.94
UBXN1-208ENST00000527421 TTC12Q9H892 705 aaPredicted RBP20.93■□□□□ 0.94
UBXN1-208ENST00000527421 CERS4Q9HA82 394 aa20.93■□□□□ 0.94
UBXN1-208ENST00000527421 COL4A4P53420 1690 aaPredicted RBP20.93■□□□□ 0.94
UBXN1-208ENST00000527421 ARID2Q68CP9 1835 aa20.92■□□□□ 0.94
UBXN1-208ENST00000527421 GPR32O75388 356 aa20.92■□□□□ 0.94
UBXN1-208ENST00000527421 TXKP42681 527 aa20.92■□□□□ 0.94
UBXN1-208ENST00000527421 NFX1Q12986 1120 aaKnown RBP20.92■□□□□ 0.94
UBXN1-208ENST00000527421 ORC2Q13416 577 aaPredicted RBP20.92■□□□□ 0.94
UBXN1-208ENST00000527421 PLA2G4FQ68DD2 849 aa20.92■□□□□ 0.94
UBXN1-208ENST00000527421 ANO5Q75V66 913 aa20.92■□□□□ 0.94
UBXN1-208ENST00000527421 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.92■□□□□ 0.94
UBXN1-208ENST00000527421 TMEM40Q8WWA1 233 aa20.92■□□□□ 0.94
UBXN1-208ENST00000527421 LINC01599Q8WXQ3 324 aa20.92■□□□□ 0.94
UBXN1-208ENST00000527421 MTMR9Q96QG7 549 aa20.92■□□□□ 0.94
UBXN1-208ENST00000527421 SH2D3AQ9BRG2 576 aa20.92■□□□□ 0.94
UBXN1-208ENST00000527421 CDHR5Q9HBB8 845 aa20.92■□□□□ 0.94
UBXN1-208ENST00000527421 NOL7Q9UMY1 257 aaKnown RBP20.92■□□□□ 0.94
UBXN1-208ENST00000527421 NOC2LQ9Y3T9 749 aaKnown RBP20.92■□□□□ 0.94
UBXN1-208ENST00000527421 GTF3C3Q9Y5Q9 886 aa20.92■□□□□ 0.94
UBXN1-208ENST00000527421 LINC01553A4QN01 128 aa20.91■□□□□ 0.94
UBXN1-208ENST00000527421 ENPP3O14638 875 aa20.91■□□□□ 0.94
UBXN1-208ENST00000527421 IGFBP4P22692 258 aa20.91■□□□□ 0.94
UBXN1-208ENST00000527421 TRAPPC10P48553 1259 aa20.91■□□□□ 0.94
UBXN1-208ENST00000527421 NLRP11P59045 1033 aaKnown RBP20.91■□□□□ 0.94
UBXN1-208ENST00000527421 CYP4A11Q02928 519 aa20.91■□□□□ 0.94
UBXN1-208ENST00000527421 ADGRE1Q14246 886 aa20.91■□□□□ 0.94
UBXN1-208ENST00000527421 TTC38Q5R3I4 469 aa20.91■□□□□ 0.94
UBXN1-208ENST00000527421 FAM43BQ6ZT52 329 aaPredicted RBP20.91■□□□□ 0.94
UBXN1-208ENST00000527421 C4orf19Q8IY42 314 aa20.91■□□□□ 0.94
UBXN1-208ENST00000527421 NEK9Q8TD19 979 aa20.91■□□□□ 0.94
UBXN1-208ENST00000527421 SP7Q8TDD2 431 aaPredicted RBP20.91■□□□□ 0.94
UBXN1-208ENST00000527421 DYDC2Q96IM9 177 aa20.91■□□□□ 0.94
UBXN1-208ENST00000527421 SCLT1Q96NL6 688 aa20.91■□□□□ 0.94
UBXN1-208ENST00000527421 CEP89Q96ST8 783 aa20.91■□□□□ 0.94
UBXN1-208ENST00000527421 JPH2Q9BR39 696 aaPredicted RBP20.91■□□□□ 0.94
UBXN1-208ENST00000527421 TSPYL2Q9H2G4 693 aaPredicted RBP20.91■□□□□ 0.94
UBXN1-208ENST00000527421 TMEM60Q9H2L4 133 aa20.91■□□□□ 0.94
UBXN1-208ENST00000527421 ZSWIM4Q9H7M6 989 aa20.91■□□□□ 0.94
UBXN1-208ENST00000527421 ERVK-5Q9HDB9 667 aa20.91■□□□□ 0.94
UBXN1-208ENST00000527421 CYP26B1Q9NR63 512 aa20.91■□□□□ 0.94
UBXN1-208ENST00000527421 RGL1Q9NZL6 768 aa20.91■□□□□ 0.94
UBXN1-208ENST00000527421 WRAP73Q9P2S5 460 aaPredicted RBP20.91■□□□□ 0.94
UBXN1-208ENST00000527421 GPR182O15218 404 aa20.9■□□□□ 0.94
UBXN1-208ENST00000527421 DNM2P50570 870 aa20.9■□□□□ 0.94
UBXN1-208ENST00000527421 CTTNQ14247 550 aaKnown RBP20.9■□□□□ 0.94
UBXN1-208ENST00000527421 SPRED2Q7Z698 418 aa20.9■□□□□ 0.94
UBXN1-208ENST00000527421 TGS1Q96RS0 853 aaKnown RBP20.9■□□□□ 0.94
UBXN1-208ENST00000527421 TMX1Q9H3N1 280 aa20.9■□□□□ 0.94
UBXN1-208ENST00000527421 PPME1Q9Y570 386 aa20.9■□□□□ 0.94
UBXN1-208ENST00000527421 IGKV6-21A0A0C4DH24 114 aa20.89■□□□□ 0.93
UBXN1-208ENST00000527421 EPOPA6NHQ4 379 aa20.89■□□□□ 0.93
UBXN1-208ENST00000527421 MAFO75444 373 aaPredicted RBP20.89■□□□□ 0.93
UBXN1-208ENST00000527421 OR52Z1P0C646 297 aa20.89■□□□□ 0.93
UBXN1-208ENST00000527421 U2AF2P26368 475 aaKnown RBP eCLIP20.89■□□□□ 0.935e-8■■■□□ 16.8
UBXN1-208ENST00000527421 GJB2P29033 226 aa20.89■□□□□ 0.93
UBXN1-208ENST00000527421 YWHABP31946 246 aaKnown RBP20.89■□□□□ 0.93
UBXN1-208ENST00000527421 GPC3P51654 580 aa20.89■□□□□ 0.93
UBXN1-208ENST00000527421 ZNF174Q15697 407 aa20.89■□□□□ 0.93
UBXN1-208ENST00000527421 FAM228AQ86W67 206 aa20.89■□□□□ 0.93
UBXN1-208ENST00000527421 TPH2Q8IWU9 490 aa20.89■□□□□ 0.93
UBXN1-208ENST00000527421 SLC7A3Q8WY07 619 aa20.89■□□□□ 0.93
UBXN1-208ENST00000527421 CEP170P1Q96L14 293 aa20.89■□□□□ 0.93
UBXN1-208ENST00000527421 EIF2AK1Q9BQI3 630 aaKnown RBP20.89■□□□□ 0.93
UBXN1-208ENST00000527421 ADAMTS10Q9H324 1103 aa20.89■□□□□ 0.93
UBXN1-208ENST00000527421 MTUS1Q9ULD2 1270 aa20.89■□□□□ 0.93
UBXN1-208ENST00000527421 ST3GAL5Q9UNP4 418 aa20.89■□□□□ 0.93
UBXN1-208ENST00000527421 SMC3Q9UQE7 1217 aa20.89■□□□□ 0.93
UBXN1-208ENST00000527421 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.89■□□□□ 0.93
UBXN1-208ENST00000527421 NLRC5Q86WI3 1866 aa20.89■□□□□ 0.93
UBXN1-208ENST00000527421 CHD7Q9P2D1 2997 aa20.89■□□□□ 0.93
UBXN1-208ENST00000527421 RALGAPA2Q2PPJ7 1873 aa20.88■□□□□ 0.93
UBXN1-208ENST00000527421 POTEMA6NI47 508 aa20.88■□□□□ 0.93
UBXN1-208ENST00000527421 RFXAPO00287 272 aa20.88■□□□□ 0.93
UBXN1-208ENST00000527421 POLGP54098 1239 aaPredicted RBP20.88■□□□□ 0.93
UBXN1-208ENST00000527421 NPEPPSP55786 919 aa20.88■□□□□ 0.93
UBXN1-208ENST00000527421 ERVK-21P61565 698 aa20.88■□□□□ 0.93
UBXN1-208ENST00000527421 DRP2Q13474 957 aa20.88■□□□□ 0.93
UBXN1-208ENST00000527421 OTUD6AQ7L8S5 288 aa20.88■□□□□ 0.93
UBXN1-208ENST00000527421 NLRP7Q8WX94 980 aa20.88■□□□□ 0.93
UBXN1-208ENST00000527421 ZNF668Q96K58 619 aaPredicted RBP20.88■□□□□ 0.93
UBXN1-208ENST00000527421 ADGRA3Q8IWK6 1321 aa20.87■□□□□ 0.93
UBXN1-208ENST00000527421 DENND3A2RUS2 1198 aa20.87■□□□□ 0.93
UBXN1-208ENST00000527421 H3BQV1 296 aa20.87■□□□□ 0.93
UBXN1-208ENST00000527421 GTPBP6O43824 516 aaPredicted RBP20.87■□□□□ 0.93
UBXN1-208ENST00000527421 SLITRK3O94933 977 aa20.87■□□□□ 0.93
UBXN1-208ENST00000527421 EIF4BP23588 611 aaKnown RBP20.87■□□□□ 0.93
UBXN1-208ENST00000527421 RFC5P40937 340 aa20.87■□□□□ 0.93
UBXN1-208ENST00000527421 CDC42EP1Q00587 391 aa20.87■□□□□ 0.93
UBXN1-208ENST00000527421 MCTP1Q6DN14 999 aa20.87■□□□□ 0.93
UBXN1-208ENST00000527421 RTN4RL1Q86UN2 441 aaPredicted RBP20.87■□□□□ 0.93
UBXN1-208ENST00000527421 NPAS4Q8IUM7 802 aa20.87■□□□□ 0.93
UBXN1-208ENST00000527421 EXOC8Q8IYI6 725 aa20.87■□□□□ 0.93
UBXN1-208ENST00000527421 HSD17B14Q9BPX1 270 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms